RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 MMP9P14780 707 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 CCL3L1P16619 93 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 AADACP22760 399 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 PRTN3P24158 256 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 IL2RGP31785 369 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 ZNF137PP52743 207 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 UBE2MP61081 183 aaKnown RBP6.68□□□□□ -1.34
NPHP3-204ENST00000469232 RND3P61587 244 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 PAX8Q06710 450 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 GNMTQ14749 295 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 Q5PR19 223 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 ENKURQ8TC29 256 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 TNFRSF14Q92956 283 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 ZNF486Q96H40 463 aaPredicted RBP6.68□□□□□ -1.34
NPHP3-204ENST00000469232 SCGB3A2Q96PL1 93 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 ZNF2Q9BSG1 426 aaPredicted RBP6.68□□□□□ -1.34
NPHP3-204ENST00000469232 RTBDNQ9BSG5 229 aaPredicted RBP6.68□□□□□ -1.34
NPHP3-204ENST00000469232 RSRP1Q9BUV0 290 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 PARP12Q9H0J9 701 aaKnown RBP6.68□□□□□ -1.34
NPHP3-204ENST00000469232 SIRPDQ9H106 197 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 GHITMQ9H3K2 345 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 C5orf66Q9H5L9 145 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 RDH8Q9NYR8 311 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 VSIG4Q9Y279 399 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 MAP1AP78559 2803 aaPredicted RBP6.68□□□□□ -1.34
NPHP3-204ENST00000469232 AKAP9Q99996 3911 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 A0A0B4J293 547 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 BET1O15155 118 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 SLC22A5O76082 557 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 RGS11O94810 467 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 IGLV1-47P01700 117 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 IGHV1-8P0DP01 117 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 NFYAP23511 347 aaPredicted RBP6.67□□□□□ -1.34
NPHP3-204ENST00000469232 GNRHRP30968 328 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 CEACAM6P40199 344 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 TRIM16LQ309B1 348 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 UTF1Q5T230 341 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 LPCAT3Q6P1A2 487 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 PLET1Q6UQ28 207 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 SHISA2Q6UWI4 295 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 SLC25A48Q6ZT89 311 aaKnown RBP6.67□□□□□ -1.34
NPHP3-204ENST00000469232 SLC25A42Q86VD7 318 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 GLCCI1Q86VQ1 547 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 FAM185AQ8N0U4 392 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 ZBTB34Q8NCN2 500 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 BVESQ8NE79 360 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 OR11H6Q8NGC7 330 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 OR52L2PQ8NGH6 319 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 RFESDQ8TAC1 157 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 H1FXQ92522 213 aaKnown RBP6.67□□□□□ -1.34
NPHP3-204ENST00000469232 REG4Q9BYZ8 158 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 C20orf85Q9H1P6 137 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 OR2S2Q9NQN1 319 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 TPSG1Q9NRR2 321 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 MCUBQ9NWR8 336 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 ING3Q9NXR8 418 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 ZNF69Q9UC07 566 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 INSIG2Q9Y5U4 225 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 SESN1Q9Y6P5 492 aa6.67□□□□□ -1.34
NPHP3-204ENST00000469232 VPS13CQ709C8 3753 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 CREBBPQ92793 2442 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 INMT-MINDY4F8WBC2 141 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 PRAF2O60831 178 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 PROP1O75360 226 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 PEX14O75381 377 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 H2AFB2P0C5Z0 115 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 PPP1CCP36873 323 aaKnown RBP6.66□□□□□ -1.34
NPHP3-204ENST00000469232 ZNF134P52741 427 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 TSPAN5P62079 268 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 CT45A1Q5HYN5 189 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 PRAMEF5Q5TYX0 476 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 HCP5Q6MZN7 132 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 FAM53AQ6NSI3 398 aaPredicted RBP6.66□□□□□ -1.34
NPHP3-204ENST00000469232 ODF3L1Q8IXM7 274 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 SLC38A6Q8IZM9 456 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.66□□□□□ -1.34
NPHP3-204ENST00000469232 BEND2Q8NDZ0 799 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 OR10V1Q8NGI7 309 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 CT45A3Q8NHU0 189 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 ZFAND1Q8TCF1 268 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 MARCH1Q8TCQ1 289 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 ST6GALNAC6Q969X2 333 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 TMEM230Q96A57 120 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 C5orf30Q96GV9 206 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 AKR1E2Q96JD6 320 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 ZNF251Q9BRH9 671 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 GINS4Q9BRT9 223 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 IFI27L2Q9H2X8 130 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 NARFLQ9H6Q4 476 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 METTL8Q9H825 291 aaKnown RBP6.66□□□□□ -1.34
NPHP3-204ENST00000469232 MMP26Q9NRE1 261 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 NUDT15Q9NV35 164 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.66□□□□□ -1.347e-9■■■■□ 26.1
NPHP3-204ENST00000469232 MED13LQ71F56 2210 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 ITPR3Q14573 2671 aa6.66□□□□□ -1.34
NPHP3-204ENST00000469232 CR1P17927 2039 aa6.65□□□□□ -1.34
NPHP3-204ENST00000469232 TRAV20A0A0B4J274 112 aa6.65□□□□□ -1.34
NPHP3-204ENST00000469232 hCG_1809904A0A1W2PP81 198 aa6.65□□□□□ -1.34
NPHP3-204ENST00000469232 A0A1W2PPE2 198 aa6.65□□□□□ -1.34
NPHP3-204ENST00000469232 A0A1W2PR64 198 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms