RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 NF1P21359 2839 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 IGKV1-6A0A0C4DH72 117 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 FAM25AB3EWG3 89 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 FAM25CB3EWG5 89 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 FAM25GB3EWG6 89 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 H3BUX3 64 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 HSPA12AO43301 675 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 HLA-DQB1P01920 261 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 PTHLHP12272 177 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 IL3RAP26951 378 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 CEACAM6P40199 344 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 DYNLT3P51808 116 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 TAS2R20P59543 309 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 HERPUD1Q15011 391 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 KRTAP24-1Q3LI83 254 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 PLA1AQ53H76 456 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 CCDC144NLQ6NUI1 221 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 PIFOQ8TCI5 191 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 TMEM158Q8WZ71 300 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 CABLES2Q9BTV7 478 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 ABHD14AQ9BUJ0 271 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 CHIAQ9BZP6 476 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 ABCB10Q9NRK6 738 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 SLC23A1Q9UHI7 598 aa9.64□□□□□ -0.87
VPS13D-204ENST00000469054 IGKV1D-8A0A087WSZ0 117 aa9.63□□□□□ -0.87
VPS13D-204ENST00000469054 CTDSP2O14595 271 aa9.63□□□□□ -0.87
VPS13D-204ENST00000469054 ITGB1BP1O14713 200 aa9.63□□□□□ -0.87
VPS13D-204ENST00000469054 DIRAS3O95661 229 aa9.63□□□□□ -0.87
VPS13D-204ENST00000469054 RAB13P51153 203 aa9.63□□□□□ -0.87
VPS13D-204ENST00000469054 ARHGDIBP52566 201 aa9.63□□□□□ -0.87
VPS13D-204ENST00000469054 ZNF137PP52743 207 aa9.63□□□□□ -0.87
VPS13D-204ENST00000469054 DIAPH2-AS1Q14236 149 aa9.63□□□□□ -0.87
VPS13D-204ENST00000469054 IGSF11Q5DX21 431 aa9.63□□□□□ -0.87
VPS13D-204ENST00000469054 OR2AK2Q8NG84 335 aa9.63□□□□□ -0.87
VPS13D-204ENST00000469054 TOMM40LQ969M1 308 aa9.63□□□□□ -0.87
VPS13D-204ENST00000469054 ST6GALNAC6Q969X2 333 aa9.63□□□□□ -0.87
VPS13D-204ENST00000469054 SLIRPQ9GZT3 109 aaKnown RBP9.63□□□□□ -0.87
VPS13D-204ENST00000469054 TOLLIPQ9H0E2 274 aa9.63□□□□□ -0.87
VPS13D-204ENST00000469054 NDUFA13Q9P0J0 144 aa9.63□□□□□ -0.87
VPS13D-204ENST00000469054 OR1A1Q9P1Q5 309 aa9.63□□□□□ -0.87
VPS13D-204ENST00000469054 VPREB3Q9UKI3 123 aa9.63□□□□□ -0.87
VPS13D-204ENST00000469054 MRPS7Q9Y2R9 242 aaKnown RBP9.63□□□□□ -0.87
VPS13D-204ENST00000469054 TRBV6-7A0A0A0MS04 114 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 DPPA5A6NC42 116 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 RNF212BA8MTL3 300 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 BET1O15155 118 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 RGS5O15539 181 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 GAPDHP04406 335 aaKnown RBP9.62□□□□□ -0.87
VPS13D-204ENST00000469054 CTXN2P0C2S0 81 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 BRS3P32247 399 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 CBX5P45973 191 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 RAB7AP51149 207 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 ZNF816Q0VGE8 651 aaPredicted RBP9.62□□□□□ -0.87
VPS13D-204ENST00000469054 LY6EQ16553 131 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 HOGA1Q86XE5 327 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 ODF3L1Q8IXM7 274 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 OR8H3Q8N146 312 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 LYG1Q8N1E2 194 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 GVQW1Q8N7I0 195 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.62□□□□□ -0.87
VPS13D-204ENST00000469054 OR10J5Q8NHC4 309 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 EDARADDQ8WWZ3 215 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 DCUN1D5Q9BTE7 237 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 PARP12Q9H0J9 701 aaKnown RBP9.62□□□□□ -0.87
VPS13D-204ENST00000469054 MIXL1Q9H2W2 232 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 RDH8Q9NYR8 311 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 EXTL2Q9UBQ6 330 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 ANXA10Q9UJ72 324 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 ADAM30Q9UKF2 790 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 TCF19Q9Y242 345 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 MXRA5Q9NR99 2828 aa9.62□□□□□ -0.87
VPS13D-204ENST00000469054 A0A1W2PPI3 338 aa9.61□□□□□ -0.87
VPS13D-204ENST00000469054 FAM181BA6NEQ2 426 aa9.61□□□□□ -0.87
VPS13D-204ENST00000469054 HSD17B6O14756 317 aa9.61□□□□□ -0.87
VPS13D-204ENST00000469054 ST8SIA5O15466 376 aa9.61□□□□□ -0.87
VPS13D-204ENST00000469054 GPR137BO60478 399 aa9.61□□□□□ -0.87
VPS13D-204ENST00000469054 TPPPO94811 219 aa9.61□□□□□ -0.87
VPS13D-204ENST00000469054 PRSS3P35030 304 aa9.61□□□□□ -0.87
VPS13D-204ENST00000469054 RPL15P61313 204 aaKnown RBP9.61□□□□□ -0.87
VPS13D-204ENST00000469054 CNIH2Q6PI25 160 aa9.61□□□□□ -0.87
VPS13D-204ENST00000469054 SNX29P2Q8IUI4 249 aa9.61□□□□□ -0.87
VPS13D-204ENST00000469054 LAX1Q8IWV1 398 aa9.61□□□□□ -0.87
VPS13D-204ENST00000469054 BEST4Q8NFU0 473 aa9.61□□□□□ -0.87
VPS13D-204ENST00000469054 DGCR14Q96DF8 476 aaKnown RBP9.61□□□□□ -0.87
VPS13D-204ENST00000469054 MDFIQ99750 246 aa9.61□□□□□ -0.87
VPS13D-204ENST00000469054 AGMATQ9BSE5 352 aa9.61□□□□□ -0.87
VPS13D-204ENST00000469054 C19orf24Q9BVV8 132 aa9.61□□□□□ -0.87
VPS13D-204ENST00000469054 C6orf62Q9GZU0 229 aaPredicted RBP9.61□□□□□ -0.87
VPS13D-204ENST00000469054 NXF2Q9GZY0 626 aaKnown RBP9.61□□□□□ -0.87
VPS13D-204ENST00000469054 C11orf54Q9H0W9 315 aaPredicted RBP9.61□□□□□ -0.87
VPS13D-204ENST00000469054 IFI27L2Q9H2X8 130 aa9.61□□□□□ -0.87
VPS13D-204ENST00000469054 PIPOXQ9P0Z9 390 aa9.61□□□□□ -0.87
VPS13D-204ENST00000469054 IGHV1-3A0A0C4DH29 117 aa9.6□□□□□ -0.87
VPS13D-204ENST00000469054 MEIS3P1A6NDR6 274 aa9.6□□□□□ -0.87
VPS13D-204ENST00000469054 A6NDX4 124 aa9.6□□□□□ -0.87
VPS13D-204ENST00000469054 FAM90A9PA6NNJ1 464 aa9.6□□□□□ -0.87
VPS13D-204ENST00000469054 TIMM23O14925 209 aa9.6□□□□□ -0.87
VPS13D-204ENST00000469054 TXNL1O43396 289 aa9.6□□□□□ -0.87
VPS13D-204ENST00000469054 CRYBA1P05813 215 aa9.6□□□□□ -0.87
VPS13D-204ENST00000469054 LPLP06858 475 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms