RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 DUX4L4P0CJ87 422 aa6.9□□□□□ -1.3
BRCA1-208ENST00000468300 DUX4L5P0CJ88 424 aa6.9□□□□□ -1.3
BRCA1-208ENST00000468300 DUX4L6P0CJ89 424 aa6.9□□□□□ -1.3
BRCA1-208ENST00000468300 DUX4L7P0CJ90 424 aa6.9□□□□□ -1.3
BRCA1-208ENST00000468300 GLRA1P23415 457 aa6.9□□□□□ -1.3
BRCA1-208ENST00000468300 OR3A1P47881 315 aa6.9□□□□□ -1.3
BRCA1-208ENST00000468300 CCL8P80075 99 aa6.9□□□□□ -1.3
BRCA1-208ENST00000468300 DUX4L9Q6RFH8 374 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-208ENST00000468300 ADAD2Q8NCV1 583 aaKnown RBP6.9□□□□□ -1.3
BRCA1-208ENST00000468300 PIK3IP1Q96FE7 263 aa6.9□□□□□ -1.3
BRCA1-208ENST00000468300 RTBDNQ9BSG5 229 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-208ENST00000468300 MYOZ1Q9NP98 299 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-208ENST00000468300 CISD1Q9NZ45 108 aaKnown RBP6.9□□□□□ -1.3
BRCA1-208ENST00000468300 DUX4Q9UBX2 424 aa6.9□□□□□ -1.3
BRCA1-208ENST00000468300 IGHV3OR15-7A0A075B7D8 119 aa6.9□□□□□ -1.31
BRCA1-208ENST00000468300 TNFRSF13BO14836 293 aaPredicted RBP6.9□□□□□ -1.31
BRCA1-208ENST00000468300 IFNA4P05014 189 aa6.9□□□□□ -1.31
BRCA1-208ENST00000468300 S100A8P05109 93 aa6.9□□□□□ -1.31
BRCA1-208ENST00000468300 SCTP09683 121 aa6.9□□□□□ -1.31
BRCA1-208ENST00000468300 RPA2P15927 270 aa6.9□□□□□ -1.31
BRCA1-208ENST00000468300 RCC1P18754 421 aaPredicted RBP6.9□□□□□ -1.31
BRCA1-208ENST00000468300 NUTF2P61970 127 aaKnown RBP6.9□□□□□ -1.31
BRCA1-208ENST00000468300 PAX5Q02548 391 aa6.9□□□□□ -1.31
BRCA1-208ENST00000468300 MZT1Q08AG7 82 aa6.9□□□□□ -1.31
BRCA1-208ENST00000468300 ZFP69Q49AA0 526 aa6.9□□□□□ -1.31
BRCA1-208ENST00000468300 C11orf71Q6IPW1 123 aa6.9□□□□□ -1.31
BRCA1-208ENST00000468300 FOXRED2Q8IWF2 684 aa6.9□□□□□ -1.31
BRCA1-208ENST00000468300 ARRDC1Q8N5I2 433 aa6.9□□□□□ -1.31
BRCA1-208ENST00000468300 TERB2Q8NHR7 220 aa6.9□□□□□ -1.31
BRCA1-208ENST00000468300 TMEM230Q96A57 120 aa6.9□□□□□ -1.31
BRCA1-208ENST00000468300 MISP3Q96FF7 219 aa6.9□□□□□ -1.31
BRCA1-208ENST00000468300 TMPRSS13Q9BYE2 586 aa6.9□□□□□ -1.31
BRCA1-208ENST00000468300 C5orf66Q9H5L9 145 aa6.9□□□□□ -1.31
BRCA1-208ENST00000468300 MBNL3Q9NUK0 354 aaKnown RBP6.9□□□□□ -1.31
BRCA1-208ENST00000468300 WIPI2Q9Y4P8 454 aa6.9□□□□□ -1.31
BRCA1-208ENST00000468300 DSCAML1Q8TD84 2053 aa6.9□□□□□ -1.31
BRCA1-208ENST00000468300 CACNA1BQ00975 2339 aa6.9□□□□□ -1.31
BRCA1-208ENST00000468300 MCRIP1C9JLW8 97 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 SH2D1BO14796 132 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 PF4P02776 101 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 IL5P05113 134 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 LINC00614P0C842 121 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 CXCL3P19876 107 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 TAS2R46P59540 309 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 RRAS2P62070 204 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-208ENST00000468300 COL10A1Q03692 680 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 C2orf68Q2NKX9 166 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 SCGB2B2Q4G0G5 96 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 FAM90A1Q86YD7 464 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 OR5H2Q8NGV7 314 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 CORO2AQ92828 525 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 PRRT1Q99946 306 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 SLC25A21Q9BQT8 299 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-208ENST00000468300 VPS25Q9BRG1 176 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 C2orf88Q9BSF0 95 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 PDCD10Q9BUL8 212 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 RALYQ9UKM9 306 aaKnown RBP6.89□□□□□ -1.31
BRCA1-208ENST00000468300 GPR132Q9UNW8 380 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 ZFYVE26Q68DK2 2539 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 TRAV39A0A0B4J263 110 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 DISC1C4P0D8 188 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 IFNL4K9M1U5 179 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 TRAPPC2P0DI81 140 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 TRAPPC2BP0DI82 140 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 ZNF44P15621 663 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 HERV-K104P63124 156 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 BAMBIQ13145 260 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 TEX36Q5VZQ5 186 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 ZNF626Q68DY1 528 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 STUMQ69YW2 141 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 FAHD2BQ6P2I3 314 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-208ENST00000468300 MARCH1Q8TCQ1 289 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 FAHD2AQ96GK7 314 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 RNF2Q99496 336 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 EHFQ9NZC4 300 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 OR14J1Q9UGF5 321 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 EPG5Q9HCE0 2579 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 M0R233 179 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 LGALS8O00214 317 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 TNFRSF1AP19438 455 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 PRDX2P32119 198 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 CD80P33681 288 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 DHODHQ02127 395 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 ATXN7L3Q14CW9 347 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-208ENST00000468300 SLC25A42Q86VD7 318 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 ZDHHC22Q8N966 263 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 GLMPQ8WWB7 406 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 WDR89Q96FK6 387 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-208ENST00000468300 PERPQ96FX8 193 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 FXYD6Q9H0Q3 95 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 OR51J1Q9H342 316 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 GEMIN7Q9H840 131 aaKnown RBP6.89□□□□□ -1.31
BRCA1-208ENST00000468300 MAB21L2Q9Y586 359 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 ANKHD1Q8IWZ3 2542 aaKnown RBP6.89□□□□□ -1.31
BRCA1-208ENST00000468300 ICE1Q9Y2F5 2266 aa6.89□□□□□ -1.31
BRCA1-208ENST00000468300 SULT1A3P0DMM9 295 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 SULT1A4P0DMN0 295 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 KCNJ3P48549 501 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 SUPT4H1P63272 117 aaKnown RBP6.88□□□□□ -1.31
BRCA1-208ENST00000468300 FCN2Q15485 313 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms