RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 A0A1W2PPI3 338 aa16.06■□□□□ 0.16
NPHP4-206ENST00000468253 TXNL1O43396 289 aa16.06■□□□□ 0.16
NPHP4-206ENST00000468253 GABARAPO95166 117 aa16.06■□□□□ 0.16
NPHP4-206ENST00000468253 LPLP06858 475 aa16.06■□□□□ 0.16
NPHP4-206ENST00000468253 MDKP21741 143 aaPredicted RBP16.06■□□□□ 0.16
NPHP4-206ENST00000468253 DTYMKP23919 212 aa16.06■□□□□ 0.16
NPHP4-206ENST00000468253 ZBTB25P24278 435 aa16.06■□□□□ 0.16
NPHP4-206ENST00000468253 PPP1CCP36873 323 aaKnown RBP16.06■□□□□ 0.16
NPHP4-206ENST00000468253 TALDO1P37837 337 aa16.06■□□□□ 0.16
NPHP4-206ENST00000468253 SERPINB10P48595 397 aa16.06■□□□□ 0.16
NPHP4-206ENST00000468253 VBP1P61758 197 aa16.06■□□□□ 0.16
NPHP4-206ENST00000468253 NCS1P62166 190 aa16.06■□□□□ 0.16
NPHP4-206ENST00000468253 KIR2DS1Q14954 304 aa16.06■□□□□ 0.16
NPHP4-206ENST00000468253 CTF1Q16619 201 aa16.06■□□□□ 0.16
NPHP4-206ENST00000468253 ZNF260Q3ZCT1 412 aa16.06■□□□□ 0.16
NPHP4-206ENST00000468253 OR4A4PQ8NGN8 299 aa16.06■□□□□ 0.16
NPHP4-206ENST00000468253 IL1F10Q8WWZ1 152 aa16.06■□□□□ 0.16
NPHP4-206ENST00000468253 TAF15Q92804 592 aaKnown RBP eCLIP16.06■□□□□ 0.16
NPHP4-206ENST00000468253 AKR1E2Q96JD6 320 aa16.06■□□□□ 0.16
NPHP4-206ENST00000468253 TOLLIPQ9H0E2 274 aa16.06■□□□□ 0.16
NPHP4-206ENST00000468253 DCSTAMPQ9H295 470 aa16.06■□□□□ 0.16
NPHP4-206ENST00000468253 DIABLOQ9NR28 239 aa16.06■□□□□ 0.16
NPHP4-206ENST00000468253 HSD17B6O14756 317 aa16.05■□□□□ 0.16
NPHP4-206ENST00000468253 TIMM23O14925 209 aa16.05■□□□□ 0.16
NPHP4-206ENST00000468253 SLC31A2O15432 143 aa16.05■□□□□ 0.16
NPHP4-206ENST00000468253 LANCL1O43813 399 aa16.05■□□□□ 0.16
NPHP4-206ENST00000468253 CHST1O43916 411 aa16.05■□□□□ 0.16
NPHP4-206ENST00000468253 FCGR3AP08637 254 aa16.05■□□□□ 0.16
NPHP4-206ENST00000468253 SCTP09683 121 aa16.05■□□□□ 0.16
NPHP4-206ENST00000468253 ARFRP1Q13795 201 aa16.05■□□□□ 0.16
NPHP4-206ENST00000468253 EBI3Q14213 229 aa16.05■□□□□ 0.16
NPHP4-206ENST00000468253 DIAPH2-AS1Q14236 149 aa16.05■□□□□ 0.16
NPHP4-206ENST00000468253 GPR107Q5VW38 600 aa16.05■□□□□ 0.16
NPHP4-206ENST00000468253 C11orf88Q6PI97 169 aa16.05■□□□□ 0.16
NPHP4-206ENST00000468253 DRAM1Q8N682 238 aa16.05■□□□□ 0.16
NPHP4-206ENST00000468253 OR4C13Q8NGP0 309 aa16.05■□□□□ 0.16
NPHP4-206ENST00000468253 RTN4IP1Q8WWV3 396 aaPredicted RBP16.05■□□□□ 0.16
NPHP4-206ENST00000468253 CFHR4Q92496 578 aa16.05■□□□□ 0.16
NPHP4-206ENST00000468253 SLC25A38Q96DW6 304 aa16.05■□□□□ 0.16
NPHP4-206ENST00000468253 CMTM3Q96MX0 182 aa16.05■□□□□ 0.16
NPHP4-206ENST00000468253 RBM14Q96PK6 669 aaKnown RBP16.05■□□□□ 0.16
NPHP4-206ENST00000468253 ABHD14AQ9BUJ0 271 aa16.05■□□□□ 0.16
NPHP4-206ENST00000468253 A0A075B6Q4 140 aa16.04■□□□□ 0.16
NPHP4-206ENST00000468253 IGHV1-3A0A0C4DH29 117 aa16.04■□□□□ 0.16
NPHP4-206ENST00000468253 OR2F2O95006 317 aa16.04■□□□□ 0.16
NPHP4-206ENST00000468253 CEACAM6P40199 344 aa16.04■□□□□ 0.16
NPHP4-206ENST00000468253 RPL5P46777 297 aaKnown RBP16.04■□□□□ 0.16
NPHP4-206ENST00000468253 RORCP51449 518 aa16.04■□□□□ 0.16
NPHP4-206ENST00000468253 GNMTQ14749 295 aa16.04■□□□□ 0.16
NPHP4-206ENST00000468253 Q8N2B8 174 aa16.04■□□□□ 0.16
NPHP4-206ENST00000468253 OR2AK2Q8NG84 335 aa16.04■□□□□ 0.16
NPHP4-206ENST00000468253 CAPSLQ8WWF8 208 aa16.04■□□□□ 0.16
NPHP4-206ENST00000468253 EDARADDQ8WWZ3 215 aa16.04■□□□□ 0.16
NPHP4-206ENST00000468253 ACOT12Q8WYK0 555 aa16.04■□□□□ 0.16
NPHP4-206ENST00000468253 S100A16Q96FQ6 103 aaKnown RBP16.04■□□□□ 0.16
NPHP4-206ENST00000468253 RNF114Q9Y508 228 aa16.04■□□□□ 0.16
NPHP4-206ENST00000468253 M0QZK8 103 aa16.03■□□□□ 0.16
NPHP4-206ENST00000468253 FABP7O15540 132 aa16.03■□□□□ 0.16
NPHP4-206ENST00000468253 CD1BP29016 333 aa16.03■□□□□ 0.16
NPHP4-206ENST00000468253 SHISA2Q6UWI4 295 aa16.03■□□□□ 0.16
NPHP4-206ENST00000468253 TMEM219Q86XT9 240 aa16.03■□□□□ 0.16
NPHP4-206ENST00000468253 TGIF2LXQ8IUE1 241 aa16.03■□□□□ 0.16
NPHP4-206ENST00000468253 AGMATQ9BSE5 352 aa16.03■□□□□ 0.16
NPHP4-206ENST00000468253 PRSS22Q9GZN4 317 aa16.03■□□□□ 0.16
NPHP4-206ENST00000468253 NAA50Q9GZZ1 169 aaKnown RBP16.03■□□□□ 0.16
NPHP4-206ENST00000468253 PIPOXQ9P0Z9 390 aa16.03■□□□□ 0.16
NPHP4-206ENST00000468253 SLC23A1Q9UHI7 598 aa16.03■□□□□ 0.16
NPHP4-206ENST00000468253 IGKV1-6A0A0C4DH72 117 aa16.02■□□□□ 0.16
NPHP4-206ENST00000468253 HSPA12AO43301 675 aa16.02■□□□□ 0.16
NPHP4-206ENST00000468253 XRCC3O43542 346 aa16.02■□□□□ 0.16
NPHP4-206ENST00000468253 CD24P25063 80 aa16.02■□□□□ 0.16
NPHP4-206ENST00000468253 PROK1P58294 105 aa16.02■□□□□ 0.16
NPHP4-206ENST00000468253 FAM71F2Q6NXP2 309 aa16.02■□□□□ 0.16
NPHP4-206ENST00000468253 MOB3BQ86TA1 216 aa16.02■□□□□ 0.16
NPHP4-206ENST00000468253 ODF3L1Q8IXM7 274 aa16.02■□□□□ 0.16
NPHP4-206ENST00000468253 LYG1Q8N1E2 194 aa16.02■□□□□ 0.16
NPHP4-206ENST00000468253 OR56B4Q8NH76 319 aa16.02■□□□□ 0.16
NPHP4-206ENST00000468253 BCL7BQ9BQE9 202 aa16.02■□□□□ 0.16
NPHP4-206ENST00000468253 CABLES2Q9BTV7 478 aa16.02■□□□□ 0.16
NPHP4-206ENST00000468253 TRAV18A0A075B6X5 111 aa16.01■□□□□ 0.15
NPHP4-206ENST00000468253 TRBV6-7A0A0A0MS04 114 aa16.01■□□□□ 0.15
NPHP4-206ENST00000468253 RAB29O14966 203 aa16.01■□□□□ 0.15
NPHP4-206ENST00000468253 SNRNP70P08621 437 aaKnown RBP16.01■□□□□ 0.15
NPHP4-206ENST00000468253 CTXN2P0C2S0 81 aa16.01■□□□□ 0.15
NPHP4-206ENST00000468253 GSTT2P0CG29 244 aa16.01■□□□□ 0.15
NPHP4-206ENST00000468253 GSTT2BP0CG30 244 aa16.01■□□□□ 0.15
NPHP4-206ENST00000468253 UBE2NLQ5JXB2 153 aa16.01■□□□□ 0.15
NPHP4-206ENST00000468253 IZUMO1Q8IYV9 350 aa16.01■□□□□ 0.15
NPHP4-206ENST00000468253 OR2T6Q8NHC8 308 aa16.01■□□□□ 0.15
NPHP4-206ENST00000468253 C11orf54Q9H0W9 315 aaPredicted RBP16.01■□□□□ 0.15
NPHP4-206ENST00000468253 ZNF230Q9UIE0 474 aaPredicted RBP16.01■□□□□ 0.15
NPHP4-206ENST00000468253 ELF5Q9UKW6 265 aaPredicted RBP16.01■□□□□ 0.15
NPHP4-206ENST00000468253 REG1BP48304 166 aa16■□□□□ 0.15
NPHP4-206ENST00000468253 TMBIM6P55061 237 aa16■□□□□ 0.15
NPHP4-206ENST00000468253 GNG2P59768 71 aa16■□□□□ 0.15
NPHP4-206ENST00000468253 ZNF833PQ6ZTB9 187 aa16■□□□□ 0.15
NPHP4-206ENST00000468253 OR10J5Q8NHC4 309 aa16■□□□□ 0.15
NPHP4-206ENST00000468253 S1PR3Q99500 378 aa16■□□□□ 0.15
NPHP4-206ENST00000468253 SLC25A33Q9BSK2 321 aa16■□□□□ 0.15
NPHP4-206ENST00000468253 IFI27L2Q9H2X8 130 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms