RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 ZNF680Q8NEM1 530 aa2.29□□□□□ -2.04
SMC4-208ENST00000467468 TMBIM1Q969X1 311 aa2.29□□□□□ -2.04
SMC4-208ENST00000467468 KCNIP2Q9NS61 270 aa2.29□□□□□ -2.04
SMC4-208ENST00000467468 SVILO95425 2214 aa2.29□□□□□ -2.04
SMC4-208ENST00000467468 BRWD3Q6RI45 1802 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 TRBV24-1A0A075B6N3 115 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 A0A0B4J2C4 111 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 A6NED7 52 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 M0R036 132 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 ACOX3O15254 700 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 IL6P05231 212 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 IL3P08700 152 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 OR12D1P0DN82 309 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 CTLA4P16410 223 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 RPS12P25398 132 aaKnown RBP2.28□□□□□ -2.04
SMC4-208ENST00000467468 HSPA9P38646 679 aaKnown RBP2.28□□□□□ -2.04
SMC4-208ENST00000467468 OR1E2P47887 323 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 TMEM267Q0VDI3 215 aaPredicted RBP2.28□□□□□ -2.04
SMC4-208ENST00000467468 PDGFRLQ15198 375 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 C10orf91Q5T1B1 145 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 C1orf64Q8NEQ6 169 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 OR11G2Q8NGC1 345 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 ABHD14BQ96IU4 210 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 MRPS26Q9BYN8 205 aaKnown RBP2.28□□□□□ -2.04
SMC4-208ENST00000467468 OR5V1Q9UGF6 321 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 GUCA1BQ9UMX6 200 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 POLR1DQ9Y2S0 133 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 HDGFL3Q9Y3E1 203 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 LINC00588Q9Y4M8 146 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 PHLDA3Q9Y5J5 127 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 U3KQK5 164 aa2.28□□□□□ -2.04
SMC4-208ENST00000467468 K7EQS6 105 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 SH2D1AO60880 128 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 DCTN3O75935 186 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 IGLV3-27P01718 113 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 CALB1P05937 261 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 OR4A8P0C604 315 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 ZNF7P17097 686 aaPredicted RBP2.27□□□□□ -2.05
SMC4-208ENST00000467468 CDK2P24941 298 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 DDTP30046 118 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 GABRA3P34903 492 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 KLF3P57682 345 aaPredicted RBP2.27□□□□□ -2.05
SMC4-208ENST00000467468 LINC00313P59037 77 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 ACTBP60709 375 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 RPS11P62280 158 aaKnown RBP eCLIP2.27□□□□□ -2.058e-17■■■■■ 578.9
SMC4-208ENST00000467468 RPS24P62847 133 aaKnown RBP2.27□□□□□ -2.05
SMC4-208ENST00000467468 ACTG1P63261 375 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 FABP5Q01469 135 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 FLI1Q01543 452 aaPredicted RBP2.27□□□□□ -2.05
SMC4-208ENST00000467468 PDK2Q15119 407 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 IGFBP7Q16270 282 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 ACSBG2Q5FVE4 666 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 CLVS2Q5SYC1 327 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 PRR9Q5T870 116 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 ZNF660Q6AZW8 331 aaPredicted RBP2.27□□□□□ -2.05
SMC4-208ENST00000467468 NAA40Q86UY6 237 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 COMMD7Q86VX2 200 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 TMEM161BQ8NDZ6 487 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 GPR32P1Q8NGA4 272 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 OR1P1Q8NH06 330 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 OR2V1Q8NHB1 315 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 MED18Q9BUE0 208 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 MED28Q9H204 178 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 HES4Q9HCC6 221 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 TAS2R1Q9NYW7 299 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 SLC23A2Q9UGH3 650 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 C3orf18Q9UK00 162 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 DKKL1Q9UK85 242 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 ZNF443Q9Y2A4 671 aaPredicted RBP2.27□□□□□ -2.05
SMC4-208ENST00000467468 OR51B4Q9Y5P0 310 aa2.27□□□□□ -2.05
SMC4-208ENST00000467468 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.26□□□□□ -2.05
SMC4-208ENST00000467468 TRAV8-1A0A0A6YYK1 113 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 C5orf49A4QMS7 147 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 LECT2O14960 151 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 DEDDO75618 318 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 STK16O75716 305 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 MYL12AP19105 171 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 CRABP2P29373 138 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 CDKN2CP42773 168 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 CEBPGP53567 150 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 FOXA1P55317 472 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 SNAP25P60880 206 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 HERVK_113P63121 156 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 CTAG1AP78358 180 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 SLC35A2P78381 396 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 FADDQ13158 208 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 IL15RAQ13261 267 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 DHRS2Q13268 280 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 APOFQ13790 326 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 OR8G1Q15617 311 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 N4BP2L1Q5TBK1 243 aaPredicted RBP2.26□□□□□ -2.05
SMC4-208ENST00000467468 ATP5L2Q7Z4Y8 100 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 LRP11Q86VZ4 500 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 HS3ST5Q8IZT8 346 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 ZNF721Q8TF20 911 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 EEF1AKMT1Q8WVE0 214 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 ITFG2Q969R8 447 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 OPTNQ96CV9 577 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 OTUB2Q96DC9 234 aa2.26□□□□□ -2.05
SMC4-208ENST00000467468 WASHC3Q9Y3C0 194 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms