RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 LYG1Q8N1E2 194 aa15.46■□□□□ 0.07
SNAPC3-205ENST00000467062 TMEM256Q8N2U0 113 aa15.46■□□□□ 0.07
SNAPC3-205ENST00000467062 KCNE4Q8WWG9 221 aa15.46■□□□□ 0.07
SNAPC3-205ENST00000467062 BTF3L4Q96K17 158 aa15.46■□□□□ 0.07
SNAPC3-205ENST00000467062 PROB1E7EW31 1015 aa15.45■□□□□ 0.06
SNAPC3-205ENST00000467062 SPRY1O43609 319 aaPredicted RBP15.45■□□□□ 0.06
SNAPC3-205ENST00000467062 TOMM40O96008 361 aa15.45■□□□□ 0.06
SNAPC3-205ENST00000467062 CCL1P22362 96 aa15.45■□□□□ 0.06
SNAPC3-205ENST00000467062 TPPP2P59282 170 aa15.45■□□□□ 0.06
SNAPC3-205ENST00000467062 Q0VFX4 171 aa15.45■□□□□ 0.06
SNAPC3-205ENST00000467062 MMDQ15546 238 aa15.45■□□□□ 0.06
SNAPC3-205ENST00000467062 CLEC12BQ2HXU8 276 aa15.45■□□□□ 0.06
SNAPC3-205ENST00000467062 NXT1Q9UKK6 140 aaKnown RBP15.45■□□□□ 0.06
SNAPC3-205ENST00000467062 B4GALT1P15291 398 aa15.45■□□□□ 0.06
SNAPC3-205ENST00000467062 LCN2P80188 198 aa15.45■□□□□ 0.06
SNAPC3-205ENST00000467062 PDCD1Q15116 288 aa15.45■□□□□ 0.06
SNAPC3-205ENST00000467062 C20orf196Q8IYI0 205 aa15.45■□□□□ 0.06
SNAPC3-205ENST00000467062 CMTM2Q8TAZ6 248 aa15.45■□□□□ 0.06
SNAPC3-205ENST00000467062 GLRX2Q9NS18 164 aa15.45■□□□□ 0.06
SNAPC3-205ENST00000467062 LOC102725191A0A1B0GVB3 256 aa15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 FOXI3A8MTJ6 420 aaPredicted RBP15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 NTN3O00634 580 aaPredicted RBP15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 SYNGR4O95473 234 aa15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 RPL23P62829 140 aaKnown RBP15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 EXT1Q16394 746 aa15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 PRSS8Q16651 343 aa15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 STPG4Q8N801 248 aa15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 OR2V1Q8NHB1 315 aa15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 SSC4DQ8WTU2 575 aa15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 MBD3L1Q8WWY6 194 aa15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 TMEM54Q969K7 222 aa15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 ATP5SQ99766 215 aa15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 ZNF552Q9H707 407 aaPredicted RBP15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 ANXA10Q9UJ72 324 aa15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 CLEC18AA5D8T8 446 aa15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 MSTNO14793 375 aa15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 DHRS3O75911 302 aa15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 KBTBD11O94819 623 aa15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 TMEM41BQ5BJD5 291 aa15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 WIPI1Q5MNZ9 446 aaPredicted RBP15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 CLEC18CQ8NCF0 446 aa15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 ABHD14BQ96IU4 210 aa15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 VPS25Q9BRG1 176 aa15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 TRAPPC1Q9Y5R8 145 aa15.44■□□□□ 0.06
SNAPC3-205ENST00000467062 CXCL13O43927 109 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 LILRA1O75019 489 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 CST7O76096 145 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 FOLR3P41439 243 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 RRADP55042 308 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 MLF1P58340 268 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 TSPO2Q5TGU0 170 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 LINC01551Q86U37 167 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 TMEM105Q8N8V8 129 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 ZNF738Q8NE65 137 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 OR5L1Q8NGL2 311 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 SPIN2AQ99865 258 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 SPIN2BQ9BPZ2 258 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 NECAP2Q9NVZ3 263 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 MCTS1Q9ULC4 181 aaKnown RBP15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 SSSCA1O60232 199 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 PHLDA2Q53GA4 152 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 LCN15Q6UWW0 184 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 TMEM217Q8N7C4 229 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 OR4B1Q8NGF8 309 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 FGFBP3Q8TAT2 258 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 DYRK2Q92630 601 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 PARD6GQ9BYG4 376 aaPredicted RBP15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 SEPSECSQ9HD40 501 aaKnown RBP15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 SLC2A9Q9NRM0 540 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 WIPI2Q9Y4P8 454 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 ZFHX4Q86UP3 3567 aa15.43■□□□□ 0.06
SNAPC3-205ENST00000467062 PHF1O43189 567 aaPredicted RBP15.42■□□□□ 0.06
SNAPC3-205ENST00000467062 LAMTOR5O43504 91 aa15.42■□□□□ 0.06
SNAPC3-205ENST00000467062 IFNA5P01569 189 aa15.42■□□□□ 0.06
SNAPC3-205ENST00000467062 UBE2G2P60604 165 aa15.42■□□□□ 0.06
SNAPC3-205ENST00000467062 C10orf128Q5T292 105 aa15.42■□□□□ 0.06
SNAPC3-205ENST00000467062 SLC25A24Q6NUK1 477 aa15.42■□□□□ 0.06
SNAPC3-205ENST00000467062 Q6ZWC4 215 aa15.42■□□□□ 0.06
SNAPC3-205ENST00000467062 SH2D2AQ9NP31 389 aa15.42■□□□□ 0.06
SNAPC3-205ENST00000467062 SLC45A2Q9UMX9 530 aa15.42■□□□□ 0.06
SNAPC3-205ENST00000467062 LOC105371242A0A075B767 164 aa15.42■□□□□ 0.06
SNAPC3-205ENST00000467062 NUPR1O60356 82 aa15.42■□□□□ 0.06
SNAPC3-205ENST00000467062 GLI4P10075 376 aa15.42■□□□□ 0.06
SNAPC3-205ENST00000467062 CCDC71LQ8N9Z2 235 aa15.42■□□□□ 0.06
SNAPC3-205ENST00000467062 DEPPQ9NTK1 212 aa15.42■□□□□ 0.06
SNAPC3-205ENST00000467062 ZNF850A8MQ14 1090 aa15.41■□□□□ 0.06
SNAPC3-205ENST00000467062 IGHEP01854 428 aa15.41■□□□□ 0.06
SNAPC3-205ENST00000467062 OPRM1P35372 400 aa15.41■□□□□ 0.06
SNAPC3-205ENST00000467062 SRPXP78539 464 aa15.41■□□□□ 0.06
SNAPC3-205ENST00000467062 MRPS34P82930 218 aaKnown RBP15.41■□□□□ 0.06
SNAPC3-205ENST00000467062 C9orf135Q5VTT2 229 aa15.41■□□□□ 0.06
SNAPC3-205ENST00000467062 OR4C5Q8NGB2 326 aa15.41■□□□□ 0.06
SNAPC3-205ENST00000467062 VN1R17PQ8TDU5 208 aa15.41■□□□□ 0.06
SNAPC3-205ENST00000467062 MANBALQ9NQG1 85 aa15.41■□□□□ 0.06
SNAPC3-205ENST00000467062 LAMA5O15230 3695 aa15.41■□□□□ 0.06
SNAPC3-205ENST00000467062 TMEM238LA0A1B0GVL6 79 aa15.41■□□□□ 0.06
SNAPC3-205ENST00000467062 PINLYPA6NC86 204 aa15.41■□□□□ 0.06
SNAPC3-205ENST00000467062 NKX2-6A6NCS4 301 aa15.41■□□□□ 0.06
SNAPC3-205ENST00000467062 LRRC3CA6NJW4 275 aa15.41■□□□□ 0.06
SNAPC3-205ENST00000467062 CNOT4O95628 575 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms