RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 C15orf65H3BRN8 121 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 SULT2B1O00204 365 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 LATO43561 262 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 TPST2O60704 377 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 FOXH1O75593 365 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 TNFSF13O75888 250 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 FARS2O95363 451 aaKnown RBP2.6□□□□□ -1.99
VPS13D-203ENST00000466732 SYNGR4O95473 234 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 AIFM1O95831 613 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 HSPB1P04792 205 aaKnown RBP2.6□□□□□ -1.99
VPS13D-203ENST00000466732 TYMSP04818 313 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 CA3P07451 260 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 SOD3P08294 240 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 HOXB7P09629 217 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 GIPP09681 153 aaPredicted RBP2.6□□□□□ -1.99
VPS13D-203ENST00000466732 H2AFZP0C0S5 128 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 HIST1H1EP10412 219 aaKnown RBP2.6□□□□□ -1.99
VPS13D-203ENST00000466732 CXCL2P19875 107 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 PMCHP20382 165 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 MIPP30301 263 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 HTR1FP30939 366 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 OR10J1P30954 320 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 GPR6P46095 362 aaPredicted RBP2.6□□□□□ -1.99
VPS13D-203ENST00000466732 TFPI2P48307 235 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 DNASE1L1P49184 302 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 NUMBP49757 651 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 NUDT2P50583 147 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 CTBP2P56545 445 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 RAB38P57729 211 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 TCTAP57738 103 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 TAS2R30P59541 319 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 PAFAH1B2P68402 229 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 PLCXD2Q0VAA5 305 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 ST3GAL3Q11203 375 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 FZD2Q14332 565 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 OR1Q1Q15612 314 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 TTLL9Q3SXZ7 439 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 SPIN4Q56A73 249 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 TMEM255AQ5JRV8 349 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 CPTPQ5TA50 214 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 ZNF660Q6AZW8 331 aaPredicted RBP2.6□□□□□ -1.99
VPS13D-203ENST00000466732 OR10K2Q6IF99 312 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 CBLN3Q6UW01 205 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 HEPN1Q6WQI6 88 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 ZNF621Q6ZSS3 439 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 COX15Q7KZN9 410 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 FA2HQ7L5A8 372 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 ZNF683Q8IZ20 524 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 OR8I2Q8N0Y5 310 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 TCTEX1D1Q8N7M0 179 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 ACOT4Q8N9L9 421 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 FER1L6-AS1Q8NA97 138 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 CHST4Q8NCG5 386 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 SDR9C7Q8NEX9 313 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 OR1L4Q8NGR5 311 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 OR2A12Q8NGT7 310 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 OR2T35Q8NGX2 323 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 OR13G1Q8NGZ3 307 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 OR8D1Q8WZ84 308 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 LYSMD1Q96S90 227 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 P2RX4Q99571 388 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 MGLLQ99685 303 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 HIST1H2BLQ99880 126 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 MICU1Q9BPX6 476 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 HCAR1Q9BXC0 346 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 CDCA4Q9BXL8 241 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 RSPO3Q9BXY4 272 aaPredicted RBP2.6□□□□□ -1.99
VPS13D-203ENST00000466732 NXF5Q9H1B4 397 aaKnown RBP2.6□□□□□ -1.99
VPS13D-203ENST00000466732 DUSP21Q9H596 190 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 ISG20L2Q9H9L3 353 aaKnown RBP2.6□□□□□ -1.99
VPS13D-203ENST00000466732 TAF9BQ9HBM6 251 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 PRSS16Q9NQE7 514 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 EXOSC3Q9NQT5 275 aaKnown RBP2.6□□□□□ -1.99
VPS13D-203ENST00000466732 UQCC1Q9NVA1 299 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 MRPL16Q9NX20 251 aaKnown RBP2.6□□□□□ -1.99
VPS13D-203ENST00000466732 RPS6KB2Q9UBS0 482 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 CLN8Q9UBY8 286 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 ERG28Q9UKR5 140 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 TBX21Q9UL17 535 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 TRAPPC2LQ9UL33 140 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 FOXJ3Q9UPW0 622 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 KLHDC2Q9Y2U9 406 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 PPIAL4AQ9Y536 164 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 SNX10Q9Y5X0 201 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 UBIAD1Q9Y5Z9 338 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 MYO10Q9HD67 2058 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 PTPRJQ12913 1337 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 C3P01024 1663 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 TOPAZ1Q8N9V7 1692 aa2.6□□□□□ -1.99
VPS13D-203ENST00000466732 TIAM2Q8IVF5 1701 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 ARAP2Q8WZ64 1704 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 TOGARAM1Q9Y4F4 1720 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 TRPM7Q96QT4 1865 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 TRAV19A0A0A6YYK7 116 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 A0A0D9SG52 128 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 A0A0J9YY10 115 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 A0A1B0GX78 115 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 SLC22A20A6NK97 555 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 MFNGO00587 321 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 SLC31A1O15431 190 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms