RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 HERPUD1Q15011 391 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 AANATQ16613 207 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 LRRC75BQ2VPJ9 315 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 PLA1AQ53H76 456 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 IGSF11Q5DX21 431 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 LAX1Q8IWV1 398 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 MCFD2Q8NI22 146 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 RPEQ96AT9 228 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 CABLES2Q9BTV7 478 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 C6orf62Q9GZU0 229 aaPredicted RBP11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 OR1A1Q9P1Q5 309 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 EXTL2Q9UBQ6 330 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 ADAM30Q9UKF2 790 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 POMT1Q9Y6A1 747 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 NF1P21359 2839 aa11.67□□□□□ -0.54
DNMT3A-208ENST00000466601 BTBD17A6NE02 478 aa11.67□□□□□ -0.54
DNMT3A-208ENST00000466601 VGLL3A8MV65 326 aa11.67□□□□□ -0.54
DNMT3A-208ENST00000466601 OOSP1A8MZH6 123 aa11.67□□□□□ -0.54
DNMT3A-208ENST00000466601 H3BUX3 64 aa11.67□□□□□ -0.54
DNMT3A-208ENST00000466601 CLDN34H7C241 214 aa11.67□□□□□ -0.54
DNMT3A-208ENST00000466601 BET1O15155 118 aa11.67□□□□□ -0.54
DNMT3A-208ENST00000466601 IL3RAP26951 378 aa11.67□□□□□ -0.54
DNMT3A-208ENST00000466601 PRSS3P35030 304 aa11.67□□□□□ -0.54
DNMT3A-208ENST00000466601 HOGA1Q86XE5 327 aa11.67□□□□□ -0.54
DNMT3A-208ENST00000466601 SNX29P2Q8IUI4 249 aa11.67□□□□□ -0.54
DNMT3A-208ENST00000466601 GVQW1Q8N7I0 195 aa11.67□□□□□ -0.54
DNMT3A-208ENST00000466601 GCDHQ92947 438 aaPredicted RBP11.67□□□□□ -0.54
DNMT3A-208ENST00000466601 TOMM40LQ969M1 308 aa11.67□□□□□ -0.54
DNMT3A-208ENST00000466601 ABHD14AQ9BUJ0 271 aa11.67□□□□□ -0.54
DNMT3A-208ENST00000466601 NXF2Q9GZY0 626 aaKnown RBP11.67□□□□□ -0.54
DNMT3A-208ENST00000466601 ABCB10Q9NRK6 738 aa11.67□□□□□ -0.54
DNMT3A-208ENST00000466601 TRBV6-7A0A0A0MS04 114 aa11.66□□□□□ -0.54
DNMT3A-208ENST00000466601 MEIS3P1A6NDR6 274 aa11.66□□□□□ -0.54
DNMT3A-208ENST00000466601 DIRAS3O95661 229 aa11.66□□□□□ -0.54
DNMT3A-208ENST00000466601 RNASE1P07998 156 aaKnown RBP11.66□□□□□ -0.54
DNMT3A-208ENST00000466601 RAB13P51153 203 aa11.66□□□□□ -0.54
DNMT3A-208ENST00000466601 DIAPH2-AS1Q14236 149 aa11.66□□□□□ -0.54
DNMT3A-208ENST00000466601 FOXB2Q5VYV0 432 aa11.66□□□□□ -0.54
DNMT3A-208ENST00000466601 CCDC144NLQ6NUI1 221 aa11.66□□□□□ -0.54
DNMT3A-208ENST00000466601 CNIH2Q6PI25 160 aa11.66□□□□□ -0.54
DNMT3A-208ENST00000466601 LYG1Q8N1E2 194 aa11.66□□□□□ -0.54
DNMT3A-208ENST00000466601 BEST4Q8NFU0 473 aa11.66□□□□□ -0.54
DNMT3A-208ENST00000466601 OR2AK2Q8NG84 335 aa11.66□□□□□ -0.54
DNMT3A-208ENST00000466601 OR5R1Q8NH85 324 aa11.66□□□□□ -0.54
DNMT3A-208ENST00000466601 OR10J5Q8NHC4 309 aa11.66□□□□□ -0.54
DNMT3A-208ENST00000466601 TOLLIPQ9H0E2 274 aa11.66□□□□□ -0.54
DNMT3A-208ENST00000466601 PARP12Q9H0J9 701 aaKnown RBP11.66□□□□□ -0.54
DNMT3A-208ENST00000466601 ANXA10Q9UJ72 324 aa11.66□□□□□ -0.54
DNMT3A-208ENST00000466601 JMJD1CQ15652 2540 aa11.66□□□□□ -0.54
DNMT3A-208ENST00000466601 ITGB1BP1O14713 200 aa11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 HSD17B6O14756 317 aa11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 TPPPO94811 219 aa11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 GAPDHP04406 335 aaKnown RBP11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 FCER2P06734 321 aa11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 CTXN2P0C2S0 81 aa11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 RAB7AP51149 207 aa11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 DYNLT3P51808 116 aa11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 ARHGDIBP52566 201 aa11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 ZNF137PP52743 207 aa11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 C16orf87Q6PH81 154 aa11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 PIFOQ8TCI5 191 aa11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 ZFAND2BQ8WV99 257 aa11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 EDARADDQ8WWZ3 215 aa11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 ST6GALNAC6Q969X2 333 aa11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 DIRAS2Q96HU8 199 aa11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 GINS4Q9BRT9 223 aa11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 CHIAQ9BZP6 476 aa11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 C11orf54Q9H0W9 315 aaPredicted RBP11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 MMP27Q9H306 513 aa11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 IFT46Q9NQC8 304 aa11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 RDH8Q9NYR8 311 aa11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 A3GALT2U3KPV4 340 aa11.65□□□□□ -0.54
DNMT3A-208ENST00000466601 SULT1C2O00338 296 aa11.64□□□□□ -0.55
DNMT3A-208ENST00000466601 ST8SIA5O15466 376 aa11.64□□□□□ -0.55
DNMT3A-208ENST00000466601 LPLP06858 475 aa11.64□□□□□ -0.55
DNMT3A-208ENST00000466601 BRS3P32247 399 aa11.64□□□□□ -0.55
DNMT3A-208ENST00000466601 REG1BP48304 166 aa11.64□□□□□ -0.55
DNMT3A-208ENST00000466601 ZNF816Q0VGE8 651 aaPredicted RBP11.64□□□□□ -0.55
DNMT3A-208ENST00000466601 LY6EQ16553 131 aa11.64□□□□□ -0.55
DNMT3A-208ENST00000466601 ODF3L1Q8IXM7 274 aa11.64□□□□□ -0.55
DNMT3A-208ENST00000466601 OR8H3Q8N146 312 aa11.64□□□□□ -0.55
DNMT3A-208ENST00000466601 GPX8Q8TED1 209 aa11.64□□□□□ -0.55
DNMT3A-208ENST00000466601 FAM216AQ8WUB2 273 aa11.64□□□□□ -0.55
DNMT3A-208ENST00000466601 C15orf40Q8WUR7 153 aa11.64□□□□□ -0.55
DNMT3A-208ENST00000466601 IFI27L2Q9H2X8 130 aa11.64□□□□□ -0.55
DNMT3A-208ENST00000466601 SCPEP1Q9HB40 452 aa11.64□□□□□ -0.55
DNMT3A-208ENST00000466601 VPREB3Q9UKI3 123 aa11.64□□□□□ -0.55
DNMT3A-208ENST00000466601 ANAPC10Q9UM13 185 aa11.64□□□□□ -0.55
DNMT3A-208ENST00000466601 A0A1W2PPI3 338 aa11.63□□□□□ -0.55
DNMT3A-208ENST00000466601 LANCL1O43813 399 aa11.63□□□□□ -0.55
DNMT3A-208ENST00000466601 TNFSF8P32971 234 aa11.63□□□□□ -0.55
DNMT3A-208ENST00000466601 ARPC4P59998 168 aa11.63□□□□□ -0.55
DNMT3A-208ENST00000466601 KRTAP24-1Q3LI83 254 aa11.63□□□□□ -0.55
DNMT3A-208ENST00000466601 H1FOOQ8IZA3 346 aaPredicted RBP11.63□□□□□ -0.55
DNMT3A-208ENST00000466601 RTN4IP1Q8WWV3 396 aaPredicted RBP11.63□□□□□ -0.55
DNMT3A-208ENST00000466601 SNAPC3Q92966 411 aa11.63□□□□□ -0.55
DNMT3A-208ENST00000466601 ABHD1Q96SE0 405 aa11.63□□□□□ -0.55
DNMT3A-208ENST00000466601 AGMATQ9BSE5 352 aa11.63□□□□□ -0.55
DNMT3A-208ENST00000466601 GHITMQ9H3K2 345 aa11.63□□□□□ -0.55
DNMT3A-208ENST00000466601 PIPOXQ9P0Z9 390 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms