RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 A0A075B6Q4 140 aa20.69■□□□□ 0.9
SMC4-206ENST00000465903 OR2F2O95006 317 aa20.69■□□□□ 0.9
SMC4-206ENST00000465903 CD3GP09693 182 aa20.69■□□□□ 0.9
SMC4-206ENST00000465903 IL3RAP26951 378 aa20.69■□□□□ 0.9
SMC4-206ENST00000465903 RPS19P39019 145 aaKnown RBP20.69■□□□□ 0.9
SMC4-206ENST00000465903 ABHD14AQ9BUJ0 271 aa20.69■□□□□ 0.9
SMC4-206ENST00000465903 PRSS22Q9GZN4 317 aa20.69■□□□□ 0.9
SMC4-206ENST00000465903 SERTAD4Q9NUC0 356 aa20.69■□□□□ 0.9
SMC4-206ENST00000465903 ELF5Q9UKW6 265 aaPredicted RBP20.69■□□□□ 0.9
SMC4-206ENST00000465903 MGAT4AQ9UM21 535 aa20.69■□□□□ 0.9
SMC4-206ENST00000465903 RGS11O94810 467 aa20.68■□□□□ 0.9
SMC4-206ENST00000465903 AMY1AP04745 511 aa20.68■□□□□ 0.9
SMC4-206ENST00000465903 AMY2AP04746 511 aa20.68■□□□□ 0.9
SMC4-206ENST00000465903 FAM106CPP0CH98 169 aa20.68■□□□□ 0.9
SMC4-206ENST00000465903 SCAND1P57086 179 aa20.68■□□□□ 0.9
SMC4-206ENST00000465903 MOB3BQ86TA1 216 aa20.68■□□□□ 0.9
SMC4-206ENST00000465903 LYG1Q8N1E2 194 aa20.68■□□□□ 0.9
SMC4-206ENST00000465903 OR2T6Q8NHC8 308 aa20.68■□□□□ 0.9
SMC4-206ENST00000465903 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.68■□□□□ 0.9
SMC4-206ENST00000465903 IGHV3-72A0A0B4J1Y9 119 aa20.67■□□□□ 0.9
SMC4-206ENST00000465903 IGKV1-6A0A0C4DH72 117 aa20.67■□□□□ 0.9
SMC4-206ENST00000465903 FCGR3AP08637 254 aa20.67■□□□□ 0.9
SMC4-206ENST00000465903 EBI3Q14213 229 aa20.67■□□□□ 0.9
SMC4-206ENST00000465903 DTX3Q8N9I9 347 aa20.67■□□□□ 0.9
SMC4-206ENST00000465903 SLC25A38Q96DW6 304 aa20.67■□□□□ 0.9
SMC4-206ENST00000465903 PARP12Q9H0J9 701 aaKnown RBP20.67■□□□□ 0.9
SMC4-206ENST00000465903 SERPINE3A8MV23 424 aa20.66■□□□□ 0.9
SMC4-206ENST00000465903 TRDCB7Z8K6 153 aa20.66■□□□□ 0.9
SMC4-206ENST00000465903 IGKV1D-33P01593 117 aa20.66■□□□□ 0.9
SMC4-206ENST00000465903 IGKV1-33P01594 117 aa20.66■□□□□ 0.9
SMC4-206ENST00000465903 CDNFQ49AH0 187 aa20.66■□□□□ 0.9
SMC4-206ENST00000465903 TGIF2LXQ8IUE1 241 aa20.66■□□□□ 0.9
SMC4-206ENST00000465903 RHBDL2Q9NX52 303 aa20.66■□□□□ 0.9
SMC4-206ENST00000465903 OR1A1Q9P1Q5 309 aa20.66■□□□□ 0.9
SMC4-206ENST00000465903 ETV7Q9Y603 341 aa20.66■□□□□ 0.9
SMC4-206ENST00000465903 ZNF736B4DX44 427 aaPredicted RBP20.65■□□□□ 0.9
SMC4-206ENST00000465903 LANCL1O43813 399 aa20.65■□□□□ 0.9
SMC4-206ENST00000465903 HNF4GQ14541 408 aa20.65■□□□□ 0.9
SMC4-206ENST00000465903 HERPUD1Q15011 391 aa20.65■□□□□ 0.9
SMC4-206ENST00000465903 RBMXL1Q96E39 390 aaKnown RBP20.65■□□□□ 0.9
SMC4-206ENST00000465903 AKR1E2Q96JD6 320 aa20.65■□□□□ 0.9
SMC4-206ENST00000465903 SLC23A1Q9UHI7 598 aa20.65■□□□□ 0.9
SMC4-206ENST00000465903 ZNF230Q9UIE0 474 aaPredicted RBP20.65■□□□□ 0.9
SMC4-206ENST00000465903 TMEM127O75204 238 aa20.64■□□□□ 0.89
SMC4-206ENST00000465903 TMEM11P17152 192 aa20.64■□□□□ 0.89
SMC4-206ENST00000465903 CEACAM6P40199 344 aa20.64■□□□□ 0.89
SMC4-206ENST00000465903 NCS1P62166 190 aa20.64■□□□□ 0.89
SMC4-206ENST00000465903 MRPS15P82914 257 aaKnown RBP20.64■□□□□ 0.89
SMC4-206ENST00000465903 ARFRP1Q13795 201 aa20.64■□□□□ 0.89
SMC4-206ENST00000465903 HES1Q14469 280 aa20.64■□□□□ 0.89
SMC4-206ENST00000465903 ARL6IP1Q15041 203 aa20.64■□□□□ 0.89
SMC4-206ENST00000465903 ZNF260Q3ZCT1 412 aa20.64■□□□□ 0.89
SMC4-206ENST00000465903 C11orf88Q6PI97 169 aa20.64■□□□□ 0.89
SMC4-206ENST00000465903 IZUMO1Q8IYV9 350 aa20.64■□□□□ 0.89
SMC4-206ENST00000465903 OR2AK2Q8NG84 335 aa20.64■□□□□ 0.89
SMC4-206ENST00000465903 SGMS2Q8NHU3 365 aa20.64■□□□□ 0.89
SMC4-206ENST00000465903 MAFIPQ8WZ33 124 aa20.64■□□□□ 0.89
SMC4-206ENST00000465903 EAF1Q96JC9 268 aaPredicted RBP20.64■□□□□ 0.89
SMC4-206ENST00000465903 IFI27L2Q9H2X8 130 aa20.64■□□□□ 0.89
SMC4-206ENST00000465903 SPATA2Q9UM82 520 aa20.64■□□□□ 0.89
SMC4-206ENST00000465903 SH2D7A6NKC9 451 aaPredicted RBP20.63■□□□□ 0.89
SMC4-206ENST00000465903 ITGB1BP1O14713 200 aa20.63■□□□□ 0.89
SMC4-206ENST00000465903 ST8SIA5O15466 376 aa20.63■□□□□ 0.89
SMC4-206ENST00000465903 TXNL1O43396 289 aa20.63■□□□□ 0.89
SMC4-206ENST00000465903 GSTT2P0CG29 244 aa20.63■□□□□ 0.89
SMC4-206ENST00000465903 GSTT2BP0CG30 244 aa20.63■□□□□ 0.89
SMC4-206ENST00000465903 CD1BP29016 333 aa20.63■□□□□ 0.89
SMC4-206ENST00000465903 OR3A3P47888 321 aa20.63■□□□□ 0.89
SMC4-206ENST00000465903 ABCA11PQ4W5N1 156 aa20.63■□□□□ 0.89
SMC4-206ENST00000465903 ZNF833PQ6ZTB9 187 aa20.63■□□□□ 0.89
SMC4-206ENST00000465903 ZNF251Q9BRH9 671 aa20.63■□□□□ 0.89
SMC4-206ENST00000465903 MRPS26Q9BYN8 205 aaKnown RBP20.63■□□□□ 0.89
SMC4-206ENST00000465903 NAA50Q9GZZ1 169 aaKnown RBP20.63■□□□□ 0.89
SMC4-206ENST00000465903 FABP7O15540 132 aa20.62■□□□□ 0.89
SMC4-206ENST00000465903 SCGNO76038 276 aa20.62■□□□□ 0.89
SMC4-206ENST00000465903 LPLP06858 475 aa20.62■□□□□ 0.89
SMC4-206ENST00000465903 ZBTB25P24278 435 aa20.62■□□□□ 0.89
SMC4-206ENST00000465903 ALDH3B2P48448 385 aa20.62■□□□□ 0.89
SMC4-206ENST00000465903 VBP1P61758 197 aa20.62■□□□□ 0.89
SMC4-206ENST00000465903 TMEM95Q3KNT9 176 aa20.62■□□□□ 0.89
SMC4-206ENST00000465903 HACD4Q5VWC8 232 aa20.62■□□□□ 0.89
SMC4-206ENST00000465903 CROCCP3Q8IVE0 287 aa20.62■□□□□ 0.89
SMC4-206ENST00000465903 Q8N6K4 173 aa20.62■□□□□ 0.89
SMC4-206ENST00000465903 KLHDC1Q8N7A1 406 aa20.62■□□□□ 0.89
SMC4-206ENST00000465903 OR4A4PQ8NGN8 299 aa20.62■□□□□ 0.89
SMC4-206ENST00000465903 WIPF2Q8TF74 440 aaPredicted RBP20.62■□□□□ 0.89
SMC4-206ENST00000465903 AGMATQ9BSE5 352 aa20.62■□□□□ 0.89
SMC4-206ENST00000465903 TOLLIPQ9H0E2 274 aa20.62■□□□□ 0.89
SMC4-206ENST00000465903 C11orf54Q9H0W9 315 aaPredicted RBP20.62■□□□□ 0.89
SMC4-206ENST00000465903 MOB4Q9Y3A3 225 aa20.62■□□□□ 0.89
SMC4-206ENST00000465903 WNK1Q9H4A3 2382 aa20.61■□□□□ 0.89
SMC4-206ENST00000465903 TET2Q6N021 2002 aaPredicted RBP20.61■□□□□ 0.89
SMC4-206ENST00000465903 TRRAPQ9Y4A5 3859 aa20.61■□□□□ 0.89
SMC4-206ENST00000465903 IGKV1D-8A0A087WSZ0 117 aa20.61■□□□□ 0.89
SMC4-206ENST00000465903 SAA2-SAA4A0A096LPE2 208 aa20.61■□□□□ 0.89
SMC4-206ENST00000465903 TFAP2AP05549 437 aa20.61■□□□□ 0.89
SMC4-206ENST00000465903 GSTP1P09211 210 aaKnown RBP20.61■□□□□ 0.89
SMC4-206ENST00000465903 SAA2P0DJI9 122 aaPredicted RBP20.61■□□□□ 0.89
SMC4-206ENST00000465903 SERPINB10P48595 397 aa20.61■□□□□ 0.89
SMC4-206ENST00000465903 SRSF7Q16629 238 aaKnown RBP eCLIP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms