RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 SIRPDQ9H106 197 aa10.96□□□□□ -0.65
ATF3-208ENST00000465155 TMEM133Q9H2Q1 129 aa10.96□□□□□ -0.65
ATF3-208ENST00000465155 DPAGT1Q9H3H5 408 aa10.96□□□□□ -0.65
ATF3-208ENST00000465155 HIF1ANQ9NWT6 349 aa10.96□□□□□ -0.65
ATF3-208ENST00000465155 RBM7Q9Y580 266 aaKnown RBP10.96□□□□□ -0.65
ATF3-208ENST00000465155 CCDC168Q8NDH2 2452 aa10.96□□□□□ -0.66
ATF3-208ENST00000465155 TRAV20A0A0B4J274 112 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 IGKV1D-13A0A0B4J2D9 117 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 A0A1W2PPE3 182 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 TOX4O94842 621 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 TGFAP01135 160 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 IGKV1-13P0DP09 117 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 PRTN3P24158 256 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 GZMKP49863 264 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 ZNF134P52741 427 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 BAMBIQ13145 260 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 RBMS2Q15434 407 aaKnown RBP10.95□□□□□ -0.66
ATF3-208ENST00000465155 PLA1AQ53H76 456 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 OR2AK2Q8NG84 335 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 MARCH1Q8TCQ1 289 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 EDARADDQ8WWZ3 215 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 FXYD6Q9H0Q3 95 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 PSG11Q9UQ72 335 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 A0A087X0M5 115 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 A0A1B0GX30 115 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 SLC31A2O15432 143 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 ST8SIA5O15466 376 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 NDUFB6O95139 128 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 TCRBP04435 133 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 OR8U9P0C7N5 309 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 MMP9P14780 707 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 SPNP16150 400 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 LUMP51884 338 aaPredicted RBP10.95□□□□□ -0.66
ATF3-208ENST00000465155 PAX8Q06710 450 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 LDLRAD3Q86YD5 345 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 ABHD12Q8N2K0 398 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 ZNF439Q8NDP4 499 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 OR8U1Q8NH10 309 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 SECTM1Q8WVN6 248 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 SLC25A21Q9BQT8 299 aaPredicted RBP10.95□□□□□ -0.66
ATF3-208ENST00000465155 COPZ2Q9P299 210 aa10.95□□□□□ -0.66
ATF3-208ENST00000465155 WNK2Q9Y3S1 2297 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 AKAP9Q99996 3911 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 ITPR3Q14573 2671 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 IGHV2-26A0A0B4J1V2 119 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 PGAM2P15259 253 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 GATA3P23771 443 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 COX7A1P24310 79 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 ECI1P42126 302 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 KLRD1Q13241 179 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 CT45A1Q5HYN5 189 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 LY6G6FQ5SQ64 297 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 CYB5R2Q6BCY4 276 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 PNKDQ8N490 385 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 DUSP18Q8NEJ0 188 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 OR13D1Q8NGV5 346 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 CT45A3Q8NHU0 189 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 ABHD14AQ9BUJ0 271 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 CLEC7AQ9BXN2 247 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 SLC5A7Q9GZV3 580 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 OR2D2Q9H210 308 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 HEXA-AS1Q9H8Q6 139 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 UNKLQ9H9P5 680 aaKnown RBP10.94□□□□□ -0.66
ATF3-208ENST00000465155 ZNRD1Q9P1U0 126 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 RNF150Q9ULK6 438 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 KCNS2Q9ULS6 477 aa10.94□□□□□ -0.66
ATF3-208ENST00000465155 J3QR06 171 aa10.93□□□□□ -0.66
ATF3-208ENST00000465155 ZNF16P17020 682 aaPredicted RBP10.93□□□□□ -0.66
ATF3-208ENST00000465155 CD34P28906 385 aa10.93□□□□□ -0.66
ATF3-208ENST00000465155 TRIM16LQ309B1 348 aa10.93□□□□□ -0.66
ATF3-208ENST00000465155 Q3ZCU0 254 aa10.93□□□□□ -0.66
ATF3-208ENST00000465155 FAHD2BQ6P2I3 314 aaPredicted RBP10.93□□□□□ -0.66
ATF3-208ENST00000465155 SLC25A48Q6ZT89 311 aaKnown RBP10.93□□□□□ -0.66
ATF3-208ENST00000465155 PDZD9Q8IXQ8 264 aa10.93□□□□□ -0.66
ATF3-208ENST00000465155 OR9G1Q8NH87 305 aa10.93□□□□□ -0.66
ATF3-208ENST00000465155 TNFRSF14Q92956 283 aa10.93□□□□□ -0.66
ATF3-208ENST00000465155 FAHD2AQ96GK7 314 aa10.93□□□□□ -0.66
ATF3-208ENST00000465155 ABHD14BQ96IU4 210 aa10.93□□□□□ -0.66
ATF3-208ENST00000465155 TBX15Q96SF7 602 aa10.93□□□□□ -0.66
ATF3-208ENST00000465155 C20orf85Q9H1P6 137 aa10.93□□□□□ -0.66
ATF3-208ENST00000465155 MMP28Q9H239 520 aa10.93□□□□□ -0.66
ATF3-208ENST00000465155 C7orf69Q9H7B7 122 aa10.93□□□□□ -0.66
ATF3-208ENST00000465155 CCL28Q9NRJ3 127 aa10.93□□□□□ -0.66
ATF3-208ENST00000465155 NUDT15Q9NV35 164 aa10.93□□□□□ -0.66
ATF3-208ENST00000465155 FLVCR2Q9UPI3 526 aa10.93□□□□□ -0.66
ATF3-208ENST00000465155 VSIG4Q9Y279 399 aa10.93□□□□□ -0.66
ATF3-208ENST00000465155 AUP1Q9Y679 476 aa10.93□□□□□ -0.66
ATF3-208ENST00000465155 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.93□□□□□ -0.665e-6■■□□□ 13.4
ATF3-208ENST00000465155 ZNF469Q96JG9 3925 aaPredicted RBP10.93□□□□□ -0.66
ATF3-208ENST00000465155 TRAV6A0A075B6T7 132 aa10.92□□□□□ -0.66
ATF3-208ENST00000465155 TOR1AO14656 332 aa10.92□□□□□ -0.66
ATF3-208ENST00000465155 ITGB1BP1O14713 200 aa10.92□□□□□ -0.66
ATF3-208ENST00000465155 HSD17B6O14756 317 aa10.92□□□□□ -0.66
ATF3-208ENST00000465155 ARPC1BO15143 372 aaKnown RBP10.92□□□□□ -0.66
ATF3-208ENST00000465155 HOXB4P17483 251 aaPredicted RBP10.92□□□□□ -0.66
ATF3-208ENST00000465155 PI3P19957 117 aa10.92□□□□□ -0.66
ATF3-208ENST00000465155 RAB7AP51149 207 aa10.92□□□□□ -0.66
ATF3-208ENST00000465155 UCP3P55916 312 aa10.92□□□□□ -0.66
ATF3-208ENST00000465155 OXA1LQ15070 435 aa10.92□□□□□ -0.66
ATF3-208ENST00000465155 SURF2Q15527 256 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms