RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 OPTCQ9UBM4 332 aa2.95□□□□□ -1.94
PTCD3-205ENST00000464541 ENOPH1Q9UHY7 261 aa2.95□□□□□ -1.94
PTCD3-205ENST00000464541 PRELID3BQ9Y3B1 194 aa2.95□□□□□ -1.94
PTCD3-205ENST00000464541 HIVEP2P31629 2446 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 TRAV8-3A0A0A6YYJ7 113 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 LOC389332A0A1B0GUA5 103 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 PQLC2LA1A4F0 135 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 EVPLLA8MZ36 301 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 ZNF878C9JN71 531 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 PPP5D1E7EU14 171 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 PFDN1O60925 122 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 OR2A4O95047 310 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 DHFRP00374 187 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 OR4Q2P0C623 313 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 OR5G3P0C626 314 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 ZNF688P0C7X2 276 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 SCGB1C2P0DMR2 95 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 GABRA1P14867 456 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 HIST1H1TP22492 207 aaPredicted RBP2.94□□□□□ -1.94
PTCD3-205ENST00000464541 GABRA4P48169 554 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 RPL23P62829 140 aaKnown RBP2.94□□□□□ -1.94
PTCD3-205ENST00000464541 DYNLL1P63167 89 aaKnown RBP2.94□□□□□ -1.94
PTCD3-205ENST00000464541 CRADDP78560 199 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 PNOCQ13519 176 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 ZNF404Q494X3 552 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 TRMT12Q53H54 448 aaKnown RBP2.94□□□□□ -1.94
PTCD3-205ENST00000464541 CENPWQ5EE01 88 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 SMARCD3Q6STE5 483 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 TMEM144Q7Z5S9 345 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 SCGB1C1Q8TD33 95 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 ORAOV1Q8WV07 137 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 TWIST2Q8WVJ9 160 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 CCL17Q92583 94 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 SLC35B4Q969S0 331 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 SLC25A46Q96AG3 418 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 OR2A7Q96R45 310 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 TBL1XR1Q9BZK7 514 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 ULBP3Q9BZM4 244 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 ZSCAN16Q9H4T2 348 aaPredicted RBP2.94□□□□□ -1.94
PTCD3-205ENST00000464541 PARP11Q9NR21 331 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 SPANXA1Q9NS26 97 aa2.94□□□□□ -1.94
PTCD3-205ENST00000464541 COL27A1Q8IZC6 1860 aaPredicted RBP2.94□□□□□ -1.94
PTCD3-205ENST00000464541 DOCK8Q8NF50 2099 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 CAMTA1Q9Y6Y1 1673 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 KIF24Q5T7B8 1368 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 A0A087WUJ7 227 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 IGHV6-1A0A0B4J1U7 121 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 OR6C6A6NF89 314 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 OR11H12B2RN74 326 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 M0R1X1 148 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 DNASE2O00115 360 aaPredicted RBP2.93□□□□□ -1.94
PTCD3-205ENST00000464541 CCDC22O60826 627 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 ATG12O94817 140 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 CYB5R3P00387 301 aaPredicted RBP2.93□□□□□ -1.94
PTCD3-205ENST00000464541 CA2P00918 260 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 CRYBA1P05813 215 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 FAM228BP0C875 321 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 OR13C7P0DN81 318 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 SERPINB1P30740 379 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 CRYBA4P53673 196 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 GFERP55789 205 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 TAS2R41P59536 307 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 GRB2P62993 217 aaKnown RBP2.93□□□□□ -1.94
PTCD3-205ENST00000464541 SNRNP35Q16560 246 aaKnown RBP2.93□□□□□ -1.94
PTCD3-205ENST00000464541 ACOT6Q3I5F7 207 aaPredicted RBP2.93□□□□□ -1.94
PTCD3-205ENST00000464541 FAM78BQ5VT40 261 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 KDM4DQ6B0I6 523 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 ELP2Q6IA86 826 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 SFXN4Q6P4A7 337 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 PHF13Q86YI8 300 aaPredicted RBP2.93□□□□□ -1.94
PTCD3-205ENST00000464541 SLC25A45Q8N413 288 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 OR11H1Q8NG94 326 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 OR4M1Q8NGD0 313 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 OR1J4Q8NGS1 313 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 OR11H2Q8NH07 326 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 OR10A6Q8NH74 314 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 OR13C6PQ8NH95 151 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 CIRBP-AS1Q8TBR5 109 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 TNFAIP8L1Q8WVP5 186 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 DIRAS2Q96HU8 199 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 YPEL4Q96NS1 127 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 SPACA5Q96QH8 159 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 KLF6Q99612 283 aaPredicted RBP2.93□□□□□ -1.94
PTCD3-205ENST00000464541 FAM96AQ9H5X1 160 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 INIPQ9NRY2 104 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 ANGPT4Q9Y264 503 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 ZNF780BQ9Y6R6 833 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 CLUHO75153 1309 aa2.93□□□□□ -1.94
PTCD3-205ENST00000464541 A0A0X1KG70 313 aa2.92□□□□□ -1.94
PTCD3-205ENST00000464541 C9JQL5 133 aa2.92□□□□□ -1.94
PTCD3-205ENST00000464541 H0YJW9 148 aa2.92□□□□□ -1.94
PTCD3-205ENST00000464541 C15orf65H3BRN8 121 aa2.92□□□□□ -1.94
PTCD3-205ENST00000464541 UPK1AO00322 258 aa2.92□□□□□ -1.94
PTCD3-205ENST00000464541 CHST10O43529 356 aa2.92□□□□□ -1.94
PTCD3-205ENST00000464541 COX7A2P2O60397 106 aa2.92□□□□□ -1.94
PTCD3-205ENST00000464541 IGKV4-1P06312 121 aa2.92□□□□□ -1.94
PTCD3-205ENST00000464541 CRHP06850 196 aa2.92□□□□□ -1.94
PTCD3-205ENST00000464541 SULT1A3P0DMM9 295 aa2.92□□□□□ -1.94
PTCD3-205ENST00000464541 SULT1A4P0DMN0 295 aa2.92□□□□□ -1.94
PTCD3-205ENST00000464541 IDO1P14902 403 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms