RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 AMY2AP04746 511 aa14.14□□□□□ -0.15
VPS52-214ENST00000463486 FCGR3AP08637 254 aa14.14□□□□□ -0.15
VPS52-214ENST00000463486 REG1BP48304 166 aa14.14□□□□□ -0.15
VPS52-214ENST00000463486 VBP1P61758 197 aa14.14□□□□□ -0.15
VPS52-214ENST00000463486 BLCAPP62952 87 aa14.14□□□□□ -0.15
VPS52-214ENST00000463486 HERPUD1Q15011 391 aa14.14□□□□□ -0.15
VPS52-214ENST00000463486 ZNF260Q3ZCT1 412 aa14.14□□□□□ -0.15
VPS52-214ENST00000463486 Q6ZS46 218 aa14.14□□□□□ -0.15
VPS52-214ENST00000463486 ANKRD13BQ86YJ7 626 aa14.14□□□□□ -0.15
VPS52-214ENST00000463486 OR8H3Q8N146 312 aa14.14□□□□□ -0.15
VPS52-214ENST00000463486 OR56B4Q8NH76 319 aa14.14□□□□□ -0.15
VPS52-214ENST00000463486 SETD6Q8TBK2 473 aa14.14□□□□□ -0.15
VPS52-214ENST00000463486 RTN4IP1Q8WWV3 396 aaPredicted RBP14.14□□□□□ -0.15
VPS52-214ENST00000463486 SLC25A46Q96AG3 418 aa14.14□□□□□ -0.15
VPS52-214ENST00000463486 AGMATQ9BSE5 352 aa14.14□□□□□ -0.15
VPS52-214ENST00000463486 RANBP3Q9H6Z4 567 aaPredicted RBP14.14□□□□□ -0.15
VPS52-214ENST00000463486 ABRACLQ9P1F3 81 aa14.14□□□□□ -0.15
VPS52-214ENST00000463486 SPATA2Q9UM82 520 aa14.14□□□□□ -0.15
VPS52-214ENST00000463486 MGAM2Q2M2H8 2515 aa14.14□□□□□ -0.15
VPS52-214ENST00000463486 A0A075B6Q4 140 aa14.13□□□□□ -0.15
VPS52-214ENST00000463486 TRDCB7Z8K6 153 aa14.13□□□□□ -0.15
VPS52-214ENST00000463486 GABARAPO95166 117 aa14.13□□□□□ -0.15
VPS52-214ENST00000463486 GAPDHP04406 335 aaKnown RBP14.13□□□□□ -0.15
VPS52-214ENST00000463486 CD3GP09693 182 aa14.13□□□□□ -0.15
VPS52-214ENST00000463486 MNDAP41218 407 aa14.13□□□□□ -0.15
VPS52-214ENST00000463486 SRSF4Q08170 494 aaKnown RBP14.13□□□□□ -0.15
VPS52-214ENST00000463486 EBI3Q14213 229 aa14.13□□□□□ -0.15
VPS52-214ENST00000463486 CROCCP3Q8IVE0 287 aa14.13□□□□□ -0.15
VPS52-214ENST00000463486 IL1F10Q8WWZ1 152 aa14.13□□□□□ -0.15
VPS52-214ENST00000463486 RBM14Q96PK6 669 aaKnown RBP14.13□□□□□ -0.15
VPS52-214ENST00000463486 IFI27L2Q9H2X8 130 aa14.13□□□□□ -0.15
VPS52-214ENST00000463486 OR1A1Q9P1Q5 309 aa14.13□□□□□ -0.15
VPS52-214ENST00000463486 ZNF230Q9UIE0 474 aaPredicted RBP14.13□□□□□ -0.15
VPS52-214ENST00000463486 MGAT4AQ9UM21 535 aa14.13□□□□□ -0.15
VPS52-214ENST00000463486 RNF114Q9Y508 228 aa14.13□□□□□ -0.15
VPS52-214ENST00000463486 IGKV1D-8A0A087WSZ0 117 aa14.12□□□□□ -0.15
VPS52-214ENST00000463486 SSX5O60225 188 aa14.12□□□□□ -0.15
VPS52-214ENST00000463486 OR2F2O95006 317 aa14.12□□□□□ -0.15
VPS52-214ENST00000463486 SNRNP70P08621 437 aaKnown RBP14.12□□□□□ -0.15
VPS52-214ENST00000463486 SRSF7Q16629 238 aaKnown RBP eCLIP14.12□□□□□ -0.15
VPS52-214ENST00000463486 HACD4Q5VWC8 232 aa14.12□□□□□ -0.15
VPS52-214ENST00000463486 Q6ZS49 121 aa14.12□□□□□ -0.15
VPS52-214ENST00000463486 Q8N6K4 173 aa14.12□□□□□ -0.15
VPS52-214ENST00000463486 RBMXL1Q96E39 390 aaKnown RBP14.12□□□□□ -0.15
VPS52-214ENST00000463486 ZNF251Q9BRH9 671 aa14.12□□□□□ -0.15
VPS52-214ENST00000463486 ABHD14AQ9BUJ0 271 aa14.12□□□□□ -0.15
VPS52-214ENST00000463486 NPFFR1Q9GZQ6 430 aa14.12□□□□□ -0.15
VPS52-214ENST00000463486 TOLLIPQ9H0E2 274 aa14.12□□□□□ -0.15
VPS52-214ENST00000463486 SERTAD4Q9NUC0 356 aa14.12□□□□□ -0.15
VPS52-214ENST00000463486 ZNF736B4DX44 427 aaPredicted RBP14.11□□□□□ -0.15
VPS52-214ENST00000463486 ITGB1BP1O14713 200 aa14.11□□□□□ -0.15
VPS52-214ENST00000463486 GSTP1P09211 210 aaKnown RBP14.11□□□□□ -0.15
VPS52-214ENST00000463486 GSTT2P0CG29 244 aa14.11□□□□□ -0.15
VPS52-214ENST00000463486 GSTT2BP0CG30 244 aa14.11□□□□□ -0.15
VPS52-214ENST00000463486 ARHGDIBP52566 201 aa14.11□□□□□ -0.15
VPS52-214ENST00000463486 ARL6IP1Q15041 203 aa14.11□□□□□ -0.15
VPS52-214ENST00000463486 SHISA2Q6UWI4 295 aa14.11□□□□□ -0.15
VPS52-214ENST00000463486 C16orf82Q7Z2V1 217 aa14.11□□□□□ -0.15
VPS52-214ENST00000463486 OR4C13Q8NGP0 309 aa14.11□□□□□ -0.15
VPS52-214ENST00000463486 CAPSLQ8WWF8 208 aa14.11□□□□□ -0.15
VPS52-214ENST00000463486 MAFIPQ8WZ33 124 aa14.11□□□□□ -0.15
VPS52-214ENST00000463486 C11orf54Q9H0W9 315 aaPredicted RBP14.11□□□□□ -0.15
VPS52-214ENST00000463486 ABCG5Q9H222 651 aa14.11□□□□□ -0.15
VPS52-214ENST00000463486 TMEM235A6NFC5 223 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 FABP7O15540 132 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 LANCL1O43813 399 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 PROP1O75360 226 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 SCGNO76038 276 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 RGS11O94810 467 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 FAM106CPP0CH98 169 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 ZBTB25P24278 435 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 IL3RAP26951 378 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 CEACAM6P40199 344 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 OR3A3P47888 321 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 SERPINB10P48595 397 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 IGSF11Q5DX21 431 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 GPR107Q5VW38 600 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 ZNF833PQ6ZTB9 187 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 IZUMO1Q8IYV9 350 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 LYG1Q8N1E2 194 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 OR4A4PQ8NGN8 299 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 WIPF2Q8TF74 440 aaPredicted RBP14.1□□□□□ -0.15
VPS52-214ENST00000463486 CITED1Q99966 193 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 SLC25A33Q9BSK2 321 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 CABLES2Q9BTV7 478 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 SLC23A1Q9UHI7 598 aa14.1□□□□□ -0.15
VPS52-214ENST00000463486 SAA2-SAA4A0A096LPE2 208 aa14.09□□□□□ -0.15
VPS52-214ENST00000463486 TRBV6-7A0A0A0MS04 114 aa14.09□□□□□ -0.15
VPS52-214ENST00000463486 A0A0A6YYH2 397 aa14.09□□□□□ -0.15
VPS52-214ENST00000463486 IGHV3-72A0A0B4J1Y9 119 aa14.09□□□□□ -0.15
VPS52-214ENST00000463486 A6NJ64 397 aa14.09□□□□□ -0.15
VPS52-214ENST00000463486 ST8SIA5O15466 376 aa14.09□□□□□ -0.15
VPS52-214ENST00000463486 DIRAS3O95661 229 aa14.09□□□□□ -0.15
VPS52-214ENST00000463486 SAA2P0DJI9 122 aaPredicted RBP14.09□□□□□ -0.15
VPS52-214ENST00000463486 DTYMKP23919 212 aa14.09□□□□□ -0.15
VPS52-214ENST00000463486 PNLIPRP3Q17RR3 467 aa14.09□□□□□ -0.15
VPS52-214ENST00000463486 MOB3BQ86TA1 216 aa14.09□□□□□ -0.15
VPS52-214ENST00000463486 TGIF2LXQ8IUE1 241 aa14.09□□□□□ -0.15
VPS52-214ENST00000463486 OR2AK2Q8NG84 335 aa14.09□□□□□ -0.15
VPS52-214ENST00000463486 NUDCD2Q8WVJ2 157 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms