RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 MEOX2P50222 304 aa12.13□□□□□ -0.47
HDAC6-213ENST00000462730 S100A10P60903 97 aa12.13□□□□□ -0.47
HDAC6-213ENST00000462730 SSTP61278 116 aa12.13□□□□□ -0.47
HDAC6-213ENST00000462730 BLOC1S1P78537 153 aa12.13□□□□□ -0.47
HDAC6-213ENST00000462730 SRSF3P84103 164 aaKnown RBP12.13□□□□□ -0.47
HDAC6-213ENST00000462730 IL15RAQ13261 267 aa12.13□□□□□ -0.47
HDAC6-213ENST00000462730 RAB32Q13637 225 aa12.13□□□□□ -0.47
HDAC6-213ENST00000462730 MEX3BQ6ZN04 569 aaKnown RBP12.13□□□□□ -0.47
HDAC6-213ENST00000462730 LYZL2Q7Z4W2 148 aa12.13□□□□□ -0.47
HDAC6-213ENST00000462730 CBLN2Q8IUK8 224 aa12.13□□□□□ -0.47
HDAC6-213ENST00000462730 GCSAMQ8N6F7 178 aa12.13□□□□□ -0.47
HDAC6-213ENST00000462730 LRTM2Q8N967 370 aa12.13□□□□□ -0.47
HDAC6-213ENST00000462730 DMBX1Q8NFW5 382 aa12.13□□□□□ -0.47
HDAC6-213ENST00000462730 LINC01560Q8TB33 94 aa12.13□□□□□ -0.47
HDAC6-213ENST00000462730 C18orf12Q96KH6 178 aa12.13□□□□□ -0.47
HDAC6-213ENST00000462730 ESRP2Q9H6T0 727 aaKnown RBP12.13□□□□□ -0.47
HDAC6-213ENST00000462730 MMP26Q9NRE1 261 aa12.13□□□□□ -0.47
HDAC6-213ENST00000462730 ERRFI1Q9UJM3 462 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-213ENST00000462730 FAM157CP0CG43 387 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 SMIM6P0DI80 62 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 LYL1P12980 280 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 TNFSF4P23510 183 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 GABRA2P47869 451 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 PRSS54Q6PEW0 395 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 FAM90A1Q86YD7 464 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 OR10V1Q8NGI7 309 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 OR1L1Q8NH94 360 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 PLPPR2Q96GM1 343 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 CNTNAP3BQ96NU0 1288 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 GPHA2Q96T91 129 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 ZFP57Q9NU63 452 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 OR5AC2Q9NZP5 309 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 UBE2J1Q9Y385 318 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-213ENST00000462730 IGKV1D-17A0A075B6S4 117 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 MSGN1A6NI15 193 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 OR4A8P0C604 315 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 FOLR2P14207 255 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 CD80P33681 288 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 GATA4P43694 442 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 SRPXP78539 464 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 TESK1Q15569 626 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 ADIPOQQ15848 244 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 KRBOX4Q5JUW0 171 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 NCMAPQ5T1S8 102 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 DMRTC2Q8IXT2 367 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-213ENST00000462730 CMTM1Q8IZ96 169 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 TCEAL7Q9BRU2 100 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 SEC11CQ9BY50 192 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 TMEM222Q9H0R3 208 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 ZDHHC8Q9ULC8 765 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 USP24Q9UPU5 2620 aa12.12□□□□□ -0.47
HDAC6-213ENST00000462730 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-213ENST00000462730 OOEPA6NGQ2 149 aa12.11□□□□□ -0.47
HDAC6-213ENST00000462730 C12orf77C9JDV5 145 aa12.11□□□□□ -0.47
HDAC6-213ENST00000462730 TNFSF12O43508 249 aa12.11□□□□□ -0.47
HDAC6-213ENST00000462730 PET100P0DJ07 73 aa12.11□□□□□ -0.47
HDAC6-213ENST00000462730 GLIPR1P48060 266 aa12.11□□□□□ -0.47
HDAC6-213ENST00000462730 EIF5AP63241 154 aaKnown RBP12.11□□□□□ -0.47
HDAC6-213ENST00000462730 AVPI1Q5T686 147 aa12.11□□□□□ -0.47
HDAC6-213ENST00000462730 TMEM268Q5VZI3 342 aa12.11□□□□□ -0.47
HDAC6-213ENST00000462730 AQP10Q96PS8 301 aa12.11□□□□□ -0.47
HDAC6-213ENST00000462730 KCNJ16Q9NPI9 418 aa12.11□□□□□ -0.47
HDAC6-213ENST00000462730 LPAR3Q9UBY5 353 aa12.11□□□□□ -0.47
HDAC6-213ENST00000462730 IL19Q9UHD0 177 aa12.11□□□□□ -0.47
HDAC6-213ENST00000462730 ZNF705EA8MWA4 302 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-213ENST00000462730 SHISA9B4DS77 424 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 LHBP01229 141 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 GNLYP22749 145 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 S100GP29377 79 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 EDDM3AQ14507 147 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 MST1LQ2TV78 715 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 FAM209BQ5JX69 171 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 FOXRED2Q8IWF2 684 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 TPRX1Q8N7U7 411 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 MRGPRDQ8TDS7 321 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 PARP12Q9H0J9 701 aaKnown RBP12.1□□□□□ -0.47
HDAC6-213ENST00000462730 TMEM231Q9H6L2 316 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 GCM1Q9NP62 436 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 TREM1Q9NP99 234 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 UQCC1Q9NVA1 299 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 RNF7Q9UBF6 113 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 DIDO1Q9BTC0 2240 aaKnown RBP12.1□□□□□ -0.47
HDAC6-213ENST00000462730 ZNF737O75373 536 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 PGLYRP1O75594 196 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-213ENST00000462730 SCGB1D2O95969 90 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 F12P00748 615 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-213ENST00000462730 HBZP02008 142 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 IL2RGP31785 369 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 CEACAM6P40199 344 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 AKR1D1P51857 326 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 PJVKQ0ZLH3 352 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 SLC35G3Q8N808 338 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 KCNS2Q9ULS6 477 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 RBM7Q9Y580 266 aaKnown RBP12.1□□□□□ -0.47
HDAC6-213ENST00000462730 POMT1Q9Y6A1 747 aa12.1□□□□□ -0.47
HDAC6-213ENST00000462730 NPBWR1P48145 328 aa12.09□□□□□ -0.47
HDAC6-213ENST00000462730 TFF3Q07654 80 aa12.09□□□□□ -0.47
HDAC6-213ENST00000462730 FAM201AQ5SY85 155 aa12.09□□□□□ -0.47
HDAC6-213ENST00000462730 ZNF695Q8IW36 515 aa12.09□□□□□ -0.47
HDAC6-213ENST00000462730 OR13A1Q8NGR1 328 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms