RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 C5orf42Q9H799 3197 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 TRAV8-3A0A0A6YYJ7 113 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 PSG2P11465 335 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 CD99P14209 185 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 SYCNQ0VAF6 134 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 MARC1Q5VT66 337 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 CST9Q5W186 159 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 SLC36A1Q7Z2H8 476 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 OR1P1Q8NH06 330 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 RHOXF1Q8NHV9 184 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 SMIM8Q96KF7 97 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 HSD17B10Q99714 261 aaKnown RBP1.95□□□□□ -2.1
SMC4-203ENST00000462668 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.95□□□□□ -2.1
SMC4-203ENST00000462668 DNHD1Q96M86 4753 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 ZNF705GA8MUZ8 300 aaPredicted RBP1.95□□□□□ -2.1
SMC4-203ENST00000462668 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.95□□□□□ -2.1
SMC4-203ENST00000462668 M0R1X1 148 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 DENRO43583 198 aaKnown RBP1.95□□□□□ -2.1
SMC4-203ENST00000462668 ENTPD6O75354 484 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 CCNE2O96020 404 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 CALB1P05937 261 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 CTSEP14091 401 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 ME2P23368 584 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 RAB7AP51149 207 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 TTMPQ5BVD1 217 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 ELP2Q6IA86 826 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 OPN5Q6U736 354 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 ZNF550Q7Z398 422 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 FAM19A3Q7Z5A8 133 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 CCNYL1Q8N7R7 359 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 OR8A1Q8NGG7 326 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 OR52N1Q8NH53 320 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 SPPL2BQ8TCT7 592 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 SLC2A9Q9NRM0 540 aa1.95□□□□□ -2.1
SMC4-203ENST00000462668 CD300LBA8K4G0 201 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 MFNGO00587 321 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 LINC01565O15544 149 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 OR2A4O95047 310 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 IGHMP01871 453 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 TYMSP04818 313 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 ZNF688P0C7X2 276 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 AP2S1P53680 142 aaPredicted RBP1.94□□□□□ -2.1
SMC4-203ENST00000462668 CDK5Q00535 292 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 SSX1Q16384 188 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 HES3Q5TGS1 186 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 FAM222AQ5U5X8 452 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 OR2A7Q96R45 310 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 INSIG2Q9Y5U4 225 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 ENPP4Q9Y6X5 453 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 NBEAQ8NFP9 2946 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 LRRC37A2A6NM11 1700 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 GMNCA6NCL1 334 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 ENSAO43768 121 aaKnown RBP1.94□□□□□ -2.1
SMC4-203ENST00000462668 ZNF861PO60384 105 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 STX10O60499 249 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 CXCL2P19875 107 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 ZNF239Q16600 458 aaKnown RBP1.94□□□□□ -2.1
SMC4-203ENST00000462668 TMEM97Q5BJF2 176 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 GSG1LQ6UXU4 331 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 Q6ZR03 302 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 NR2C2APQ86WQ0 139 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 DCAF4L2Q8NA75 395 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 ASB17Q8WXJ9 295 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 GHSRQ92847 366 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 YLPM1P49750 1951 aaKnown RBP1.94□□□□□ -2.1
SMC4-203ENST00000462668 KIF15Q9NS87 1388 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 NAIPQ13075 1403 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 EEA1Q15075 1411 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 CD163L1Q9NR16 1453 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 CLDN24A6NM45 220 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 H3BSA7 217 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 OR4E1P0C645 316 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 DTYMKP23919 212 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 TALDO1P37837 337 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 SERPINB9P50453 376 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 SPIN3Q5JUX0 258 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 GUSBP11Q6P575 273 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 CLDN22Q8N7P3 220 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 CIRBP-AS1Q8TBR5 109 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 FXYD5Q96DB9 178 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 TMA16Q96EY4 203 aaKnown RBP1.94□□□□□ -2.1
SMC4-203ENST00000462668 NIPSNAP1Q9BPW8 284 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 TMEM208Q9BTX3 173 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 A0A0G2JMZ2 1700 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 OVOS2A0A0J9YW53 1432 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 OVOS2Q6IE36 1432 aa1.94□□□□□ -2.1
SMC4-203ENST00000462668 A0A096LNJ9 63 aa1.93□□□□□ -2.1
SMC4-203ENST00000462668 KCNK1O00180 336 aa1.93□□□□□ -2.1
SMC4-203ENST00000462668 PHOX2AO14813 284 aa1.93□□□□□ -2.1
SMC4-203ENST00000462668 PFDN6O15212 129 aa1.93□□□□□ -2.1
SMC4-203ENST00000462668 LINC00614P0C842 121 aa1.93□□□□□ -2.1
SMC4-203ENST00000462668 AKR1C4P17516 323 aa1.93□□□□□ -2.1
SMC4-203ENST00000462668 ELK1P19419 428 aa1.93□□□□□ -2.1
SMC4-203ENST00000462668 ATP6V1C2Q8NEY4 427 aa1.93□□□□□ -2.1
SMC4-203ENST00000462668 OLFM3Q96PB7 478 aa1.93□□□□□ -2.1
SMC4-203ENST00000462668 FBXO5Q9UKT4 447 aa1.93□□□□□ -2.1
SMC4-203ENST00000462668 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.93□□□□□ -2.1
SMC4-203ENST00000462668 IGHV3OR15-7A0A075B7D8 119 aa1.93□□□□□ -2.1
SMC4-203ENST00000462668 ISPDA4D126 451 aa1.93□□□□□ -2.1
SMC4-203ENST00000462668 STK16O75716 305 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms