RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 UNC119Q13432 240 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 CENPVQ7Z7K6 275 aaPredicted RBP13.87□□□□□ -0.19
MRPL28-207ENST00000461550 MOB3BQ86TA1 216 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 NDUFA11Q86Y39 141 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 ZBTB8BQ8NAP8 495 aaPredicted RBP13.87□□□□□ -0.19
MRPL28-207ENST00000461550 OR52M1Q8NGK5 317 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 R3HDM4Q96D70 268 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 BCL7BQ9BQE9 202 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 IGHV1-3A0A0C4DH29 117 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 FAM90A10PA6NDY2 464 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 FAM90A7PA6NKC0 464 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 NOTOA8MTQ0 251 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 TMEM14DPA8MWL7 114 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 FAM90A23PA8MXZ1 464 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 G3V4G9 280 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 PDCD6O75340 191 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 HBZP02008 142 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 QRFPP83859 136 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 PLA2G7Q13093 441 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 TCTEX1D4Q5JR98 221 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 THNSL2Q86YJ6 484 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 OR8H3Q8N146 312 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 KCNG3Q8TAE7 436 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 TMEM59Q9BXS4 323 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 GNG12Q9UBI6 72 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 DAPK2Q9UIK4 370 aa13.87□□□□□ -0.19
MRPL28-207ENST00000461550 SPINT2O43291 252 aa13.86□□□□□ -0.19
MRPL28-207ENST00000461550 HNRNPCP07910 306 aaKnown RBP eCLIP13.86□□□□□ -0.19
MRPL28-207ENST00000461550 C6orf183Q5T699 404 aa13.86□□□□□ -0.19
MRPL28-207ENST00000461550 GAPTQ8N292 157 aa13.86□□□□□ -0.19
MRPL28-207ENST00000461550 NICN1Q9BSH3 213 aa13.86□□□□□ -0.19
MRPL28-207ENST00000461550 TMEM272A0A1B0GTI8 110 aa13.85□□□□□ -0.19
MRPL28-207ENST00000461550 M0QZK8 103 aa13.85□□□□□ -0.19
MRPL28-207ENST00000461550 GAPDHP04406 335 aaKnown RBP13.85□□□□□ -0.19
MRPL28-207ENST00000461550 RPS19P39019 145 aaKnown RBP13.85□□□□□ -0.19
MRPL28-207ENST00000461550 SERPINB10P48595 397 aa13.85□□□□□ -0.19
MRPL28-207ENST00000461550 RPS27AP62979 156 aaKnown RBP13.85□□□□□ -0.19
MRPL28-207ENST00000461550 CD83Q01151 205 aa13.85□□□□□ -0.19
MRPL28-207ENST00000461550 ZNF816Q0VGE8 651 aaPredicted RBP13.85□□□□□ -0.19
MRPL28-207ENST00000461550 GNMTQ14749 295 aa13.85□□□□□ -0.19
MRPL28-207ENST00000461550 SPCS2Q15005 226 aa13.85□□□□□ -0.19
MRPL28-207ENST00000461550 SFXN4Q6P4A7 337 aa13.85□□□□□ -0.19
MRPL28-207ENST00000461550 LINC00311Q8N616 119 aa13.85□□□□□ -0.19
MRPL28-207ENST00000461550 C5orf56Q8N8D9 126 aa13.85□□□□□ -0.19
MRPL28-207ENST00000461550 ZNF439Q8NDP4 499 aa13.85□□□□□ -0.19
MRPL28-207ENST00000461550 MRPL30Q8TCC3 161 aaKnown RBP13.85□□□□□ -0.19
MRPL28-207ENST00000461550 SULT4A1Q9BR01 284 aa13.85□□□□□ -0.19
MRPL28-207ENST00000461550 TAF9BQ9HBM6 251 aa13.85□□□□□ -0.19
MRPL28-207ENST00000461550 RHBDL2Q9NX52 303 aa13.85□□□□□ -0.19
MRPL28-207ENST00000461550 CHATP28329 748 aa13.84□□□□□ -0.19
MRPL28-207ENST00000461550 ZNF134P52741 427 aa13.84□□□□□ -0.19
MRPL28-207ENST00000461550 CT45A1Q5HYN5 189 aa13.84□□□□□ -0.19
MRPL28-207ENST00000461550 IDNKQ5T6J7 187 aa13.84□□□□□ -0.19
MRPL28-207ENST00000461550 LINC00299Q6ZSB3 139 aa13.84□□□□□ -0.19
MRPL28-207ENST00000461550 OR2W3Q7Z3T1 314 aa13.84□□□□□ -0.19
MRPL28-207ENST00000461550 C6orf201Q7Z4U5 140 aa13.84□□□□□ -0.19
MRPL28-207ENST00000461550 CT45A3Q8NHU0 189 aa13.84□□□□□ -0.19
MRPL28-207ENST00000461550 RTN4IP1Q8WWV3 396 aaPredicted RBP13.84□□□□□ -0.19
MRPL28-207ENST00000461550 NEDD4LQ96PU5 975 aa13.84□□□□□ -0.19
MRPL28-207ENST00000461550 FAAP24Q9BTP7 215 aa13.84□□□□□ -0.19
MRPL28-207ENST00000461550 PRKDCP78527 4128 aaKnown RBP13.83□□□□□ -0.2
MRPL28-207ENST00000461550 A0A0A6YYD4 124 aa13.83□□□□□ -0.2
MRPL28-207ENST00000461550 ZNF736B4DX44 427 aaPredicted RBP13.83□□□□□ -0.2
MRPL28-207ENST00000461550 LDLRAD4O15165 306 aa13.83□□□□□ -0.2
MRPL28-207ENST00000461550 GLAP06280 429 aa13.83□□□□□ -0.2
MRPL28-207ENST00000461550 SNRPBP14678 240 aaKnown RBP13.83□□□□□ -0.2
MRPL28-207ENST00000461550 KHDC1LQ5JSQ8 128 aa13.83□□□□□ -0.2
MRPL28-207ENST00000461550 SLC25A48Q6ZT89 311 aaKnown RBP13.83□□□□□ -0.2
MRPL28-207ENST00000461550 C8orf31Q8N9H6 132 aa13.83□□□□□ -0.2
MRPL28-207ENST00000461550 OR4F17Q8NGA8 305 aa13.83□□□□□ -0.2
MRPL28-207ENST00000461550 OR52L2PQ8NGH6 319 aa13.83□□□□□ -0.2
MRPL28-207ENST00000461550 ST6GALNAC6Q969X2 333 aa13.83□□□□□ -0.2
MRPL28-207ENST00000461550 NOL4LQ96MY1 436 aaPredicted RBP13.83□□□□□ -0.2
MRPL28-207ENST00000461550 OR4F4Q96R69 305 aa13.83□□□□□ -0.2
MRPL28-207ENST00000461550 TM2D1Q9BX74 207 aa13.83□□□□□ -0.2
MRPL28-207ENST00000461550 LPAR5Q9H1C0 372 aa13.83□□□□□ -0.2
MRPL28-207ENST00000461550 DCSTAMPQ9H295 470 aa13.83□□□□□ -0.2
MRPL28-207ENST00000461550 MBNL3Q9NUK0 354 aaKnown RBP13.83□□□□□ -0.2
MRPL28-207ENST00000461550 TCRBV4S1A1TA0A5B7 111 aa13.82□□□□□ -0.2
MRPL28-207ENST00000461550 SOCS1O15524 211 aa13.82□□□□□ -0.2
MRPL28-207ENST00000461550 CA11O75493 328 aa13.82□□□□□ -0.2
MRPL28-207ENST00000461550 IL3RAP26951 378 aa13.82□□□□□ -0.2
MRPL28-207ENST00000461550 PPP1CCP36873 323 aaKnown RBP13.82□□□□□ -0.2
MRPL28-207ENST00000461550 TRAT1Q6PIZ9 186 aa13.82□□□□□ -0.2
MRPL28-207ENST00000461550 ZNF329Q86UD4 541 aa13.82□□□□□ -0.2
MRPL28-207ENST00000461550 EAF1Q96JC9 268 aaPredicted RBP13.82□□□□□ -0.2
MRPL28-207ENST00000461550 URM1Q9BTM9 101 aaKnown RBP13.82□□□□□ -0.2
MRPL28-207ENST00000461550 RAB9BQ9NP90 201 aa13.82□□□□□ -0.2
MRPL28-207ENST00000461550 OR2S2Q9NQN1 319 aa13.82□□□□□ -0.2
MRPL28-207ENST00000461550 KCNIP1Q9NZI2 227 aa13.82□□□□□ -0.2
MRPL28-207ENST00000461550 LINC00527Q9UJ94 153 aa13.82□□□□□ -0.2
MRPL28-207ENST00000461550 RAB22AQ9UL26 194 aa13.82□□□□□ -0.2
MRPL28-207ENST00000461550 PAIP2BQ9ULR5 123 aaKnown RBP13.82□□□□□ -0.2
MRPL28-207ENST00000461550 NCBP2LA6PVI3 153 aaKnown RBP13.81□□□□□ -0.2
MRPL28-207ENST00000461550 PRB2P02812 416 aaPredicted RBP13.81□□□□□ -0.2
MRPL28-207ENST00000461550 BLVRBP30043 206 aaPredicted RBP13.81□□□□□ -0.2
MRPL28-207ENST00000461550 VEGFCP49767 419 aa13.81□□□□□ -0.2
MRPL28-207ENST00000461550 BEAN1Q3B7T3 259 aa13.81□□□□□ -0.2
MRPL28-207ENST00000461550 OXLD1Q5BKU9 147 aa13.81□□□□□ -0.2
MRPL28-207ENST00000461550 SAMD5Q5TGI4 173 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms