RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 OR2AK2Q8NG84 335 aa12.26□□□□□ -0.45
VARS-219ENST00000461328 CITED2Q99967 270 aaPredicted RBP12.26□□□□□ -0.45
VARS-219ENST00000461328 CHCHD6Q9BRQ6 235 aa12.26□□□□□ -0.45
VARS-219ENST00000461328 VCX3AQ9NNX9 186 aa12.26□□□□□ -0.45
VARS-219ENST00000461328 MGAT4AQ9UM21 535 aa12.26□□□□□ -0.45
VARS-219ENST00000461328 A0A075B6Q4 140 aa12.25□□□□□ -0.45
VARS-219ENST00000461328 LDLRAD4O15165 306 aa12.25□□□□□ -0.45
VARS-219ENST00000461328 HSPA12AO43301 675 aa12.25□□□□□ -0.45
VARS-219ENST00000461328 YPEL1O60688 119 aa12.25□□□□□ -0.45
VARS-219ENST00000461328 CD3GP09693 182 aa12.25□□□□□ -0.45
VARS-219ENST00000461328 FGF9P31371 208 aaPredicted RBP12.25□□□□□ -0.45
VARS-219ENST00000461328 ZNF134P52741 427 aa12.25□□□□□ -0.45
VARS-219ENST00000461328 PDLIM3Q53GG5 364 aaPredicted RBP12.25□□□□□ -0.45
VARS-219ENST00000461328 NDUFA11Q86Y39 141 aa12.25□□□□□ -0.45
VARS-219ENST00000461328 C1QL4Q86Z23 238 aa12.25□□□□□ -0.45
VARS-219ENST00000461328 IZUMO1Q8IYV9 350 aa12.25□□□□□ -0.45
VARS-219ENST00000461328 OR2T10Q8NGZ9 312 aa12.25□□□□□ -0.45
VARS-219ENST00000461328 WIPF2Q8TF74 440 aaPredicted RBP12.25□□□□□ -0.45
VARS-219ENST00000461328 RAB3CQ96E17 227 aa12.25□□□□□ -0.45
VARS-219ENST00000461328 YPEL2Q96QA6 119 aa12.25□□□□□ -0.45
VARS-219ENST00000461328 OR51E2Q9H255 320 aa12.25□□□□□ -0.45
VARS-219ENST00000461328 METTL21EPA6NDL7 271 aa12.24□□□□□ -0.45
VARS-219ENST00000461328 NCBP2LA6PVI3 153 aaKnown RBP12.24□□□□□ -0.45
VARS-219ENST00000461328 FOXI3A8MTJ6 420 aaPredicted RBP12.24□□□□□ -0.45
VARS-219ENST00000461328 NOTOA8MTQ0 251 aa12.24□□□□□ -0.45
VARS-219ENST00000461328 OPN1MWP04001 364 aa12.24□□□□□ -0.45
VARS-219ENST00000461328 OPN1MW2P0DN77 364 aa12.24□□□□□ -0.45
VARS-219ENST00000461328 OPN1MW3P0DN78 364 aa12.24□□□□□ -0.45
VARS-219ENST00000461328 SLC2A2P11168 524 aaPredicted RBP12.24□□□□□ -0.45
VARS-219ENST00000461328 CD36P16671 472 aa12.24□□□□□ -0.45
VARS-219ENST00000461328 RAB6AP20340 208 aa12.24□□□□□ -0.45
VARS-219ENST00000461328 ZNF137PP52743 207 aa12.24□□□□□ -0.45
VARS-219ENST00000461328 PLAC9Q5JTB6 97 aa12.24□□□□□ -0.45
VARS-219ENST00000461328 ZNF880Q6PDB4 577 aa12.24□□□□□ -0.45
VARS-219ENST00000461328 CENPVQ7Z7K6 275 aaPredicted RBP12.24□□□□□ -0.45
VARS-219ENST00000461328 OR5AU1Q8NGC0 362 aa12.24□□□□□ -0.45
VARS-219ENST00000461328 ST6GALNAC6Q969X2 333 aa12.24□□□□□ -0.45
VARS-219ENST00000461328 EAF1Q96JC9 268 aaPredicted RBP12.24□□□□□ -0.45
VARS-219ENST00000461328 KCTD7Q96MP8 289 aa12.24□□□□□ -0.45
VARS-219ENST00000461328 SLC23A1Q9UHI7 598 aa12.24□□□□□ -0.45
VARS-219ENST00000461328 DAPK2Q9UIK4 370 aa12.24□□□□□ -0.45
VARS-219ENST00000461328 TRBV6-6A0A0A6YYG2 114 aa12.23□□□□□ -0.45
VARS-219ENST00000461328 ST8SIA5O15466 376 aa12.23□□□□□ -0.45
VARS-219ENST00000461328 LANCL1O43813 399 aa12.23□□□□□ -0.45
VARS-219ENST00000461328 TNFAIP8O95379 198 aa12.23□□□□□ -0.45
VARS-219ENST00000461328 MOSP00540 346 aa12.23□□□□□ -0.45
VARS-219ENST00000461328 AMY1AP04745 511 aa12.23□□□□□ -0.45
VARS-219ENST00000461328 AMY2AP04746 511 aa12.23□□□□□ -0.45
VARS-219ENST00000461328 CD1BP29016 333 aa12.23□□□□□ -0.45
VARS-219ENST00000461328 TMEM50BP56557 158 aa12.23□□□□□ -0.45
VARS-219ENST00000461328 MOGAT2Q3SYC2 334 aa12.23□□□□□ -0.45
VARS-219ENST00000461328 Q6ZPA2 131 aa12.23□□□□□ -0.45
VARS-219ENST00000461328 TPRA1Q86W33 373 aa12.23□□□□□ -0.45
VARS-219ENST00000461328 NR2C2APQ86WQ0 139 aa12.23□□□□□ -0.45
VARS-219ENST00000461328 C5orf56Q8N8D9 126 aa12.23□□□□□ -0.45
VARS-219ENST00000461328 OR4F17Q8NGA8 305 aa12.23□□□□□ -0.45
VARS-219ENST00000461328 OR10R2Q8NGX6 335 aa12.23□□□□□ -0.45
VARS-219ENST00000461328 R3HDM4Q96D70 268 aa12.23□□□□□ -0.45
VARS-219ENST00000461328 OR4F4Q96R69 305 aa12.23□□□□□ -0.45
VARS-219ENST00000461328 ATG5Q9H1Y0 275 aa12.23□□□□□ -0.45
VARS-219ENST00000461328 Q9N2K0 584 aa12.23□□□□□ -0.45
VARS-219ENST00000461328 A0A087WXM4 84 aa12.22□□□□□ -0.45
VARS-219ENST00000461328 FGF16O43320 207 aa12.22□□□□□ -0.45
VARS-219ENST00000461328 GNB3P16520 340 aa12.22□□□□□ -0.45
VARS-219ENST00000461328 SDC2P34741 201 aa12.22□□□□□ -0.45
VARS-219ENST00000461328 MXD1Q05195 221 aa12.22□□□□□ -0.45
VARS-219ENST00000461328 LSAMPQ13449 338 aa12.22□□□□□ -0.45
VARS-219ENST00000461328 KHDC1LQ5JSQ8 128 aa12.22□□□□□ -0.45
VARS-219ENST00000461328 SFXN4Q6P4A7 337 aa12.22□□□□□ -0.45
VARS-219ENST00000461328 TSPAN14Q8NG11 270 aa12.22□□□□□ -0.45
VARS-219ENST00000461328 MRPL20Q9BYC9 149 aaKnown RBP12.22□□□□□ -0.45
VARS-219ENST00000461328 OR1A1Q9P1Q5 309 aa12.22□□□□□ -0.45
VARS-219ENST00000461328 NOTCH1P46531 2555 aa12.21□□□□□ -0.45
VARS-219ENST00000461328 SAA2-SAA4A0A096LPE2 208 aa12.21□□□□□ -0.45
VARS-219ENST00000461328 A0A1W2PRX2 142 aa12.21□□□□□ -0.45
VARS-219ENST00000461328 ZNF736B4DX44 427 aaPredicted RBP12.21□□□□□ -0.45
VARS-219ENST00000461328 SAA2P0DJI9 122 aaPredicted RBP12.21□□□□□ -0.45
VARS-219ENST00000461328 SNRPBP14678 240 aaKnown RBP12.21□□□□□ -0.45
VARS-219ENST00000461328 HIST1H1DP16402 221 aaKnown RBP12.21□□□□□ -0.45
VARS-219ENST00000461328 ZBTB25P24278 435 aa12.21□□□□□ -0.45
VARS-219ENST00000461328 TALDO1P37837 337 aa12.21□□□□□ -0.45
VARS-219ENST00000461328 OR3A3P47888 321 aa12.21□□□□□ -0.45
VARS-219ENST00000461328 ARFRP1Q13795 201 aa12.21□□□□□ -0.45
VARS-219ENST00000461328 EBI3Q14213 229 aa12.21□□□□□ -0.45
VARS-219ENST00000461328 TIMM50Q3ZCQ8 353 aa12.21□□□□□ -0.45
VARS-219ENST00000461328 LY6G6FQ5SQ64 297 aa12.21□□□□□ -0.45
VARS-219ENST00000461328 SLC35E3Q7Z769 313 aa12.21□□□□□ -0.45
VARS-219ENST00000461328 OR4X2Q8NGF9 303 aa12.21□□□□□ -0.45
VARS-219ENST00000461328 EDARADDQ8WWZ3 215 aa12.21□□□□□ -0.45
VARS-219ENST00000461328 PTX4Q96A99 478 aa12.21□□□□□ -0.45
VARS-219ENST00000461328 IFI27L2Q9H2X8 130 aa12.21□□□□□ -0.45
VARS-219ENST00000461328 RNF167Q9H6Y7 350 aa12.21□□□□□ -0.45
VARS-219ENST00000461328 TCRBV4S1A1TA0A5B7 111 aa12.2□□□□□ -0.46
VARS-219ENST00000461328 ADARB2-AS1A8MUL3 147 aa12.2□□□□□ -0.46
VARS-219ENST00000461328 SERPINE3A8MV23 424 aa12.2□□□□□ -0.46
VARS-219ENST00000461328 TRDCB7Z8K6 153 aa12.2□□□□□ -0.46
VARS-219ENST00000461328 MFNGO00587 321 aa12.2□□□□□ -0.46
VARS-219ENST00000461328 FCGR3AP08637 254 aa12.2□□□□□ -0.46
VARS-219ENST00000461328 SCTP09683 121 aa12.2□□□□□ -0.46
VARS-219ENST00000461328 CLEC2LP0C7M8 214 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms