RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 ENDOGQ14249 297 aaKnown RBP2.02□□□□□ -2.09
CLK1-206ENST00000461326 FLOT2Q14254 428 aa2.02□□□□□ -2.09
CLK1-206ENST00000461326 SYCP1Q15431 976 aa2.02□□□□□ -2.09
CLK1-206ENST00000461326 TMEM249Q2WGJ8 235 aa2.02□□□□□ -2.09
CLK1-206ENST00000461326 ACTBL2Q562R1 376 aa2.02□□□□□ -2.09
CLK1-206ENST00000461326 FAM173BQ6P4H8 233 aa2.02□□□□□ -2.09
CLK1-206ENST00000461326 SSX7Q7RTT5 188 aa2.02□□□□□ -2.09
CLK1-206ENST00000461326 TMEM144Q7Z5S9 345 aa2.02□□□□□ -2.09
CLK1-206ENST00000461326 DEFB123Q8N688 67 aa2.02□□□□□ -2.09
CLK1-206ENST00000461326 ERMNQ8TAM6 284 aa2.02□□□□□ -2.09
CLK1-206ENST00000461326 FAM45AQ8TCE6 357 aa2.02□□□□□ -2.09
CLK1-206ENST00000461326 PYURFQ96I23 114 aa2.02□□□□□ -2.09
CLK1-206ENST00000461326 SERPINB11Q96P15 392 aa2.02□□□□□ -2.09
CLK1-206ENST00000461326 PRO3102Q9H379 93 aa2.02□□□□□ -2.09
CLK1-206ENST00000461326 TRIM45Q9H8W5 580 aaPredicted RBP2.02□□□□□ -2.09
CLK1-206ENST00000461326 TMEM38BQ9NVV0 291 aa2.02□□□□□ -2.09
CLK1-206ENST00000461326 TRAPPC1Q9Y5R8 145 aa2.02□□□□□ -2.09
CLK1-206ENST00000461326 RALGAPA2Q2PPJ7 1873 aa2.02□□□□□ -2.09
CLK1-206ENST00000461326 SPTBN5Q9NRC6 3674 aaKnown RBP2.02□□□□□ -2.09
CLK1-206ENST00000461326 CEP290O15078 2479 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 PLXNA4Q9HCM2 1894 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 A0A0C4DFX4 3053 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 IGHV3-21A0A0B4J1V1 117 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 IGHV3-43A0A0B4J1X8 118 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 K7ERS5 55 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 NPPAP01160 153 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 INAFM2P0DMQ5 153 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 TSPOP30536 169 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 UGT2B10P36537 528 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 MAGEA3P43357 314 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 ZNF83P51522 516 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 IL15RAQ13261 267 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 CLEC6AQ6EIG7 209 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 ERICH5Q6P6B1 374 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 ZNF773Q6PK81 442 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 TMEM136Q6ZRR5 245 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 PAGE2Q7Z2X7 111 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 SLC25A45Q8N413 288 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 C3orf22Q8N5N4 141 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 OR2AE1Q8NHA4 323 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 PHOSPHO2Q8TCD6 241 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 DTD1Q8TEA8 209 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 TWIST2Q8WVJ9 160 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 PPWD1Q96BP3 646 aaKnown RBP2.01□□□□□ -2.09
CLK1-206ENST00000461326 FMC1Q96HJ9 113 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 HBEGFQ99075 208 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 ANAPC13Q9BS18 74 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 SLC25A31Q9H0C2 315 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 DSN1Q9H410 356 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 RHOFQ9HBH0 211 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 POFUT2Q9Y2G5 429 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 SNX24Q9Y343 169 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 TCHHQ07283 1943 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 ATG2AQ2TAZ0 1938 aa2.01□□□□□ -2.09
CLK1-206ENST00000461326 SHROOM3Q8TF72 1996 aa2□□□□□ -2.09
CLK1-206ENST00000461326 TRAV8-3A0A0A6YYJ7 113 aa2□□□□□ -2.09
CLK1-206ENST00000461326 SLC16A4O15374 487 aa2□□□□□ -2.09
CLK1-206ENST00000461326 SGCEO43556 437 aa2□□□□□ -2.09
CLK1-206ENST00000461326 TCF21O43680 179 aa2□□□□□ -2.09
CLK1-206ENST00000461326 PDCD6O75340 191 aa2□□□□□ -2.09
CLK1-206ENST00000461326 LYPLA2O95372 231 aa2□□□□□ -2.09
CLK1-206ENST00000461326 IGHG2P01859 326 aa2□□□□□ -2.09
CLK1-206ENST00000461326 HLA-AP01891 365 aaKnown RBP2□□□□□ -2.09
CLK1-206ENST00000461326 SOD3P08294 240 aa2□□□□□ -2.09
CLK1-206ENST00000461326 TGFBR1P36897 503 aa2□□□□□ -2.09
CLK1-206ENST00000461326 ANP32AP39687 249 aaKnown RBP2□□□□□ -2.09
CLK1-206ENST00000461326 CBX5P45973 191 aa2□□□□□ -2.09
CLK1-206ENST00000461326 RBM48Q5RL73 367 aaKnown RBP2□□□□□ -2.09
CLK1-206ENST00000461326 FAM162BQ5T6X4 162 aa2□□□□□ -2.09
CLK1-206ENST00000461326 DPPA2Q7Z7J5 298 aa2□□□□□ -2.09
CLK1-206ENST00000461326 TMEM25Q86YD3 366 aa2□□□□□ -2.09
CLK1-206ENST00000461326 C10orf107Q8IVU9 208 aa2□□□□□ -2.09
CLK1-206ENST00000461326 ZBTB8OSQ8IWT0 167 aa2□□□□□ -2.09
CLK1-206ENST00000461326 AMN1Q8IY45 258 aa2□□□□□ -2.09
CLK1-206ENST00000461326 CPNE9Q8IYJ1 553 aa2□□□□□ -2.09
CLK1-206ENST00000461326 LINC00301Q8NCQ3 95 aa2□□□□□ -2.09
CLK1-206ENST00000461326 ZNF738Q8NE65 137 aa2□□□□□ -2.09
CLK1-206ENST00000461326 OR4C13Q8NGP0 309 aa2□□□□□ -2.09
CLK1-206ENST00000461326 OR8S1Q8NH09 359 aa2□□□□□ -2.09
CLK1-206ENST00000461326 ANGPTL6Q8NI99 470 aa2□□□□□ -2.09
CLK1-206ENST00000461326 OR5P2Q8WZ92 322 aa2□□□□□ -2.09
CLK1-206ENST00000461326 LRRC45Q96CN5 670 aa2□□□□□ -2.09
CLK1-206ENST00000461326 OR2V2Q96R30 315 aa2□□□□□ -2.09
CLK1-206ENST00000461326 MED10Q9BTT4 135 aa2□□□□□ -2.09
CLK1-206ENST00000461326 DHX35Q9H5Z1 703 aaKnown RBP2□□□□□ -2.09
CLK1-206ENST00000461326 IFT46Q9NQC8 304 aa2□□□□□ -2.09
CLK1-206ENST00000461326 XPNPEP1Q9NQW7 623 aa2□□□□□ -2.09
CLK1-206ENST00000461326 CD300AQ9UGN4 299 aa2□□□□□ -2.09
CLK1-206ENST00000461326 CFAP45Q9UL16 551 aa2□□□□□ -2.09
CLK1-206ENST00000461326 COL4A6Q14031 1691 aa1.99□□□□□ -2.09
CLK1-206ENST00000461326 PDCD11Q14690 1871 aaKnown RBP1.99□□□□□ -2.09
CLK1-206ENST00000461326 TRIOBPQ9H2D6 2365 aa1.99□□□□□ -2.09
CLK1-206ENST00000461326 TRIOO75962 3097 aa1.99□□□□□ -2.09
CLK1-206ENST00000461326 TRAV8-2A0A0B4J237 113 aa1.99□□□□□ -2.09
CLK1-206ENST00000461326 IGKV2-24A0A0C4DH68 120 aa1.99□□□□□ -2.09
CLK1-206ENST00000461326 A0A1B0GX12 115 aa1.99□□□□□ -2.09
CLK1-206ENST00000461326 ENTPD6O75354 484 aa1.99□□□□□ -2.09
CLK1-206ENST00000461326 YEATS4O95619 227 aa1.99□□□□□ -2.09
CLK1-206ENST00000461326 CA2P00918 260 aa1.99□□□□□ -2.09
CLK1-206ENST00000461326 SLC35E2BP0CK96 405 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms