RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 LDLRAD2Q5SZI1 272 aa11.18□□□□□ -0.62
CHRD-209ENST00000461120 PYHIN1Q6K0P9 492 aa11.18□□□□□ -0.62
CHRD-209ENST00000461120 LHFPL4Q7Z7J7 247 aa11.18□□□□□ -0.62
CHRD-209ENST00000461120 CCDC190Q86UF4 302 aa11.18□□□□□ -0.62
CHRD-209ENST00000461120 LINC00311Q8N616 119 aa11.18□□□□□ -0.62
CHRD-209ENST00000461120 C17orf50Q8WW18 174 aa11.18□□□□□ -0.62
CHRD-209ENST00000461120 AJUBAQ96IF1 538 aa11.18□□□□□ -0.62
CHRD-209ENST00000461120 YPEL2Q96QA6 119 aa11.18□□□□□ -0.62
CHRD-209ENST00000461120 SLC6A7Q99884 636 aa11.18□□□□□ -0.62
CHRD-209ENST00000461120 MMP28Q9H239 520 aa11.18□□□□□ -0.62
CHRD-209ENST00000461120 IFT46Q9NQC8 304 aa11.18□□□□□ -0.62
CHRD-209ENST00000461120 OR1A1Q9P1Q5 309 aa11.18□□□□□ -0.62
CHRD-209ENST00000461120 ZNRD1Q9P1U0 126 aa11.18□□□□□ -0.62
CHRD-209ENST00000461120 SLC23A1Q9UHI7 598 aa11.18□□□□□ -0.62
CHRD-209ENST00000461120 ANXA10Q9UJ72 324 aa11.18□□□□□ -0.62
CHRD-209ENST00000461120 TBL2Q9Y4P3 447 aaKnown RBP11.18□□□□□ -0.62
CHRD-209ENST00000461120 TRBV6-7A0A0A0MS04 114 aa11.17□□□□□ -0.62
CHRD-209ENST00000461120 MDFIC2A0A1B0GVS7 189 aa11.17□□□□□ -0.62
CHRD-209ENST00000461120 FABP12A6NFH5 140 aa11.17□□□□□ -0.62
CHRD-209ENST00000461120 BET1O15155 118 aa11.17□□□□□ -0.62
CHRD-209ENST00000461120 SLC31A2O15432 143 aa11.17□□□□□ -0.62
CHRD-209ENST00000461120 HSPA12AO43301 675 aa11.17□□□□□ -0.62
CHRD-209ENST00000461120 RGS11O94810 467 aa11.17□□□□□ -0.62
CHRD-209ENST00000461120 FCER2P06734 321 aa11.17□□□□□ -0.62
CHRD-209ENST00000461120 NAT1P18440 290 aa11.17□□□□□ -0.62
CHRD-209ENST00000461120 ZBTB25P24278 435 aa11.17□□□□□ -0.62
CHRD-209ENST00000461120 HTR1DP28221 377 aa11.17□□□□□ -0.62
CHRD-209ENST00000461120 ZNF134P52741 427 aa11.17□□□□□ -0.62
CHRD-209ENST00000461120 DEFB112Q30KQ8 113 aa11.17□□□□□ -0.62
CHRD-209ENST00000461120 RNASE12Q5GAN4 147 aaKnown RBP11.17□□□□□ -0.62
CHRD-209ENST00000461120 CT45A1Q5HYN5 189 aa11.17□□□□□ -0.62
CHRD-209ENST00000461120 MINOS1Q5TGZ0 78 aa11.17□□□□□ -0.62
CHRD-209ENST00000461120 OR52I2Q8NH67 350 aa11.17□□□□□ -0.62
CHRD-209ENST00000461120 CT45A3Q8NHU0 189 aa11.17□□□□□ -0.62
CHRD-209ENST00000461120 SNAPC3Q92966 411 aa11.17□□□□□ -0.62
CHRD-209ENST00000461120 ZNF48Q96MX3 618 aaPredicted RBP11.17□□□□□ -0.62
CHRD-209ENST00000461120 TOLLIPQ9H0E2 274 aa11.17□□□□□ -0.62
CHRD-209ENST00000461120 FAM96BQ9Y3D0 163 aa11.17□□□□□ -0.62
CHRD-209ENST00000461120 MINOS1-NBL1R4GNA1 71 aa11.17□□□□□ -0.62
CHRD-209ENST00000461120 BUB1B-PAK6H3BSN5 160 aa11.16□□□□□ -0.62
CHRD-209ENST00000461120 CTDSPLO15194 276 aa11.16□□□□□ -0.62
CHRD-209ENST00000461120 FBP1P09467 338 aa11.16□□□□□ -0.62
CHRD-209ENST00000461120 CTXN2P0C2S0 81 aa11.16□□□□□ -0.62
CHRD-209ENST00000461120 CEACAM6P40199 344 aa11.16□□□□□ -0.62
CHRD-209ENST00000461120 MRPS10P82664 201 aaKnown RBP11.16□□□□□ -0.62
CHRD-209ENST00000461120 DGCR2P98153 550 aa11.16□□□□□ -0.62
CHRD-209ENST00000461120 FAM131AQ6UXB0 335 aa11.16□□□□□ -0.62
CHRD-209ENST00000461120 SLC25A48Q6ZT89 311 aaKnown RBP11.16□□□□□ -0.62
CHRD-209ENST00000461120 DYNAPQ8N1N2 210 aa11.16□□□□□ -0.62
CHRD-209ENST00000461120 SIGLECL1Q8N7X8 197 aa11.16□□□□□ -0.62
CHRD-209ENST00000461120 OR10J5Q8NHC4 309 aa11.16□□□□□ -0.62
CHRD-209ENST00000461120 CREB3L1Q96BA8 519 aa11.16□□□□□ -0.62
CHRD-209ENST00000461120 MALSU1Q96EH3 234 aa11.16□□□□□ -0.62
CHRD-209ENST00000461120 PARP12Q9H0J9 701 aaKnown RBP11.16□□□□□ -0.62
CHRD-209ENST00000461120 PRDM13Q9H4Q3 707 aa11.16□□□□□ -0.62
CHRD-209ENST00000461120 DPM3Q9P2X0 92 aa11.16□□□□□ -0.62
CHRD-209ENST00000461120 AMMECR1Q9Y4X0 333 aaPredicted RBP11.16□□□□□ -0.62
CHRD-209ENST00000461120 V9GYH0 126 aa11.16□□□□□ -0.62
CHRD-209ENST00000461120 LEUTXA8MZ59 168 aa11.15□□□□□ -0.62
CHRD-209ENST00000461120 LY6LH3BQJ8 138 aa11.15□□□□□ -0.62
CHRD-209ENST00000461120 GABARAPH6UMI1 98 aa11.15□□□□□ -0.62
CHRD-209ENST00000461120 ITGB1BP1O14713 200 aa11.15□□□□□ -0.62
CHRD-209ENST00000461120 RCVRNP35243 200 aa11.15□□□□□ -0.62
CHRD-209ENST00000461120 ETV6P41212 452 aa11.15□□□□□ -0.62
CHRD-209ENST00000461120 ARPC4P59998 168 aa11.15□□□□□ -0.62
CHRD-209ENST00000461120 OR2AK2Q8NG84 335 aa11.15□□□□□ -0.62
CHRD-209ENST00000461120 OR10X1Q8NGY0 326 aa11.15□□□□□ -0.62
CHRD-209ENST00000461120 SMIM4Q8WVI0 70 aa11.15□□□□□ -0.62
CHRD-209ENST00000461120 FCAMRQ8WWV6 532 aa11.15□□□□□ -0.62
CHRD-209ENST00000461120 GINS4Q9BRT9 223 aa11.15□□□□□ -0.62
CHRD-209ENST00000461120 ABHD14AQ9BUJ0 271 aa11.15□□□□□ -0.62
CHRD-209ENST00000461120 C11orf54Q9H0W9 315 aaPredicted RBP11.15□□□□□ -0.62
CHRD-209ENST00000461120 OCEL1Q9H607 264 aa11.15□□□□□ -0.62
CHRD-209ENST00000461120 RDH8Q9NYR8 311 aa11.15□□□□□ -0.62
CHRD-209ENST00000461120 PTTG2Q9NZH5 202 aa11.15□□□□□ -0.62
CHRD-209ENST00000461120 MTFP1Q9UDX5 166 aa11.15□□□□□ -0.62
CHRD-209ENST00000461120 RBBP9O75884 186 aa11.14□□□□□ -0.63
CHRD-209ENST00000461120 PAX6P26367 422 aa11.14□□□□□ -0.63
CHRD-209ENST00000461120 PTBP1P26599 531 aaKnown RBP eCLIP11.14□□□□□ -0.63
CHRD-209ENST00000461120 CEACAM3P40198 252 aa11.14□□□□□ -0.63
CHRD-209ENST00000461120 SSX2Q16385 188 aa11.14□□□□□ -0.63
CHRD-209ENST00000461120 SPANXN2Q5MJ10 180 aa11.14□□□□□ -0.63
CHRD-209ENST00000461120 TPTE2P1Q5T6R2 138 aa11.14□□□□□ -0.63
CHRD-209ENST00000461120 LYSMD2Q8IV50 215 aa11.14□□□□□ -0.63
CHRD-209ENST00000461120 H1FOOQ8IZA3 346 aaPredicted RBP11.14□□□□□ -0.63
CHRD-209ENST00000461120 OR5AP2Q8NGF4 316 aa11.14□□□□□ -0.63
CHRD-209ENST00000461120 ZNF418Q8TF45 676 aaPredicted RBP11.14□□□□□ -0.63
CHRD-209ENST00000461120 EDARADDQ8WWZ3 215 aa11.14□□□□□ -0.63
CHRD-209ENST00000461120 ZDHHC16Q969W1 377 aa11.14□□□□□ -0.63
CHRD-209ENST00000461120 MEGF9Q9H1U4 602 aa11.14□□□□□ -0.63
CHRD-209ENST00000461120 IFI27L2Q9H2X8 130 aa11.14□□□□□ -0.63
CHRD-209ENST00000461120 NECAP2Q9NVZ3 263 aa11.14□□□□□ -0.63
CHRD-209ENST00000461120 KLK11Q9UBX7 282 aa11.14□□□□□ -0.63
CHRD-209ENST00000461120 HILPDAQ9Y5L2 63 aa11.14□□□□□ -0.63
CHRD-209ENST00000461120 ST8SIA5O15466 376 aa11.13□□□□□ -0.63
CHRD-209ENST00000461120 GSTZ1O43708 216 aaPredicted RBP11.13□□□□□ -0.63
CHRD-209ENST00000461120 IL3RAP26951 378 aa11.13□□□□□ -0.63
CHRD-209ENST00000461120 HLA-DMAP28067 261 aa11.13□□□□□ -0.63
CHRD-209ENST00000461120 RAB7AP51149 207 aa11.13□□□□□ -0.63
CHRD-209ENST00000461120 ZNF137PP52743 207 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms