RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 C16orf95Q9H693 158 aa16.53■□□□□ 0.24
RPUSD3-210ENST00000460909 RAB18Q9NP72 206 aa16.53■□□□□ 0.24
RPUSD3-210ENST00000460909 ZNF230Q9UIE0 474 aaPredicted RBP16.53■□□□□ 0.24
RPUSD3-210ENST00000460909 PITPNC1Q9UKF7 332 aa16.53■□□□□ 0.24
RPUSD3-210ENST00000460909 A0A0A6YYH2 397 aa16.52■□□□□ 0.24
RPUSD3-210ENST00000460909 TMEM235A6NFC5 223 aa16.52■□□□□ 0.24
RPUSD3-210ENST00000460909 A6NJ64 397 aa16.52■□□□□ 0.24
RPUSD3-210ENST00000460909 RGS11O94810 467 aa16.52■□□□□ 0.24
RPUSD3-210ENST00000460909 MNDAP41218 407 aa16.52■□□□□ 0.24
RPUSD3-210ENST00000460909 RPL5P46777 297 aaKnown RBP16.52■□□□□ 0.24
RPUSD3-210ENST00000460909 ARFRP1Q13795 201 aa16.52■□□□□ 0.24
RPUSD3-210ENST00000460909 SRSF7Q16629 238 aaKnown RBP eCLIP16.52■□□□□ 0.24
RPUSD3-210ENST00000460909 Q6ZS49 121 aa16.52■□□□□ 0.24
RPUSD3-210ENST00000460909 LINC01006Q8NI28 216 aa16.52■□□□□ 0.24
RPUSD3-210ENST00000460909 RTN4IP1Q8WWV3 396 aaPredicted RBP16.52■□□□□ 0.24
RPUSD3-210ENST00000460909 KCTD12Q96CX2 325 aaKnown RBP16.52■□□□□ 0.24
RPUSD3-210ENST00000460909 ABHD14AQ9BUJ0 271 aa16.52■□□□□ 0.24
RPUSD3-210ENST00000460909 OR1A1Q9P1Q5 309 aa16.52■□□□□ 0.24
RPUSD3-210ENST00000460909 IGHV1-3A0A0C4DH29 117 aa16.51■□□□□ 0.23
RPUSD3-210ENST00000460909 SSX5O60225 188 aa16.51■□□□□ 0.23
RPUSD3-210ENST00000460909 GAPDHP04406 335 aaKnown RBP16.51■□□□□ 0.23
RPUSD3-210ENST00000460909 REG1BP48304 166 aa16.51■□□□□ 0.23
RPUSD3-210ENST00000460909 THNSL2Q86YJ6 484 aa16.51■□□□□ 0.23
RPUSD3-210ENST00000460909 DRAM1Q8N682 238 aa16.51■□□□□ 0.23
RPUSD3-210ENST00000460909 MAFIPQ8WZ33 124 aa16.51■□□□□ 0.23
RPUSD3-210ENST00000460909 PARP12Q9H0J9 701 aaKnown RBP16.51■□□□□ 0.23
RPUSD3-210ENST00000460909 DCSTAMPQ9H295 470 aa16.51■□□□□ 0.23
RPUSD3-210ENST00000460909 TRAV18A0A075B6X5 111 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 IGKV1D-8A0A087WSZ0 117 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 A0A1B0GUS0 222 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 FABP7O15540 132 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 GSTT2P0CG29 244 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 GSTT2BP0CG30 244 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 DTYMKP23919 212 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 ZBTB25P24278 435 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 IL3RAP26951 378 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 PNLIPRP3Q17RR3 467 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 UBE2NLQ5JXB2 153 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 CLVS1Q8IUQ0 354 aaPredicted RBP16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 IZUMO1Q8IYV9 350 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 LYG1Q8N1E2 194 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 SAMD12Q8N8I0 201 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 OR2AK2Q8NG84 335 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 OR4A4PQ8NGN8 299 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 OR56B4Q8NH76 319 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 NUDCD2Q8WVJ2 157 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 AGMATQ9BSE5 352 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 CABLES2Q9BTV7 478 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 TOLLIPQ9H0E2 274 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 IFI27L2Q9H2X8 130 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 BEX1Q9HBH7 125 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 SLC23A1Q9UHI7 598 aa16.5■□□□□ 0.23
RPUSD3-210ENST00000460909 CLPSL1A2RUU4 121 aa16.49■□□□□ 0.23
RPUSD3-210ENST00000460909 ITGB1BP1O14713 200 aa16.49■□□□□ 0.23
RPUSD3-210ENST00000460909 TALDO1P37837 337 aa16.49■□□□□ 0.23
RPUSD3-210ENST00000460909 CEACAM6P40199 344 aa16.49■□□□□ 0.23
RPUSD3-210ENST00000460909 KIR2DS4P43632 304 aa16.49■□□□□ 0.23
RPUSD3-210ENST00000460909 RORCP51449 518 aa16.49■□□□□ 0.23
RPUSD3-210ENST00000460909 PITPNAQ00169 270 aa16.49■□□□□ 0.23
RPUSD3-210ENST00000460909 KIR2DS1Q14954 304 aa16.49■□□□□ 0.23
RPUSD3-210ENST00000460909 IGSF11Q5DX21 431 aa16.49■□□□□ 0.23
RPUSD3-210ENST00000460909 PHF21AQ96BD5 680 aa16.49■□□□□ 0.23
RPUSD3-210ENST00000460909 RANBP3Q9H6Z4 567 aaPredicted RBP16.49■□□□□ 0.23
RPUSD3-210ENST00000460909 DIABLOQ9NR28 239 aa16.49■□□□□ 0.23
RPUSD3-210ENST00000460909 XRCC3O43542 346 aa16.48■□□□□ 0.23
RPUSD3-210ENST00000460909 LANCL1O43813 399 aa16.48■□□□□ 0.23
RPUSD3-210ENST00000460909 DIRAS3O95661 229 aa16.48■□□□□ 0.23
RPUSD3-210ENST00000460909 SNRNP70P08621 437 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-210ENST00000460909 EBI3Q14213 229 aa16.48■□□□□ 0.23
RPUSD3-210ENST00000460909 SPCS2Q15005 226 aa16.48■□□□□ 0.23
RPUSD3-210ENST00000460909 CAPSLQ8WWF8 208 aa16.48■□□□□ 0.23
RPUSD3-210ENST00000460909 S100A16Q96FQ6 103 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-210ENST00000460909 RBM14Q96PK6 669 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-210ENST00000460909 NPFFR1Q9GZQ6 430 aa16.48■□□□□ 0.23
RPUSD3-210ENST00000460909 C11orf54Q9H0W9 315 aaPredicted RBP16.48■□□□□ 0.23
RPUSD3-210ENST00000460909 AUNIPQ9H7T9 357 aa16.48■□□□□ 0.23
RPUSD3-210ENST00000460909 TRBV6-7A0A0A0MS04 114 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 ST8SIA5O15466 376 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 HSPA12AO43301 675 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 TXNL1O43396 289 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 OR2F2O95006 317 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 FAM106CPP0CH98 169 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 OR3A3P47888 321 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 TMBIM6P55061 237 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 GNG2P59768 71 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 ZNF833PQ6ZTB9 187 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 C16orf82Q7Z2V1 217 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 MOB3BQ86TA1 216 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 TGIF2LXQ8IUE1 241 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 Q8N2B8 174 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 C3orf56Q8N813 242 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 RAB2BQ8WUD1 216 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 ACOT12Q8WYK0 555 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 BCL7BQ9BQE9 202 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 ZNF251Q9BRH9 671 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 SLC25A33Q9BSK2 321 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 ZNF747Q9BV97 191 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 ZNF702PQ9H963 129 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 COMMD3Q9UBI1 195 aa16.47■□□□□ 0.23
RPUSD3-210ENST00000460909 SCOCQ9UIL1 159 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms