RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 IMMP2LQ96T52 175 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 WDR61Q9GZS3 305 aaKnown RBP13.21□□□□□ -0.29
SSR4-206ENST00000460616 IGLV3-32A0A0A0MS00 114 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 HMGB3O15347 200 aaKnown RBP13.21□□□□□ -0.29
SSR4-206ENST00000460616 NUPR1O60356 82 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 LILRA1O75019 489 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 TUSC2O75896 110 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 SLC25A6P12236 298 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 CRYGSP22914 178 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 BRS3P32247 399 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 LCN2P80188 198 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 DAZAP2Q15038 168 aaPredicted RBP13.21□□□□□ -0.29
SSR4-206ENST00000460616 GUSBP11Q6P575 273 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 Q6ZRM9 215 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 NFAM1Q8NET5 270 aaPredicted RBP13.21□□□□□ -0.29
SSR4-206ENST00000460616 OR2M3Q8NG83 312 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 OR4C12Q96R67 309 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 MIEN1Q9BRT3 115 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 LPAR2Q9HBW0 351 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 TRBV11-1A0A0K0K1C0 115 aa13.2□□□□□ -0.3
SSR4-206ENST00000460616 CDX4O14627 284 aaPredicted RBP13.2□□□□□ -0.3
SSR4-206ENST00000460616 OR1D5P58170 312 aa13.2□□□□□ -0.3
SSR4-206ENST00000460616 HAPLN4Q86UW8 402 aa13.2□□□□□ -0.3
SSR4-206ENST00000460616 OR5T1Q8NG75 326 aa13.2□□□□□ -0.3
SSR4-206ENST00000460616 PIGCQ92535 297 aa13.2□□□□□ -0.3
SSR4-206ENST00000460616 RASL10BQ96S79 203 aa13.2□□□□□ -0.3
SSR4-206ENST00000460616 A0A0U1RQK1 487 aa13.2□□□□□ -0.3
SSR4-206ENST00000460616 A0A1B0GUS0 222 aa13.2□□□□□ -0.3
SSR4-206ENST00000460616 ZNF320A2RRD8 509 aa13.2□□□□□ -0.3
SSR4-206ENST00000460616 DLL1O00548 723 aa13.2□□□□□ -0.3
SSR4-206ENST00000460616 S100GP29377 79 aa13.2□□□□□ -0.3
SSR4-206ENST00000460616 ANKRD39Q53RE8 183 aa13.2□□□□□ -0.3
SSR4-206ENST00000460616 FAM27BQ5VT28 67 aa13.2□□□□□ -0.3
SSR4-206ENST00000460616 PLCXD3Q63HM9 321 aa13.2□□□□□ -0.3
SSR4-206ENST00000460616 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.2□□□□□ -0.3
SSR4-206ENST00000460616 CALHM1Q8IU99 346 aa13.2□□□□□ -0.3
SSR4-206ENST00000460616 TAF15Q92804 592 aaKnown RBP eCLIP13.2□□□□□ -0.3
SSR4-206ENST00000460616 ZNF837Q96EG3 531 aaPredicted RBP13.2□□□□□ -0.3
SSR4-206ENST00000460616 REPIN1Q9BWE0 567 aaKnown RBP13.2□□□□□ -0.3
SSR4-206ENST00000460616 PLA2G3Q9NZ20 509 aa13.2□□□□□ -0.3
SSR4-206ENST00000460616 IGHV3-15A0A0B4J1V0 119 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 IGKV1D-33P01593 117 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 IGKV1-33P01594 117 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 IL3RAP26951 378 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 GCH1P30793 250 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 CHRNA7P36544 502 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 RPL15P61313 204 aaKnown RBP13.19□□□□□ -0.3
SSR4-206ENST00000460616 SRSF7Q16629 238 aaKnown RBP eCLIP13.19□□□□□ -0.3
SSR4-206ENST00000460616 FAM78BQ5VT40 261 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 LRP11Q86VZ4 500 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 ARL6IP6Q8N6S5 226 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 OR51H1Q8NH63 302 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 DTD1Q8TEA8 209 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 C20orf144Q9BQM9 153 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 ULBP2Q9BZM5 246 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 CACNG5Q9UF02 275 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 ZFHX2Q9C0A1 2572 aaPredicted RBP13.19□□□□□ -0.3
SSR4-206ENST00000460616 DMXL1Q9Y485 3027 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 NPIPA2E9PIF3 369 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 NPIPA3F8WFD2 350 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 GDF9O60383 454 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 VENTXO95231 258 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 PSG2P11465 335 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 TDRG1Q3Y452 100 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 TOMM20LQ6UXN7 152 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 ANKRD37Q7Z713 158 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 ZNF611Q8N823 705 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 GATAD1Q8WUU5 269 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 PXMP4Q9Y6I8 212 aa13.19□□□□□ -0.3
SSR4-206ENST00000460616 PIGBOS1A0A0B4J2F0 54 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 SYNGR3O43761 229 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 TNFSF13O75888 250 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 NAPSAO96009 420 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 SELEP16581 610 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 CD33P20138 364 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 FKBP2P26885 142 aaKnown RBP13.18□□□□□ -0.3
SSR4-206ENST00000460616 PLA2G5P39877 138 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 CFHR1Q03591 330 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 BATFQ16520 125 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 RHBDD2Q6NTF9 364 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 PRR18Q8N4B5 295 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 OR1F12Q8NHA8 337 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 DUSP23Q9BVJ7 150 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 GPR35Q9HC97 309 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 TMEM106BQ9NUM4 274 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 RIF1Q5UIP0 2472 aaKnown RBP13.18□□□□□ -0.3
SSR4-206ENST00000460616 IGKV1-6A0A0C4DH72 117 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 KIR2DS1A0A191URI9 304 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 CD300LBA8K4G0 201 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 CTXN2P0C2S0 81 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 GLB1P16278 677 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 NBL1P41271 181 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 KIR2DS4P43632 304 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 KIR2DS1Q14954 304 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 SPANXN5Q5MJ07 72 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 WDYHV1Q96HA8 205 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 PARD6GQ9BYG4 376 aaPredicted RBP13.18□□□□□ -0.3
SSR4-206ENST00000460616 OR2J1Q9GZK6 312 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 MANBALQ9NQG1 85 aa13.18□□□□□ -0.3
SSR4-206ENST00000460616 UBE2L5PA0A1B0GUS4 154 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms