RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 ANK2Q01484 3957 aa10.34□□□□□ -0.75
COL18A1-206ENST00000459895 ATRQ13535 2644 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 DNHD1Q96M86 4753 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 BTBD17A6NE02 478 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 FAM25AB3EWG3 89 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 FAM25CB3EWG5 89 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 FAM25GB3EWG6 89 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 BET1O15155 118 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 CHST1O43916 411 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 GPR137BO60478 399 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 YPEL1O60688 119 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 FCER2P06734 321 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 GSTT2P0CG29 244 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 GSTT2BP0CG30 244 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 CEACAM3P40198 252 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 MNDAP41218 407 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 REG1BP48304 166 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 ZNF137PP52743 207 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 PITPNAQ00169 270 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 LY6EQ16553 131 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 KRTAP21-3Q3LHN1 58 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 Q6ZS49 121 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 ODF3L1Q8IXM7 274 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 GVQW1Q8N7I0 195 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 OR2AK2Q8NG84 335 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 PIFOQ8TCI5 191 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 SNAPC3Q92966 411 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 RPEQ96AT9 228 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 CMTM3Q96MX0 182 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 YPEL2Q96QA6 119 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 C19orf24Q9BVV8 132 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 DPAGT1Q9H3H5 408 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 EXTL2Q9UBQ6 330 aa10.33□□□□□ -0.76
COL18A1-206ENST00000459895 SAA2-SAA4A0A096LPE2 208 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 SMIM31A0A1B0GVY4 71 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 ZNF701M0R085 212 aaPredicted RBP10.32□□□□□ -0.76
COL18A1-206ENST00000459895 TIMM23O14925 209 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 RGS5O15539 181 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 HSPA12AO43301 675 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 RGS11O94810 467 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 SAA2P0DJI9 122 aaPredicted RBP10.32□□□□□ -0.76
COL18A1-206ENST00000459895 IL3RAP26951 378 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 RAB13P51153 203 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 ACTG1P63261 375 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 ZNF816Q0VGE8 651 aaPredicted RBP10.32□□□□□ -0.76
COL18A1-206ENST00000459895 AANATQ16613 207 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 SRSF7Q16629 238 aaKnown RBP eCLIP10.32□□□□□ -0.76
COL18A1-206ENST00000459895 RNASE12Q5GAN4 147 aaKnown RBP10.32□□□□□ -0.76
COL18A1-206ENST00000459895 CNIH2Q6PI25 160 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 TMEM219Q86XT9 240 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 SNX29P2Q8IUI4 249 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 LYG1Q8N1E2 194 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 OR56B4Q8NH76 319 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 OR5R1Q8NH85 324 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 ZFAND2BQ8WV99 257 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 CFHR4Q92496 578 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 ST6GALNAC6Q969X2 333 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 CREB3L1Q96BA8 519 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 OCSTAMPQ9BR26 566 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 ST6GALNAC5Q9BVH7 336 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 C6orf62Q9GZU0 229 aaPredicted RBP10.32□□□□□ -0.76
COL18A1-206ENST00000459895 ABCB10Q9NRK6 738 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 ANAPC10Q9UM13 185 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 TCF19Q9Y242 345 aa10.32□□□□□ -0.76
COL18A1-206ENST00000459895 TRBV6-7A0A0A0MS04 114 aa10.31□□□□□ -0.76
COL18A1-206ENST00000459895 DPPA5A6NC42 116 aa10.31□□□□□ -0.76
COL18A1-206ENST00000459895 RNF212BA8MTL3 300 aa10.31□□□□□ -0.76
COL18A1-206ENST00000459895 OOSP1A8MZH6 123 aa10.31□□□□□ -0.76
COL18A1-206ENST00000459895 CTDSP2O14595 271 aa10.31□□□□□ -0.76
COL18A1-206ENST00000459895 HLA-DQB1P01920 261 aa10.31□□□□□ -0.76
COL18A1-206ENST00000459895 ZBTB25P24278 435 aa10.31□□□□□ -0.76
COL18A1-206ENST00000459895 CD24P25063 80 aa10.31□□□□□ -0.76
COL18A1-206ENST00000459895 OR3A3P47888 321 aa10.31□□□□□ -0.76
COL18A1-206ENST00000459895 DYNLT3P51808 116 aa10.31□□□□□ -0.76
COL18A1-206ENST00000459895 LY6G6FQ5SQ64 297 aa10.31□□□□□ -0.76
COL18A1-206ENST00000459895 FAM216AQ8WUB2 273 aa10.31□□□□□ -0.76
COL18A1-206ENST00000459895 RTN4IP1Q8WWV3 396 aaPredicted RBP10.31□□□□□ -0.76
COL18A1-206ENST00000459895 MDFIQ99750 246 aa10.31□□□□□ -0.76
COL18A1-206ENST00000459895 NXF2Q9GZY0 626 aaKnown RBP10.31□□□□□ -0.76
COL18A1-206ENST00000459895 RDH8Q9NYR8 311 aa10.31□□□□□ -0.76
COL18A1-206ENST00000459895 ANXA10Q9UJ72 324 aa10.31□□□□□ -0.76
COL18A1-206ENST00000459895 IGHV1-3A0A0C4DH29 117 aa10.3□□□□□ -0.76
COL18A1-206ENST00000459895 A6NDX4 124 aa10.3□□□□□ -0.76
COL18A1-206ENST00000459895 FAM181BA6NEQ2 426 aa10.3□□□□□ -0.76
COL18A1-206ENST00000459895 DIRAS3O95661 229 aa10.3□□□□□ -0.76
COL18A1-206ENST00000459895 LPLP06858 475 aa10.3□□□□□ -0.76
COL18A1-206ENST00000459895 RAB7AP51149 207 aa10.3□□□□□ -0.76
COL18A1-206ENST00000459895 ARHGDIBP52566 201 aa10.3□□□□□ -0.76
COL18A1-206ENST00000459895 RELBQ01201 579 aa10.3□□□□□ -0.76
COL18A1-206ENST00000459895 RPL39P5Q59GN2 51 aa10.3□□□□□ -0.76
COL18A1-206ENST00000459895 DHRS7BQ6IAN0 325 aaPredicted RBP10.3□□□□□ -0.76
COL18A1-206ENST00000459895 CCDC144NLQ6NUI1 221 aa10.3□□□□□ -0.76
COL18A1-206ENST00000459895 CCBE1Q6UXH8 406 aaPredicted RBP10.3□□□□□ -0.76
COL18A1-206ENST00000459895 ZNF833PQ6ZTB9 187 aa10.3□□□□□ -0.76
COL18A1-206ENST00000459895 HOGA1Q86XE5 327 aa10.3□□□□□ -0.76
COL18A1-206ENST00000459895 H1FOOQ8IZA3 346 aaPredicted RBP10.3□□□□□ -0.76
COL18A1-206ENST00000459895 OR8H3Q8N146 312 aa10.3□□□□□ -0.76
COL18A1-206ENST00000459895 DRAM1Q8N682 238 aa10.3□□□□□ -0.76
COL18A1-206ENST00000459895 BEST4Q8NFU0 473 aa10.3□□□□□ -0.76
COL18A1-206ENST00000459895 OR10J5Q8NHC4 309 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms