RNA–Protein interactions for RNA: ENST00000457264.5

MRPL55-222, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-222ENST00000457264 ZNF554Q86TJ5 538 aa12.9□□□□□ -0.34
MRPL55-222ENST00000457264 GHSRQ92847 366 aa12.9□□□□□ -0.34
MRPL55-222ENST00000457264 FLYWCH2Q96CP2 140 aaKnown RBP12.9□□□□□ -0.34
MRPL55-222ENST00000457264 SMIM19Q96E16 107 aa12.9□□□□□ -0.34
MRPL55-222ENST00000457264 SELENOIQ9C0D9 397 aa12.9□□□□□ -0.34
MRPL55-222ENST00000457264 BANF2Q9H503 90 aa12.9□□□□□ -0.34
MRPL55-222ENST00000457264 FGF20Q9NP95 211 aaPredicted RBP12.9□□□□□ -0.34
MRPL55-222ENST00000457264 BABAM2Q9NXR7 383 aa12.9□□□□□ -0.34
MRPL55-222ENST00000457264 IGHV4OR15-8A0A075B7B6 117 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 A0A087WW49 117 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 LOC100130705A0A1B0GUX0 176 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 UBE2QL1A1L167 161 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 FAM90A7PA6NKC0 464 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 FAM90A23PA8MXZ1 464 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 OGG1O15527 345 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 YPEL1O60688 119 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 GPX5O75715 221 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 SC5DO75845 299 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 NDUFA3O95167 84 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 DCKP27707 260 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 OR3A3P47888 321 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 PLGLAQ15195 96 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 AWAT2Q6E213 333 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 ODF3L1Q8IXM7 274 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 TCTEX1D1Q8N7M0 179 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 OR13C5Q8NGS8 318 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 CASTOR1Q8WTX7 329 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 GALMQ96C23 342 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 ISOC1Q96CN7 298 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 YPEL2Q96QA6 119 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 TM2D3Q9BRN9 247 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 TPSG1Q9NRR2 321 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 MBNL3Q9NUK0 354 aaKnown RBP12.89□□□□□ -0.35
MRPL55-222ENST00000457264 A3GALT2U3KPV4 340 aa12.89□□□□□ -0.35
MRPL55-222ENST00000457264 TRAV8-7A0A075B6U6 113 aa12.88□□□□□ -0.35
MRPL55-222ENST00000457264 TRBV5-5A0A0J9YX44 114 aa12.88□□□□□ -0.35
MRPL55-222ENST00000457264 SOX15O60248 233 aa12.88□□□□□ -0.35
MRPL55-222ENST00000457264 CRTAPO75718 401 aaPredicted RBP12.88□□□□□ -0.35
MRPL55-222ENST00000457264 MAS1P04201 325 aa12.88□□□□□ -0.35
MRPL55-222ENST00000457264 HSPB1P04792 205 aaKnown RBP12.88□□□□□ -0.35
MRPL55-222ENST00000457264 MGMTP16455 207 aa12.88□□□□□ -0.35
MRPL55-222ENST00000457264 CD40LGP29965 261 aa12.88□□□□□ -0.35
MRPL55-222ENST00000457264 CX3CL1P78423 397 aa12.88□□□□□ -0.35
MRPL55-222ENST00000457264 HTD2P86397 168 aa12.88□□□□□ -0.35
MRPL55-222ENST00000457264 Q499Y3 187 aa12.88□□□□□ -0.35
MRPL55-222ENST00000457264 PYHIN1Q6K0P9 492 aa12.88□□□□□ -0.35
MRPL55-222ENST00000457264 ZNF833PQ6ZTB9 187 aa12.88□□□□□ -0.35
MRPL55-222ENST00000457264 OR2AK2Q8NG84 335 aa12.88□□□□□ -0.35
MRPL55-222ENST00000457264 ABHD5Q8WTS1 349 aa12.88□□□□□ -0.35
MRPL55-222ENST00000457264 ELOVL1Q9BW60 279 aa12.88□□□□□ -0.35
MRPL55-222ENST00000457264 RNF150Q9ULK6 438 aa12.88□□□□□ -0.35
MRPL55-222ENST00000457264 FBXO7Q9Y3I1 522 aa12.88□□□□□ -0.35
MRPL55-222ENST00000457264 LRRC42Q9Y546 428 aa12.88□□□□□ -0.35
MRPL55-222ENST00000457264 SORL1Q92673 2214 aa12.88□□□□□ -0.35
MRPL55-222ENST00000457264 SAA2-SAA4A0A096LPE2 208 aa12.87□□□□□ -0.35
MRPL55-222ENST00000457264 H3BNX3 289 aa12.87□□□□□ -0.35
MRPL55-222ENST00000457264 ARPC1BO15143 372 aaKnown RBP12.87□□□□□ -0.35
MRPL55-222ENST00000457264 IGHV3-11P01762 117 aa12.87□□□□□ -0.35
MRPL55-222ENST00000457264 SAA2P0DJI9 122 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-222ENST00000457264 IGHV4-30-4P0DP06 118 aa12.87□□□□□ -0.35
MRPL55-222ENST00000457264 MYL12AP19105 171 aa12.87□□□□□ -0.35
MRPL55-222ENST00000457264 CRIP2P52943 208 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-222ENST00000457264 NDPQ00604 133 aa12.87□□□□□ -0.35
MRPL55-222ENST00000457264 YIF1BQ5BJH7 314 aa12.87□□□□□ -0.35
MRPL55-222ENST00000457264 C19orf54Q5BKX5 351 aa12.87□□□□□ -0.35
MRPL55-222ENST00000457264 LY6G6FQ5SQ64 297 aa12.87□□□□□ -0.35
MRPL55-222ENST00000457264 ZFP1Q6P2D0 407 aa12.87□□□□□ -0.35
MRPL55-222ENST00000457264 C5orf24Q7Z6I8 188 aa12.87□□□□□ -0.35
MRPL55-222ENST00000457264 SGPP2Q8IWX5 399 aa12.87□□□□□ -0.35
MRPL55-222ENST00000457264 APH1BQ8WW43 257 aa12.87□□□□□ -0.35
MRPL55-222ENST00000457264 RDH12Q96NR8 316 aa12.87□□□□□ -0.35
MRPL55-222ENST00000457264 C9orf16Q9BUW7 83 aa12.87□□□□□ -0.35
MRPL55-222ENST00000457264 FBXL15Q9H469 300 aa12.87□□□□□ -0.35
MRPL55-222ENST00000457264 NUBP2Q9Y5Y2 271 aa12.87□□□□□ -0.35
MRPL55-222ENST00000457264 RRHO14718 337 aa12.86□□□□□ -0.35
MRPL55-222ENST00000457264 FSTP19883 344 aa12.86□□□□□ -0.35
MRPL55-222ENST00000457264 SMN1Q16637 294 aaKnown RBP12.86□□□□□ -0.35
MRPL55-222ENST00000457264 LRRC36Q1X8D7 754 aa12.86□□□□□ -0.35
MRPL55-222ENST00000457264 ACTBL2Q562R1 376 aa12.86□□□□□ -0.35
MRPL55-222ENST00000457264 DMKNQ6E0U4 476 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-222ENST00000457264 FAM131AQ6UXB0 335 aa12.86□□□□□ -0.35
MRPL55-222ENST00000457264 LYPD6Q86Y78 171 aa12.86□□□□□ -0.35
MRPL55-222ENST00000457264 ANKRD13BQ86YJ7 626 aa12.86□□□□□ -0.35
MRPL55-222ENST00000457264 CDH26Q8IXH8 852 aa12.86□□□□□ -0.35
MRPL55-222ENST00000457264 MRPL30Q8TCC3 161 aaKnown RBP12.86□□□□□ -0.35
MRPL55-222ENST00000457264 Q96M66 194 aa12.86□□□□□ -0.35
MRPL55-222ENST00000457264 MS4A10Q96PG2 267 aa12.86□□□□□ -0.35
MRPL55-222ENST00000457264 RSRP1Q9BUV0 290 aa12.86□□□□□ -0.35
MRPL55-222ENST00000457264 ABRACLQ9P1F3 81 aa12.86□□□□□ -0.35
MRPL55-222ENST00000457264 STEAP1Q9UHE8 339 aa12.86□□□□□ -0.35
MRPL55-222ENST00000457264 STUB1Q9UNE7 303 aa12.86□□□□□ -0.35
MRPL55-222ENST00000457264 HUWE1Q7Z6Z7 4374 aaKnown RBP12.85□□□□□ -0.35
MRPL55-222ENST00000457264 A0A1W2PPK0 400 aa12.85□□□□□ -0.35
MRPL55-222ENST00000457264 IRGMA1A4Y4 181 aa12.85□□□□□ -0.35
MRPL55-222ENST00000457264 FCN1O00602 326 aa12.85□□□□□ -0.35
MRPL55-222ENST00000457264 RAB29O14966 203 aa12.85□□□□□ -0.35
MRPL55-222ENST00000457264 HSPA12AO43301 675 aa12.85□□□□□ -0.35
MRPL55-222ENST00000457264 PDCD6O75340 191 aa12.85□□□□□ -0.35
MRPL55-222ENST00000457264 GSTP1P09211 210 aaKnown RBP12.85□□□□□ -0.35
MRPL55-222ENST00000457264 EGR2P11161 476 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms