RNA–Protein interactions for RNA: ENST00000456517.2

HIPK3-203, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HIPK3, Length 7,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-203ENST00000456517 IGHV4-34P06331 123 aa12.64□□□□□ -0.39
HIPK3-203ENST00000456517 RNASE1P07998 156 aaKnown RBP12.64□□□□□ -0.39
HIPK3-203ENST00000456517 ZAR1Q86SH2 424 aa12.64□□□□□ -0.39
HIPK3-203ENST00000456517 ZNF501Q96CX3 271 aaPredicted RBP12.64□□□□□ -0.39
HIPK3-203ENST00000456517 MARS2Q96GW9 593 aaKnown RBP12.64□□□□□ -0.39
HIPK3-203ENST00000456517 WDFY2Q96P53 400 aa12.64□□□□□ -0.39
HIPK3-203ENST00000456517 CELA2AP08217 269 aa12.64□□□□□ -0.39
HIPK3-203ENST00000456517 USP54Q70EL1 1684 aa12.64□□□□□ -0.39
HIPK3-203ENST00000456517 IGHV1-45A0A0A0MS14 117 aa12.63□□□□□ -0.39
HIPK3-203ENST00000456517 INPP5JQ15735 1006 aaPredicted RBP12.63□□□□□ -0.39
HIPK3-203ENST00000456517 FAM53AQ6NSI3 398 aaPredicted RBP12.63□□□□□ -0.39
HIPK3-203ENST00000456517 RCC2Q9P258 522 aaKnown RBP12.63□□□□□ -0.39
HIPK3-203ENST00000456517 hCG_38984A0A1B0GV85 526 aa12.63□□□□□ -0.39
HIPK3-203ENST00000456517 LEUTXA8MZ59 168 aa12.63□□□□□ -0.39
HIPK3-203ENST00000456517 HPRT1P00492 218 aa12.63□□□□□ -0.39
HIPK3-203ENST00000456517 NAT2P11245 290 aa12.63□□□□□ -0.39
HIPK3-203ENST00000456517 COL13A1Q5TAT6 717 aaPredicted RBP12.63□□□□□ -0.39
HIPK3-203ENST00000456517 SEZ6L2Q6UXD5 910 aa12.63□□□□□ -0.39
HIPK3-203ENST00000456517 RNF133Q8WVZ7 376 aa12.63□□□□□ -0.39
HIPK3-203ENST00000456517 SNRPCP09234 159 aaKnown RBP12.63□□□□□ -0.39
HIPK3-203ENST00000456517 PDLIM4P50479 330 aa12.63□□□□□ -0.39
HIPK3-203ENST00000456517 RPL24P83731 157 aaKnown RBP12.63□□□□□ -0.39
HIPK3-203ENST00000456517 LYZL2Q7Z4W2 148 aa12.63□□□□□ -0.39
HIPK3-203ENST00000456517 APCSP02743 223 aa12.63□□□□□ -0.39
HIPK3-203ENST00000456517 TMEM50BP56557 158 aa12.63□□□□□ -0.39
HIPK3-203ENST00000456517 SCNM1Q9BWG6 230 aa12.63□□□□□ -0.39
HIPK3-203ENST00000456517 ZDBF2Q9HCK1 2354 aa12.63□□□□□ -0.39
HIPK3-203ENST00000456517 BTF3P20290 206 aaKnown RBP12.63□□□□□ -0.39
HIPK3-203ENST00000456517 HCP5Q6MZN7 132 aa12.63□□□□□ -0.39
HIPK3-203ENST00000456517 AHCTF1Q8WYP5 2266 aa12.63□□□□□ -0.39
HIPK3-203ENST00000456517 MRPL24Q96A35 216 aaKnown RBP12.63□□□□□ -0.39
HIPK3-203ENST00000456517 TBX15Q96SF7 602 aa12.63□□□□□ -0.39
HIPK3-203ENST00000456517 TUBA4BQ9H853 241 aa12.63□□□□□ -0.39
HIPK3-203ENST00000456517 SCN7AQ01118 1682 aa12.62□□□□□ -0.39
HIPK3-203ENST00000456517 CASP8AP2Q9UKL3 1982 aa12.62□□□□□ -0.39
HIPK3-203ENST00000456517 IFNL4K9M1U5 179 aa12.62□□□□□ -0.39
HIPK3-203ENST00000456517 TGIF1Q15583 401 aa12.62□□□□□ -0.39
HIPK3-203ENST00000456517 ZNF880Q6PDB4 577 aa12.62□□□□□ -0.39
HIPK3-203ENST00000456517 DUX5Q96PT3 197 aa12.62□□□□□ -0.39
HIPK3-203ENST00000456517 DOPEY2Q9Y3R5 2298 aa12.62□□□□□ -0.39
HIPK3-203ENST00000456517 HERPUD1Q15011 391 aa12.62□□□□□ -0.39
HIPK3-203ENST00000456517 TMEM189A5PLL7 270 aa12.62□□□□□ -0.39
HIPK3-203ENST00000456517 FOXS1O43638 330 aa12.62□□□□□ -0.39
HIPK3-203ENST00000456517 NDUFA2O43678 99 aa12.62□□□□□ -0.39
HIPK3-203ENST00000456517 RBM11P57052 281 aaKnown RBP12.62□□□□□ -0.39
HIPK3-203ENST00000456517 EWSR1Q01844 656 aaKnown RBP eCLIP12.62□□□□□ -0.39
HIPK3-203ENST00000456517 A0A1W2PPV9 198 aa12.62□□□□□ -0.39
HIPK3-203ENST00000456517 A1L4Q6 167 aa12.62□□□□□ -0.39
HIPK3-203ENST00000456517 HBZP02008 142 aa12.62□□□□□ -0.39
HIPK3-203ENST00000456517 HIST1H1BP16401 226 aaKnown RBP12.62□□□□□ -0.39
HIPK3-203ENST00000456517 GPA33Q99795 319 aa12.62□□□□□ -0.39
HIPK3-203ENST00000456517 MIOXQ9UGB7 285 aa12.62□□□□□ -0.39
HIPK3-203ENST00000456517 GLI3P10071 1580 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 IER3P46695 156 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 PSG4Q00888 419 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 OVCH2Q7RTZ1 564 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 ABHD14BQ96IU4 210 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 SP9P0CG40 484 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 MPV17P39210 176 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 ARF6P62330 175 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 CEACAM21Q3KPI0 293 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 MS4A3Q96HJ5 214 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 PRO1933Q9H354 126 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 ARHGEF17Q96PE2 2063 aaPredicted RBP12.61□□□□□ -0.39
HIPK3-203ENST00000456517 SNURFLB1AK76 121 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 PRSS8Q16651 343 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 NPVFQ9HCQ7 196 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 HMSDA8MTL9 139 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 RAB9AP51151 201 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 FAM74A3Q4VXF1 159 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 ADAT3Q96EY9 351 aaPredicted RBP12.61□□□□□ -0.39
HIPK3-203ENST00000456517 IL17BQ9UHF5 180 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 CDS2O95674 445 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 FAM27BQ5VT28 67 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 GCSAMQ8N6F7 178 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 WNT2BQ93097 391 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 HDHD3Q9BSH5 251 aaPredicted RBP12.61□□□□□ -0.39
HIPK3-203ENST00000456517 ANGPTL4Q9BY76 406 aa12.61□□□□□ -0.39
HIPK3-203ENST00000456517 PPIAL4CA0A0B4J2A2 164 aa12.6□□□□□ -0.39
HIPK3-203ENST00000456517 MPDU1O75352 247 aa12.6□□□□□ -0.39
HIPK3-203ENST00000456517 PPIAL4GP0DN37 164 aa12.6□□□□□ -0.39
HIPK3-203ENST00000456517 PCSK4Q6UW60 755 aa12.6□□□□□ -0.39
HIPK3-203ENST00000456517 MRGPRGQ86SM5 289 aa12.6□□□□□ -0.39
HIPK3-203ENST00000456517 SCMH1Q96GD3 660 aa12.6□□□□□ -0.39
HIPK3-203ENST00000456517 TNRC6CQ9HCJ0 1690 aaKnown RBP12.6□□□□□ -0.39
HIPK3-203ENST00000456517 STRCQ7RTU9 1775 aa12.6□□□□□ -0.39
HIPK3-203ENST00000456517 SNRPEP62304 92 aaKnown RBP12.6□□□□□ -0.39
HIPK3-203ENST00000456517 COTL1Q14019 142 aa12.6□□□□□ -0.39
HIPK3-203ENST00000456517 OR4D11Q8NGI4 311 aa12.6□□□□□ -0.39
HIPK3-203ENST00000456517 LOC105371242A0A075B767 164 aa12.6□□□□□ -0.39
HIPK3-203ENST00000456517 OR4C45A6NMZ5 311 aa12.6□□□□□ -0.39
HIPK3-203ENST00000456517 CRHP06850 196 aa12.6□□□□□ -0.39
HIPK3-203ENST00000456517 TMEM204Q9BSN7 226 aa12.6□□□□□ -0.39
HIPK3-203ENST00000456517 PHLDA3Q9Y5J5 127 aa12.6□□□□□ -0.39
HIPK3-203ENST00000456517 FAM216AQ8WUB2 273 aa12.6□□□□□ -0.39
HIPK3-203ENST00000456517 SIRT7Q9NRC8 400 aa12.6□□□□□ -0.39
HIPK3-203ENST00000456517 IL19Q9UHD0 177 aa12.6□□□□□ -0.39
HIPK3-203ENST00000456517 KLRB1Q12918 225 aa12.6□□□□□ -0.39
HIPK3-203ENST00000456517 XAF1Q6GPH4 301 aa12.6□□□□□ -0.39
HIPK3-203ENST00000456517 SNX22Q96L94 193 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms