RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 LOC100506127A0A0U1RQW1 187 aa13.83□□□□□ -0.2
USP39-208ENST00000455732 SMIM30A4D0T7 59 aa13.83□□□□□ -0.2
USP39-208ENST00000455732 METTL21EPA6NDL7 271 aa13.83□□□□□ -0.2
USP39-208ENST00000455732 MFNGO00587 321 aa13.83□□□□□ -0.2
USP39-208ENST00000455732 AMY1AP04745 511 aa13.83□□□□□ -0.2
USP39-208ENST00000455732 AMY2AP04746 511 aa13.83□□□□□ -0.2
USP39-208ENST00000455732 LPLP06858 475 aa13.83□□□□□ -0.2
USP39-208ENST00000455732 SCAND1P57086 179 aa13.83□□□□□ -0.2
USP39-208ENST00000455732 HLA-DRB3P79483 266 aa13.83□□□□□ -0.2
USP39-208ENST00000455732 MOGAT2Q3SYC2 334 aa13.83□□□□□ -0.2
USP39-208ENST00000455732 C5orf24Q7Z6I8 188 aa13.83□□□□□ -0.2
USP39-208ENST00000455732 KLHDC1Q8N7A1 406 aa13.83□□□□□ -0.2
USP39-208ENST00000455732 CENPOQ9BU64 300 aa13.83□□□□□ -0.2
USP39-208ENST00000455732 Q9N2K0 584 aa13.83□□□□□ -0.2
USP39-208ENST00000455732 MOB4Q9Y3A3 225 aa13.83□□□□□ -0.2
USP39-208ENST00000455732 LANCL1O43813 399 aa13.82□□□□□ -0.2
USP39-208ENST00000455732 HIST1H1DP16402 221 aaKnown RBP13.82□□□□□ -0.2
USP39-208ENST00000455732 REG1BP48304 166 aa13.82□□□□□ -0.2
USP39-208ENST00000455732 HERPUD1Q15011 391 aa13.82□□□□□ -0.2
USP39-208ENST00000455732 Q6ZS46 218 aa13.82□□□□□ -0.2
USP39-208ENST00000455732 TGIF2LXQ8IUE1 241 aa13.82□□□□□ -0.2
USP39-208ENST00000455732 SETD6Q8TBK2 473 aa13.82□□□□□ -0.2
USP39-208ENST00000455732 WIPF2Q8TF74 440 aaPredicted RBP13.82□□□□□ -0.2
USP39-208ENST00000455732 YIPF6Q96EC8 236 aa13.82□□□□□ -0.2
USP39-208ENST00000455732 WNT10AQ9GZT5 417 aa13.82□□□□□ -0.2
USP39-208ENST00000455732 MMP27Q9H306 513 aa13.82□□□□□ -0.2
USP39-208ENST00000455732 RNF167Q9H6Y7 350 aa13.82□□□□□ -0.2
USP39-208ENST00000455732 DAPK2Q9UIK4 370 aa13.82□□□□□ -0.2
USP39-208ENST00000455732 SERPINE3A8MV23 424 aa13.81□□□□□ -0.2
USP39-208ENST00000455732 ITGB1BP1O14713 200 aa13.81□□□□□ -0.2
USP39-208ENST00000455732 FGF16O43320 207 aa13.81□□□□□ -0.2
USP39-208ENST00000455732 TMEM127O75204 238 aa13.81□□□□□ -0.2
USP39-208ENST00000455732 IGKV1D-33P01593 117 aa13.81□□□□□ -0.2
USP39-208ENST00000455732 IGKV1-33P01594 117 aa13.81□□□□□ -0.2
USP39-208ENST00000455732 TMEM11P17152 192 aa13.81□□□□□ -0.2
USP39-208ENST00000455732 CD1BP29016 333 aa13.81□□□□□ -0.2
USP39-208ENST00000455732 ARL6IP1Q15041 203 aa13.81□□□□□ -0.2
USP39-208ENST00000455732 MOB3BQ86TA1 216 aa13.81□□□□□ -0.2
USP39-208ENST00000455732 ODF3L1Q8IXM7 274 aa13.81□□□□□ -0.2
USP39-208ENST00000455732 LYG1Q8N1E2 194 aa13.81□□□□□ -0.2
USP39-208ENST00000455732 OR2AK2Q8NG84 335 aa13.81□□□□□ -0.2
USP39-208ENST00000455732 IL1F10Q8WWZ1 152 aa13.81□□□□□ -0.2
USP39-208ENST00000455732 IFI27L2Q9H2X8 130 aa13.81□□□□□ -0.2
USP39-208ENST00000455732 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.81□□□□□ -0.2
USP39-208ENST00000455732 SCGNO76038 276 aa13.8□□□□□ -0.2
USP39-208ENST00000455732 TSPAN15O95858 294 aa13.8□□□□□ -0.2
USP39-208ENST00000455732 CD3GP09693 182 aa13.8□□□□□ -0.2
USP39-208ENST00000455732 GNB3P16520 340 aa13.8□□□□□ -0.2
USP39-208ENST00000455732 VDAC2P45880 294 aaPredicted RBP13.8□□□□□ -0.2
USP39-208ENST00000455732 MRPS15P82914 257 aaKnown RBP13.8□□□□□ -0.2
USP39-208ENST00000455732 HES1Q14469 280 aa13.8□□□□□ -0.2
USP39-208ENST00000455732 ABCA11PQ4W5N1 156 aa13.8□□□□□ -0.2
USP39-208ENST00000455732 FAM71F2Q6NXP2 309 aa13.8□□□□□ -0.2
USP39-208ENST00000455732 Q8N6K4 173 aa13.8□□□□□ -0.2
USP39-208ENST00000455732 LGALS14Q8TCE9 139 aa13.8□□□□□ -0.2
USP39-208ENST00000455732 AIREO43918 545 aa13.79□□□□□ -0.2
USP39-208ENST00000455732 DIRAS3O95661 229 aa13.79□□□□□ -0.2
USP39-208ENST00000455732 FCGR3AP08637 254 aa13.79□□□□□ -0.2
USP39-208ENST00000455732 CLEC2LP0C7M8 214 aa13.79□□□□□ -0.2
USP39-208ENST00000455732 VSIG10L2P0DP72 767 aa13.79□□□□□ -0.2
USP39-208ENST00000455732 SNRPBP14678 240 aaKnown RBP13.79□□□□□ -0.2
USP39-208ENST00000455732 MXD1Q05195 221 aa13.79□□□□□ -0.2
USP39-208ENST00000455732 C2orf68Q2NKX9 166 aa13.79□□□□□ -0.2
USP39-208ENST00000455732 ZNF833PQ6ZTB9 187 aa13.79□□□□□ -0.2
USP39-208ENST00000455732 C5orf56Q8N8D9 126 aa13.79□□□□□ -0.2
USP39-208ENST00000455732 OR2T10Q8NGZ9 312 aa13.79□□□□□ -0.2
USP39-208ENST00000455732 EAF1Q96JC9 268 aaPredicted RBP13.79□□□□□ -0.2
USP39-208ENST00000455732 ATG5Q9H1Y0 275 aa13.79□□□□□ -0.2
USP39-208ENST00000455732 ETV7Q9Y603 341 aa13.79□□□□□ -0.2
USP39-208ENST00000455732 PLXNB1O43157 2135 aa13.79□□□□□ -0.2
USP39-208ENST00000455732 SAA2-SAA4A0A096LPE2 208 aa13.78□□□□□ -0.2
USP39-208ENST00000455732 IGHV3-72A0A0B4J1Y9 119 aa13.78□□□□□ -0.2
USP39-208ENST00000455732 TRDCB7Z8K6 153 aa13.78□□□□□ -0.2
USP39-208ENST00000455732 SCTP09683 121 aa13.78□□□□□ -0.2
USP39-208ENST00000455732 SAA2P0DJI9 122 aaPredicted RBP13.78□□□□□ -0.2
USP39-208ENST00000455732 ZBTB25P24278 435 aa13.78□□□□□ -0.2
USP39-208ENST00000455732 DEFA6Q01524 100 aa13.78□□□□□ -0.2
USP39-208ENST00000455732 LSAMPQ13449 338 aa13.78□□□□□ -0.2
USP39-208ENST00000455732 KIR2DS1Q14954 304 aa13.78□□□□□ -0.2
USP39-208ENST00000455732 SRSF7Q16629 238 aaKnown RBP eCLIP13.78□□□□□ -0.2
USP39-208ENST00000455732 TMEM95Q3KNT9 176 aa13.78□□□□□ -0.2
USP39-208ENST00000455732 PDLIM3Q53GG5 364 aaPredicted RBP13.78□□□□□ -0.2
USP39-208ENST00000455732 ARSJQ5FYB0 599 aaPredicted RBP13.78□□□□□ -0.2
USP39-208ENST00000455732 HIST2H2BDQ6DRA6 164 aa13.78□□□□□ -0.2
USP39-208ENST00000455732 Q6ZS49 121 aa13.78□□□□□ -0.2
USP39-208ENST00000455732 C11orf44Q8N8P7 122 aa13.78□□□□□ -0.2
USP39-208ENST00000455732 OR8H1Q8NGG4 311 aa13.78□□□□□ -0.2
USP39-208ENST00000455732 OR4A4PQ8NGN8 299 aa13.78□□□□□ -0.2
USP39-208ENST00000455732 EDARADDQ8WWZ3 215 aa13.78□□□□□ -0.2
USP39-208ENST00000455732 GHITMQ9H3K2 345 aa13.78□□□□□ -0.2
USP39-208ENST00000455732 PIPOXQ9P0Z9 390 aa13.78□□□□□ -0.2
USP39-208ENST00000455732 OR1A1Q9P1Q5 309 aa13.78□□□□□ -0.2
USP39-208ENST00000455732 SLC23A1Q9UHI7 598 aa13.78□□□□□ -0.2
USP39-208ENST00000455732 IGKV1-6A0A0C4DH72 117 aa13.77□□□□□ -0.21
USP39-208ENST00000455732 PEX14O75381 377 aa13.77□□□□□ -0.21
USP39-208ENST00000455732 MOSP00540 346 aa13.77□□□□□ -0.21
USP39-208ENST00000455732 SERPINB10P48595 397 aa13.77□□□□□ -0.21
USP39-208ENST00000455732 HNF4GQ14541 408 aa13.77□□□□□ -0.21
USP39-208ENST00000455732 CROCCP3Q8IVE0 287 aa13.77□□□□□ -0.21
USP39-208ENST00000455732 AGMATQ9BSE5 352 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms