RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 ICAM4Q14773 271 aa8.3□□□□□ -1.08
LINC01940-201ENST00000455228 BATFQ16520 125 aa8.3□□□□□ -1.08
LINC01940-201ENST00000455228 SRSF7Q16629 238 aaKnown RBP eCLIP8.3□□□□□ -1.08
LINC01940-201ENST00000455228 WDR74Q6RFH5 385 aaPredicted RBP8.3□□□□□ -1.08
LINC01940-201ENST00000455228 TMEM182Q6ZP80 229 aaPredicted RBP8.3□□□□□ -1.08
LINC01940-201ENST00000455228 POC1AQ8NBT0 407 aa8.3□□□□□ -1.08
LINC01940-201ENST00000455228 OR51G1Q8NGK1 321 aa8.3□□□□□ -1.08
LINC01940-201ENST00000455228 TMEM45BQ96B21 275 aa8.3□□□□□ -1.08
LINC01940-201ENST00000455228 RTBDNQ9BSG5 229 aaPredicted RBP8.3□□□□□ -1.08
LINC01940-201ENST00000455228 OR10A2Q9H208 303 aa8.3□□□□□ -1.08
LINC01940-201ENST00000455228 C1orf123Q9NWV4 160 aa8.3□□□□□ -1.08
LINC01940-201ENST00000455228 FBXL17Q9UF56 701 aa8.3□□□□□ -1.08
LINC01940-201ENST00000455228 VDAC3Q9Y277 283 aa8.3□□□□□ -1.08
LINC01940-201ENST00000455228 hCG_38984A0A1B0GV85 526 aa8.29□□□□□ -1.08
LINC01940-201ENST00000455228 SIVA1O15304 175 aa8.29□□□□□ -1.08
LINC01940-201ENST00000455228 DUSP1P28562 367 aa8.29□□□□□ -1.08
LINC01940-201ENST00000455228 MLF1P58340 268 aa8.29□□□□□ -1.08
LINC01940-201ENST00000455228 AESQ08117 197 aa8.29□□□□□ -1.08
LINC01940-201ENST00000455228 SRSF6Q13247 344 aaKnown RBP8.29□□□□□ -1.08
LINC01940-201ENST00000455228 CD300EQ496F6 205 aaPredicted RBP8.29□□□□□ -1.08
LINC01940-201ENST00000455228 KIAA0895LQ68EN5 471 aa8.29□□□□□ -1.08
LINC01940-201ENST00000455228 RNF144BQ7Z419 303 aa8.29□□□□□ -1.08
LINC01940-201ENST00000455228 OR13G1Q8NGZ3 307 aa8.29□□□□□ -1.08
LINC01940-201ENST00000455228 ZNF721Q8TF20 911 aa8.29□□□□□ -1.08
LINC01940-201ENST00000455228 EMG1Q92979 244 aaKnown RBP8.29□□□□□ -1.08
LINC01940-201ENST00000455228 VCX2Q9H322 139 aa8.29□□□□□ -1.08
LINC01940-201ENST00000455228 MCTS1Q9ULC4 181 aaKnown RBP8.29□□□□□ -1.08
LINC01940-201ENST00000455228 URGCP-MRPS24S4R325 110 aa8.29□□□□□ -1.08
LINC01940-201ENST00000455228 A0A0A6YYD4 124 aa8.29□□□□□ -1.08
LINC01940-201ENST00000455228 A0A1W2PQD3 144 aa8.29□□□□□ -1.08
LINC01940-201ENST00000455228 FIGNL2A6NMB9 653 aa8.29□□□□□ -1.08
LINC01940-201ENST00000455228 DDAH2O95865 285 aa8.29□□□□□ -1.08
LINC01940-201ENST00000455228 APOBEC1P41238 236 aaKnown RBP8.29□□□□□ -1.08
LINC01940-201ENST00000455228 CARD17Q5XLA6 110 aa8.29□□□□□ -1.08
LINC01940-201ENST00000455228 ZNF787Q6DD87 383 aa8.29□□□□□ -1.08
LINC01940-201ENST00000455228 SGPP2Q8IWX5 399 aa8.29□□□□□ -1.08
LINC01940-201ENST00000455228 OR1B1Q8NGR6 318 aa8.29□□□□□ -1.08
LINC01940-201ENST00000455228 GPR84Q9NQS5 396 aa8.29□□□□□ -1.08
LINC01940-201ENST00000455228 DOCK8Q8NF50 2099 aa8.29□□□□□ -1.08
LINC01940-201ENST00000455228 SPTY2D1-AS1A0A0U1RR47 76 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 MAP1LC3B2A6NCE7 125 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 C19orf67A6NJJ6 358 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 F8WDY8 70 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 MS4A18H0YCH9 400 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 IGKV3-11P04433 115 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 BLVRBP30043 206 aaPredicted RBP8.28□□□□□ -1.08
LINC01940-201ENST00000455228 ID1P41134 155 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 GFERP55789 205 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 CLRN1P58418 232 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 LCN2P80188 198 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 MS4A18Q3C1V0 323 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 TMEM177Q53S58 311 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 ABHD17BQ5VST6 288 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 NECAP1Q8NC96 275 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 KCNK17Q96T54 332 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 NIPSNAP3BQ9BS92 247 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 MAP1LC3BQ9GZQ8 125 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 SPANXA1Q9NS26 97 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 CHD9Q3L8U1 2897 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 CPAMD8Q8IZJ3 1885 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 SAA2-SAA4A0A096LPE2 208 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 TRAV1-1A0A0B4J248 108 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 IGHV5-51A0A0C4DH38 117 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 A0A1B0GV50 99 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 HBZP02008 142 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 HNRNPA3P51991 378 aaKnown RBP8.28□□□□□ -1.08
LINC01940-201ENST00000455228 TMEM50BP56557 158 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 C4orf17Q53FE4 359 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 FAM90A2PQ658T7 463 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 Q6ZVH6 145 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 LGI3Q8N145 548 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 KLHDC1Q8N7A1 406 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 NHLRC2Q8NBF2 726 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 TM2D1Q9BX74 207 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 SDF2L1Q9HCN8 221 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 KMT2EQ8IZD2 1858 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 BORCS7-ASMTA0A0B4J1R7 106 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 CD5LO43866 347 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 GCH1P30793 250 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 SPEM2Q0P670 501 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 TMEM92Q6UXU6 159 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 VN1R17PQ8TDU5 208 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 GALMQ96C23 342 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 RSG1Q9BU20 258 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 FBLN5Q9UBX5 448 aa8.28□□□□□ -1.08
LINC01940-201ENST00000455228 H0YL77 283 aa8.27□□□□□ -1.08
LINC01940-201ENST00000455228 ZNF708P17019 499 aa8.27□□□□□ -1.08
LINC01940-201ENST00000455228 VAMP3Q15836 100 aa8.27□□□□□ -1.08
LINC01940-201ENST00000455228 PCK2Q16822 640 aa8.27□□□□□ -1.08
LINC01940-201ENST00000455228 DOLPP1Q86YN1 238 aa8.27□□□□□ -1.08
LINC01940-201ENST00000455228 APCDD1LQ8NCL9 501 aa8.27□□□□□ -1.08
LINC01940-201ENST00000455228 OR2Y1Q8NGV0 311 aa8.27□□□□□ -1.08
LINC01940-201ENST00000455228 SLC25A40Q8TBP6 338 aa8.27□□□□□ -1.08
LINC01940-201ENST00000455228 C5orf30Q96GV9 206 aa8.27□□□□□ -1.08
LINC01940-201ENST00000455228 MRPL16Q9NX20 251 aaKnown RBP8.27□□□□□ -1.08
LINC01940-201ENST00000455228 ZNF586Q9NXT0 402 aa8.27□□□□□ -1.08
LINC01940-201ENST00000455228 TRAV38-1A0A0B4J264 116 aa8.27□□□□□ -1.09
LINC01940-201ENST00000455228 LILRA1O75019 489 aa8.27□□□□□ -1.09
LINC01940-201ENST00000455228 THBDP07204 575 aa8.27□□□□□ -1.09
LINC01940-201ENST00000455228 ATP6V0CP27449 155 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms