RNA–Protein interactions for RNA: ENST00000454018.6

SYNE1-214, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 1,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-214ENST00000454018 BPIFB3P59826 476 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 HTD2P86397 168 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 SCGB2A2Q13296 93 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 IL18Q14116 193 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 SPANXN2Q5MJ10 180 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 PYHIN1Q6K0P9 492 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 LINC00299Q6ZSB3 139 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 SNX29P2Q8IUI4 249 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 STPG3Q8N7X2 389 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 OR4A4PQ8NGN8 299 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 OR6Q1Q8NGQ2 317 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 GCDHQ92947 438 aaPredicted RBP7.15□□□□□ -1.27
SYNE1-214ENST00000454018 LHX4Q969G2 390 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 CABLES2Q9BTV7 478 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 CLEC7AQ9BXN2 247 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 IFT46Q9NQC8 304 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 TPSG1Q9NRR2 321 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 GNG12Q9UBI6 72 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 ZNF230Q9UIE0 474 aaPredicted RBP7.15□□□□□ -1.27
SYNE1-214ENST00000454018 JPT1Q9UK76 154 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 IGHV2-26A0A0B4J1V2 119 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 IGHV1-69DA0A0B4J2H0 117 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 CENPVL3A0A0U1RRI6 287 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 CTDSPLO15194 276 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 MMP23AO75900 390 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 RGS11O94810 467 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 IGHV1-69P01742 117 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 IGHV4-38-2P0DP08 117 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 PTHLHP12272 177 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 NFYBP25208 207 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 PTBP1P26599 531 aaKnown RBP eCLIP7.14□□□□□ -1.27
SYNE1-214ENST00000454018 SRP14P37108 136 aaKnown RBP7.14□□□□□ -1.27
SYNE1-214ENST00000454018 GDNFP39905 211 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 ETV6P41212 452 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 UBE2E1P51965 193 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 LOXL3P58215 753 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 ACTBP60709 375 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 ACTG1P63261 375 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 KLRD1Q13241 179 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 KLF17Q5JT82 389 aaPredicted RBP7.14□□□□□ -1.27
SYNE1-214ENST00000454018 FAM131AQ6UXB0 335 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 CCDC190Q86UF4 302 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 HOGA1Q86XE5 327 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 BEST4Q8NFU0 473 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 OR11H6Q8NGC7 330 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 OR1L1Q8NH94 360 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 RFESDQ8TAC1 157 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 GPX8Q8TED1 209 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 SMIM4Q8WVI0 70 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 IL1F10Q8WWZ1 152 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 SUCNR1Q9BXA5 334 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 OR2S2Q9NQN1 319 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 TMEM140Q9NV12 185 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 ANXA10Q9UJ72 324 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 NUP50Q9UKX7 468 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 ANAPC10Q9UM13 185 aa7.14□□□□□ -1.27
SYNE1-214ENST00000454018 MEIOCA2RUB1 952 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 FABP12A6NFH5 140 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 HMX3A6NHT5 357 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 ODF3BA8MYP8 253 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 INAFM1C9JVW0 142 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 GABARAPH6UMI1 98 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 HSPA12AO43301 675 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 CTXN2P0C2S0 81 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 SRD5A1P18405 259 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 ZBTB25P24278 435 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 COX7A1P24310 79 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 RCVRNP35243 200 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 DLX1P56177 255 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 TAS2R46P59540 309 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 ARPC4P59998 168 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 SSBP1Q04837 148 aaKnown RBP7.13□□□□□ -1.27
SYNE1-214ENST00000454018 MADCAM1Q13477 382 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 RAB32Q13637 225 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 HERPUD1Q15011 391 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 LTC4SQ16873 150 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 CHRFAM7AQ494W8 412 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 MIDNQ504T8 468 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 LY6G6FQ5SQ64 297 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 ZNF626Q68DY1 528 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 HCP5Q6MZN7 132 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 C9orf139Q6ZV77 190 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 Q71RC1 249 aaPredicted RBP7.13□□□□□ -1.27
SYNE1-214ENST00000454018 PNKDQ8N490 385 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 C8orf31Q8N9H6 132 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 BEND2Q8NDZ0 799 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 OR9G1Q8NH87 305 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 UBALD1Q8TB05 177 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 ZNF596Q8TC21 504 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 FCAMRQ8WWV6 532 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 MAFIPQ8WZ33 124 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 ABHD1Q96SE0 405 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 ST6GALNAC5Q9BVH7 336 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 BEX2Q9BXY8 128 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 SLC23A1Q9UHI7 598 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 TBL2Q9Y4P3 447 aaKnown RBP7.13□□□□□ -1.27
SYNE1-214ENST00000454018 V9GYH0 126 aa7.13□□□□□ -1.27
SYNE1-214ENST00000454018 IGKV1D-8A0A087WSZ0 117 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 IGHV3-43A0A0B4J1X8 118 aa7.12□□□□□ -1.27
SYNE1-214ENST00000454018 FAM172BPA6NC97 362 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms