RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 WDR25Q64LD2 544 aaPredicted RBP9.54□□□□□ -0.88
DDR1-239ENST00000452441 OR52L2PQ8NGH6 319 aa9.54□□□□□ -0.88
DDR1-239ENST00000452441 SLC35B3Q9H1N7 401 aa9.54□□□□□ -0.88
DDR1-239ENST00000452441 DYNLRB1Q9NP97 96 aa9.54□□□□□ -0.88
DDR1-239ENST00000452441 ZNF391Q9UJN7 358 aa9.54□□□□□ -0.88
DDR1-239ENST00000452441 PROCRQ9UNN8 238 aa9.54□□□□□ -0.88
DDR1-239ENST00000452441 TMED3Q9Y3Q3 217 aa9.54□□□□□ -0.88
DDR1-239ENST00000452441 CRYAAP02489 173 aa9.54□□□□□ -0.88
DDR1-239ENST00000452441 RAB4BP61018 213 aa9.54□□□□□ -0.88
DDR1-239ENST00000452441 TLE4Q04727 773 aa9.54□□□□□ -0.88
DDR1-239ENST00000452441 SURF2Q15527 256 aaPredicted RBP9.54□□□□□ -0.88
DDR1-239ENST00000452441 FAM201AQ5SY85 155 aa9.54□□□□□ -0.88
DDR1-239ENST00000452441 TNRC18O15417 2968 aaPredicted RBP9.54□□□□□ -0.88
DDR1-239ENST00000452441 TRAV17A0A0B4J275 112 aa9.54□□□□□ -0.88
DDR1-239ENST00000452441 RBFOX3A6NFN3 312 aa9.54□□□□□ -0.88
DDR1-239ENST00000452441 ST8SIA5O15466 376 aa9.54□□□□□ -0.88
DDR1-239ENST00000452441 CYTIPO60759 359 aa9.54□□□□□ -0.88
DDR1-239ENST00000452441 APELAP0DMC3 54 aa9.54□□□□□ -0.88
DDR1-239ENST00000452441 EIF2S3P41091 472 aaKnown RBP9.54□□□□□ -0.88
DDR1-239ENST00000452441 H3F3AP84243 136 aa9.54□□□□□ -0.88
DDR1-239ENST00000452441 FBXW9Q5XUX1 488 aa9.54□□□□□ -0.88
DDR1-239ENST00000452441 ZNF561Q8N587 486 aa9.54□□□□□ -0.88
DDR1-239ENST00000452441 MT-ND4LP03901 98 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 NAT2P11245 290 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 SNCAP37840 140 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 GNG10P50151 68 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 TMEM37Q8WXS4 190 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 TNCP24821 2201 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 A0A1W2PPV4 95 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 ACTL6BO94805 426 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 GAPDHP04406 335 aaKnown RBP9.53□□□□□ -0.88
DDR1-239ENST00000452441 IRF2P14316 349 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 VWA1Q6PCB0 445 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 SSX3Q99909 188 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 IGLV3-32A0A0A0MS00 114 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 hCG_38984A0A1B0GV85 526 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 H3BQ15 152 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 CDX4O14627 284 aaPredicted RBP9.53□□□□□ -0.88
DDR1-239ENST00000452441 FCGR3BO75015 233 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 CD55P08174 381 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 CCL1P22362 96 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 DLK1P80370 383 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 H2BFWTQ7Z2G1 175 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 FAM185AQ8N0U4 392 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 ZCCHC24Q8N2G6 241 aaKnown RBP9.53□□□□□ -0.88
DDR1-239ENST00000452441 OR10D4PQ8NGN7 298 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 OR1L1Q8NH94 360 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 DDA1Q9BW61 102 aa9.53□□□□□ -0.88
DDR1-239ENST00000452441 ABCA2Q9BZC7 2435 aa9.52□□□□□ -0.88
DDR1-239ENST00000452441 ECI1P42126 302 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 PRB3Q04118 309 aaPredicted RBP9.52□□□□□ -0.89
DDR1-239ENST00000452441 SCCPDHQ8NBX0 429 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 SMIM7Q9BQ49 75 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 V9GYS6 101 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 LAMA5O15230 3695 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 ZNF503-AS2A6NEH8 195 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 RPL36A-HNRNPH2H7BZ11 118 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 DVL1O14640 695 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 SH2D1BO14796 132 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 FABP4P15090 132 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 RAB5AP20339 215 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 CHRNA7P36544 502 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 PMELP40967 661 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 HMGN3Q15651 99 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 C20orf204Q6ZNR8 217 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 PATZ1Q9HBE1 687 aaKnown RBP9.52□□□□□ -0.89
DDR1-239ENST00000452441 RPH3ALQ9UNE2 315 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 USP9YO00507 2555 aaPredicted RBP9.52□□□□□ -0.89
DDR1-239ENST00000452441 MALRD1Q5VYJ5 2156 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 TRDCB7Z8K6 153 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 VDAC1P21796 283 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 HOXA6P31267 233 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 LHX2P50458 406 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 S100A12P80511 92 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 GPR146Q96CH1 333 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 OR5B12Q96R08 314 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 CABLES2Q9BTV7 478 aa9.52□□□□□ -0.89
DDR1-239ENST00000452441 S100A8P05109 93 aa9.51□□□□□ -0.89
DDR1-239ENST00000452441 P2RY1P47900 373 aa9.51□□□□□ -0.89
DDR1-239ENST00000452441 RND3P61587 244 aa9.51□□□□□ -0.89
DDR1-239ENST00000452441 PDLIM3Q53GG5 364 aaPredicted RBP9.51□□□□□ -0.89
DDR1-239ENST00000452441 PRAMEF5Q5TYX0 476 aa9.51□□□□□ -0.89
DDR1-239ENST00000452441 CRIP3Q6Q6R5 217 aa9.51□□□□□ -0.89
DDR1-239ENST00000452441 TUBD1Q9UJT1 453 aa9.51□□□□□ -0.89
DDR1-239ENST00000452441 POMT1Q9Y6A1 747 aa9.51□□□□□ -0.89
DDR1-239ENST00000452441 PLXNB1O43157 2135 aa9.51□□□□□ -0.89
DDR1-239ENST00000452441 SONP18583 2426 aaKnown RBP9.51□□□□□ -0.89
DDR1-239ENST00000452441 C5orf52A6NGY3 159 aa9.51□□□□□ -0.89
DDR1-239ENST00000452441 DNPH1O43598 174 aa9.51□□□□□ -0.89
DDR1-239ENST00000452441 PGLYRP1O75594 196 aaPredicted RBP9.51□□□□□ -0.89
DDR1-239ENST00000452441 IGHV3-48P01763 117 aa9.51□□□□□ -0.89
DDR1-239ENST00000452441 DANCRP0C864 163 aa9.51□□□□□ -0.89
DDR1-239ENST00000452441 CLDN18P56856 261 aa9.51□□□□□ -0.89
DDR1-239ENST00000452441 ABHD5Q8WTS1 349 aa9.51□□□□□ -0.89
DDR1-239ENST00000452441 RAB39BQ96DA2 213 aa9.51□□□□□ -0.89
DDR1-239ENST00000452441 DLL3Q9NYJ7 618 aa9.51□□□□□ -0.89
DDR1-239ENST00000452441 MIOXQ9UGB7 285 aa9.51□□□□□ -0.89
DDR1-239ENST00000452441 LAMP3Q9UQV4 416 aa9.51□□□□□ -0.89
DDR1-239ENST00000452441 POLDIP2Q9Y2S7 368 aa9.51□□□□□ -0.89
DDR1-239ENST00000452441 MYO9AB2RTY4 2548 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms