RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 OR4K15Q8NH41 348 aa7.21□□□□□ -1.26
COL8A1-203ENST00000452013 OR56B4Q8NH76 319 aa7.21□□□□□ -1.26
COL8A1-203ENST00000452013 ASB13Q8WXK3 278 aa7.21□□□□□ -1.26
COL8A1-203ENST00000452013 DYRK2Q92630 601 aa7.21□□□□□ -1.26
COL8A1-203ENST00000452013 KIRREL1Q96J84 757 aa7.21□□□□□ -1.26
COL8A1-203ENST00000452013 SSX3Q99909 188 aa7.21□□□□□ -1.26
COL8A1-203ENST00000452013 NICN1Q9BSH3 213 aa7.21□□□□□ -1.26
COL8A1-203ENST00000452013 MED28Q9H204 178 aa7.21□□□□□ -1.26
COL8A1-203ENST00000452013 ABCG5Q9H222 651 aa7.21□□□□□ -1.26
COL8A1-203ENST00000452013 LIN7BQ9HAP6 207 aa7.21□□□□□ -1.26
COL8A1-203ENST00000452013 CHMP1AQ9HD42 196 aaPredicted RBP7.21□□□□□ -1.26
COL8A1-203ENST00000452013 ZNRD1Q9P1U0 126 aa7.21□□□□□ -1.26
COL8A1-203ENST00000452013 YLPM1P49750 1951 aaKnown RBP7.2□□□□□ -1.26
COL8A1-203ENST00000452013 NSD1Q96L73 2696 aaPredicted RBP7.2□□□□□ -1.26
COL8A1-203ENST00000452013 TMEM272A0A1B0GTI8 110 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 TMEM89A2RUT3 159 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 C15orf65H3BRN8 121 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 J3QR06 171 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 SDCBPO00560 298 aaPredicted RBP7.2□□□□□ -1.26
COL8A1-203ENST00000452013 PEX14O75381 377 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 IGLV1-47P01700 117 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 HKR1P10072 659 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 BRS3P32247 399 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 GDNFP39905 211 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 TMEM50BP56557 158 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 GNG2P59768 71 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 SSBP1Q04837 148 aaKnown RBP7.2□□□□□ -1.26
COL8A1-203ENST00000452013 FOXL1Q12952 345 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 SSX2Q16385 188 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 LTC4SQ16873 150 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 Q3ZCU0 254 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 LHFPL4Q7Z7J7 247 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 DTX3Q8N9I9 347 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 SMIM4Q8WVI0 70 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 RAB3CQ96E17 227 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 AJUBAQ96IF1 538 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 SULT4A1Q9BR01 284 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 CHIAQ9BZP6 476 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 KCNK15Q9H427 330 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 TAF9BQ9HBM6 251 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 ZNF286AQ9HBT8 521 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 RANGRFQ9HD47 186 aaPredicted RBP7.2□□□□□ -1.26
COL8A1-203ENST00000452013 MBNL3Q9NUK0 354 aaKnown RBP7.2□□□□□ -1.26
COL8A1-203ENST00000452013 TAS2R8Q9NYW2 309 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 MGAT4AQ9UM21 535 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 PSG11Q9UQ72 335 aa7.2□□□□□ -1.26
COL8A1-203ENST00000452013 AMMECR1Q9Y4X0 333 aaPredicted RBP7.2□□□□□ -1.26
COL8A1-203ENST00000452013 SETD2Q9BYW2 2564 aaPredicted RBP7.19□□□□□ -1.26
COL8A1-203ENST00000452013 A0A0A6YYD4 124 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 SMIM30A4D0T7 59 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 FAM181BA6NEQ2 426 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 OOSP1A8MZH6 123 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 C12orf77C9JDV5 145 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 BUB1B-PAK6H3BSN5 160 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 GABARAPH6UMI1 98 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 F2RL2O00254 374 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 GPR137BO60478 399 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 SCGNO76038 276 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 HBZP02008 142 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 EIF4EP06730 217 aaKnown RBP7.19□□□□□ -1.26
COL8A1-203ENST00000452013 ANXA3P12429 323 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 RCC1P18754 421 aaPredicted RBP7.19□□□□□ -1.26
COL8A1-203ENST00000452013 SSTR5P35346 364 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 FAUP35544 74 aaKnown RBP7.19□□□□□ -1.26
COL8A1-203ENST00000452013 DYNLT3P51808 116 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 HLA-DRB5Q30154 266 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 THOC7Q6I9Y2 204 aaKnown RBP7.19□□□□□ -1.26
COL8A1-203ENST00000452013 CCDC144NLQ6NUI1 221 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 C12orf54Q6X4T0 127 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 PRR18Q8N4B5 295 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 C8orf31Q8N9H6 132 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 OR4P4Q8NGL7 312 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 OR10R2Q8NGX6 335 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 MRPL30Q8TCC3 161 aaKnown RBP7.19□□□□□ -1.26
COL8A1-203ENST00000452013 C17orf50Q8WW18 174 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 PHF21AQ96BD5 680 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 GALMQ96C23 342 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 S100A16Q96FQ6 103 aaKnown RBP7.19□□□□□ -1.26
COL8A1-203ENST00000452013 ARHGAP5-AS1Q96IT6 56 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 CMSS1Q9BQ75 279 aaKnown RBP7.19□□□□□ -1.26
COL8A1-203ENST00000452013 PECRQ9BY49 303 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 ATG5Q9H1Y0 275 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 RAB18Q9NP72 206 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 GFOD1Q9NXC2 390 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 GNG12Q9UBI6 72 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 PITPNC1Q9UKF7 332 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 VPREB3Q9UKI3 123 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 HILPDAQ9Y5L2 63 aa7.19□□□□□ -1.26
COL8A1-203ENST00000452013 TRBV6-6A0A0A6YYG2 114 aa7.18□□□□□ -1.26
COL8A1-203ENST00000452013 A0A0B4J293 547 aa7.18□□□□□ -1.26
COL8A1-203ENST00000452013 A0A1B0GUS0 222 aa7.18□□□□□ -1.26
COL8A1-203ENST00000452013 LINC00854A0A1B0GVQ3 168 aa7.18□□□□□ -1.26
COL8A1-203ENST00000452013 FOXI3A8MTJ6 420 aaPredicted RBP7.18□□□□□ -1.26
COL8A1-203ENST00000452013 H3BUX3 64 aa7.18□□□□□ -1.26
COL8A1-203ENST00000452013 RGS11O94810 467 aa7.18□□□□□ -1.26
COL8A1-203ENST00000452013 TCRBP04435 133 aa7.18□□□□□ -1.26
COL8A1-203ENST00000452013 LPLP06858 475 aa7.18□□□□□ -1.26
COL8A1-203ENST00000452013 CD3GP09693 182 aa7.18□□□□□ -1.26
COL8A1-203ENST00000452013 IL3RAP26951 378 aa7.18□□□□□ -1.26
COL8A1-203ENST00000452013 COMPP49747 757 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms