RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 MAP2K4P45985 399 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 GPR12P47775 334 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 F2RL1P55085 397 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 RPL23AP62750 156 aaKnown RBP6.84□□□□□ -1.31
RFX3-209ENST00000451859 RPS27AP62979 156 aaKnown RBP6.84□□□□□ -1.31
RFX3-209ENST00000451859 SLC35A2P78381 396 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 UNC119Q13432 240 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 IRF3Q14653 427 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 MORN2Q502X0 79 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 RNLSQ5VYX0 342 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 UNQ9370/PRO34162Q6UXP9 181 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 IZUMO2Q6UXV1 221 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 Q6ZPA2 131 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 GAPTQ8N292 157 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 STPG2Q8N412 459 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 Q8N6K4 173 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 C8orf31Q8N9H6 132 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 Q8N9W7 124 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 CHPT1Q8WUD6 406 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 PHYHIPQ92561 330 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 ST6GALNAC6Q969X2 333 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 CNBD2Q96M20 576 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 S1PR3Q99500 378 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 RASL11BQ9BPW5 248 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 HSPB9Q9BQS6 159 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 ABHD14AQ9BUJ0 271 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 GHRLQ9UBU3 117 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 AK6Q9Y3D8 172 aaKnown RBP6.84□□□□□ -1.31
RFX3-209ENST00000451859 A0A0A6YYD4 124 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 AP4M1O00189 453 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 TXNL1O43396 289 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 GLAP06280 429 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 UCHL1P09936 223 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 CD1BP29016 333 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 HOXD3P31249 432 aaPredicted RBP6.83□□□□□ -1.32
RFX3-209ENST00000451859 OR3A3P47888 321 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 CLDN12P56749 244 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 LSAMPQ13449 338 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 EBI3Q14213 229 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 MMDQ15546 238 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 RAB11BQ15907 218 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 DEFB136Q30KP8 78 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 TMEM30BQ3MIR4 351 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 C1orf100Q5SVJ3 147 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 ETV3LQ6ZN32 361 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 OR2W3Q7Z3T1 314 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 REC114Q7Z4M0 266 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 MRPL41Q8IXM3 137 aaKnown RBP6.83□□□□□ -1.32
RFX3-209ENST00000451859 OR2AK2Q8NG84 335 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 OR51D1Q8NGF3 324 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 OR6M1Q8NGM8 313 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 KCNG3Q8TAE7 436 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 GALMQ96C23 342 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 HDHD3Q9BSH5 251 aaPredicted RBP6.83□□□□□ -1.32
RFX3-209ENST00000451859 MRPL20Q9BYC9 149 aaKnown RBP6.83□□□□□ -1.32
RFX3-209ENST00000451859 ABCG5Q9H222 651 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 MBNL3Q9NUK0 354 aaKnown RBP6.83□□□□□ -1.32
RFX3-209ENST00000451859 LIN7CQ9NUP9 197 aaKnown RBP6.83□□□□□ -1.32
RFX3-209ENST00000451859 PLEKHJ1Q9NW61 149 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 ABRACLQ9P1F3 81 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 JPT1Q9UK76 154 aa6.83□□□□□ -1.32
RFX3-209ENST00000451859 COL7A1Q02388 2944 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 SAA2-SAA4A0A096LPE2 208 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 TMEM14DPA8MWL7 114 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 SLC22A1O15245 554 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 SOCS1O15524 211 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 LANCL1O43813 399 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 RGS11O94810 467 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 BPNT1O95861 308 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 RPLP1P05386 114 aaKnown RBP6.82□□□□□ -1.32
RFX3-209ENST00000451859 SAA2P0DJI9 122 aaPredicted RBP6.82□□□□□ -1.32
RFX3-209ENST00000451859 ARSBP15848 533 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 VDAC1P21796 283 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 CRHBPP24387 322 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 CNTFRP26992 372 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 CALRP27797 417 aaKnown RBP6.82□□□□□ -1.32
RFX3-209ENST00000451859 SOX6P35712 828 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 ZNF137PP52743 207 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 FABP5Q01469 135 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 HMGN3Q15651 99 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 Q3ZCU0 254 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 HES5Q5TA89 166 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 TMEM91Q6ZNR0 172 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 ZNF695Q8IW36 515 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 LINC00482Q8N8I6 264 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 WFDC9Q8NEX5 89 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 GFI1Q99684 422 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 NABP2Q9BQ15 211 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 URM1Q9BTM9 101 aaKnown RBP6.82□□□□□ -1.32
RFX3-209ENST00000451859 TM2D1Q9BX74 207 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 ANKRD60Q9BZ19 345 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 PARP12Q9H0J9 701 aaKnown RBP6.82□□□□□ -1.32
RFX3-209ENST00000451859 VCX3BQ9H321 246 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 DUSP21Q9H596 190 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 PLSCR3Q9NRY6 295 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 STEAP1Q9UHE8 339 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 ZNF107Q9UII5 783 aaPredicted RBP6.82□□□□□ -1.32
RFX3-209ENST00000451859 AK3Q9UIJ7 227 aa6.82□□□□□ -1.32
RFX3-209ENST00000451859 SLC17A2O00624 439 aa6.81□□□□□ -1.32
RFX3-209ENST00000451859 RRP9O43818 475 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms