RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 CSF1P09603 554 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 DTYMKP23919 212 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 SAA4P35542 130 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 GLIPR1P48060 266 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 UBE2E1P51965 193 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 RPL31P62899 125 aaKnown RBP13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 C6orf183Q5T699 404 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 OLFML2AQ68BL7 652 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 TMEM200BQ69YZ2 307 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 HCP5Q6MZN7 132 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 TRAT1Q6PIZ9 186 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 MOB1BQ7L9L4 216 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 TRAPPC6BQ86SZ2 158 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 OR4F5Q8NH21 305 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 C17orf50Q8WW18 174 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 DYRK2Q92630 601 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 COQ2Q96H96 371 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 ST6GAL2Q96JF0 529 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 MED28Q9H204 178 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 BEX1Q9HBH7 125 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 RAB9BQ9NP90 201 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 IFT46Q9NQC8 304 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 KCNIP1Q9NZI2 227 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 ZNRD1Q9P1U0 126 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 KIF25Q9UIL4 384 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 RBMX2Q9Y388 322 aaKnown RBP13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 TRBV6-6A0A0A6YYG2 114 aa13.86□□□□□ -0.19
PRPF40A-204ENST00000450303 ANKRD20A5PA0PJZ0 165 aa13.86□□□□□ -0.19
PRPF40A-204ENST00000450303 ODAMA1E959 279 aa13.86□□□□□ -0.19
PRPF40A-204ENST00000450303 LPLP06858 475 aa13.86□□□□□ -0.19
PRPF40A-204ENST00000450303 CCL3L1P16619 93 aa13.86□□□□□ -0.19
PRPF40A-204ENST00000450303 GZMHP20718 246 aa13.86□□□□□ -0.19
PRPF40A-204ENST00000450303 ACTBP60709 375 aa13.86□□□□□ -0.19
PRPF40A-204ENST00000450303 NCR3LG1Q68D85 454 aa13.86□□□□□ -0.19
PRPF40A-204ENST00000450303 TCTE3Q8IZS6 198 aa13.86□□□□□ -0.19
PRPF40A-204ENST00000450303 GAPTQ8N292 157 aa13.86□□□□□ -0.19
PRPF40A-204ENST00000450303 OR4K15Q8NH41 348 aa13.86□□□□□ -0.19
PRPF40A-204ENST00000450303 MRPL30Q8TCC3 161 aaKnown RBP13.86□□□□□ -0.19
PRPF40A-204ENST00000450303 NUDCD2Q8WVJ2 157 aa13.86□□□□□ -0.19
PRPF40A-204ENST00000450303 HRASLSQ9HDD0 168 aa13.86□□□□□ -0.19
PRPF40A-204ENST00000450303 NUDT15Q9NV35 164 aa13.86□□□□□ -0.19
PRPF40A-204ENST00000450303 UBE2J1Q9Y385 318 aaPredicted RBP13.86□□□□□ -0.19
PRPF40A-204ENST00000450303 MMP24Q9Y5R2 645 aa13.86□□□□□ -0.19
PRPF40A-204ENST00000450303 TRAV6A0A075B6T7 132 aa13.85□□□□□ -0.19
PRPF40A-204ENST00000450303 NDUFA7O95182 113 aa13.85□□□□□ -0.19
PRPF40A-204ENST00000450303 NAPSAO96009 420 aa13.85□□□□□ -0.19
PRPF40A-204ENST00000450303 PAX6P26367 422 aa13.85□□□□□ -0.19
PRPF40A-204ENST00000450303 BTCP35070 178 aa13.85□□□□□ -0.19
PRPF40A-204ENST00000450303 ZNF273Q14593 569 aa13.85□□□□□ -0.19
PRPF40A-204ENST00000450303 SRSF7Q16629 238 aaKnown RBP eCLIP13.85□□□□□ -0.19
PRPF40A-204ENST00000450303 RTN4RL2Q86UN3 420 aa13.85□□□□□ -0.19
PRPF40A-204ENST00000450303 TPRX1Q8N7U7 411 aa13.85□□□□□ -0.19
PRPF40A-204ENST00000450303 CCDC107Q8WV48 283 aa13.85□□□□□ -0.19
PRPF40A-204ENST00000450303 CORO2AQ92828 525 aa13.85□□□□□ -0.19
PRPF40A-204ENST00000450303 ZNF486Q96H40 463 aaPredicted RBP13.85□□□□□ -0.19
PRPF40A-204ENST00000450303 OCSTAMPQ9BR26 566 aa13.85□□□□□ -0.19
PRPF40A-204ENST00000450303 HDHD3Q9BSH5 251 aaPredicted RBP13.85□□□□□ -0.19
PRPF40A-204ENST00000450303 TAS2R3Q9NYW6 316 aa13.85□□□□□ -0.19
PRPF40A-204ENST00000450303 ELF5Q9UKW6 265 aaPredicted RBP13.85□□□□□ -0.19
PRPF40A-204ENST00000450303 LINC00312Q9Y6C7 94 aa13.85□□□□□ -0.19
PRPF40A-204ENST00000450303 DSCAML1Q8TD84 2053 aa13.85□□□□□ -0.19
PRPF40A-204ENST00000450303 A0A0B4J293 547 aa13.84□□□□□ -0.19
PRPF40A-204ENST00000450303 CLPSL1A2RUU4 121 aa13.84□□□□□ -0.19
PRPF40A-204ENST00000450303 C7orf66A4D0T2 115 aa13.84□□□□□ -0.19
PRPF40A-204ENST00000450303 FCGR3AP08637 254 aa13.84□□□□□ -0.19
PRPF40A-204ENST00000450303 PTHLHP12272 177 aa13.84□□□□□ -0.19
PRPF40A-204ENST00000450303 COX7A1P24310 79 aa13.84□□□□□ -0.19
PRPF40A-204ENST00000450303 GLP1RP43220 463 aa13.84□□□□□ -0.19
PRPF40A-204ENST00000450303 KIR2DS4P43632 304 aa13.84□□□□□ -0.19
PRPF40A-204ENST00000450303 CD83Q01151 205 aa13.84□□□□□ -0.19
PRPF40A-204ENST00000450303 KIR2DS1Q14954 304 aa13.84□□□□□ -0.19
PRPF40A-204ENST00000450303 C11orf42Q8N5U0 333 aa13.84□□□□□ -0.19
PRPF40A-204ENST00000450303 GPX8Q8TED1 209 aa13.84□□□□□ -0.19
PRPF40A-204ENST00000450303 ST6GALNAC5Q9BVH7 336 aa13.84□□□□□ -0.19
PRPF40A-204ENST00000450303 GAL3ST2Q9H3Q3 398 aa13.84□□□□□ -0.19
PRPF40A-204ENST00000450303 ZNF286AQ9HBT8 521 aa13.84□□□□□ -0.19
PRPF40A-204ENST00000450303 Q9N2K0 584 aa13.84□□□□□ -0.19
PRPF40A-204ENST00000450303 MTFP1Q9UDX5 166 aa13.84□□□□□ -0.19
PRPF40A-204ENST00000450303 A0A1B0GUS0 222 aa13.83□□□□□ -0.2
PRPF40A-204ENST00000450303 hCG_1809904A0A1W2PP81 198 aa13.83□□□□□ -0.2
PRPF40A-204ENST00000450303 A0A1W2PPE2 198 aa13.83□□□□□ -0.2
PRPF40A-204ENST00000450303 A0A1W2PR64 198 aa13.83□□□□□ -0.2
PRPF40A-204ENST00000450303 A0A1W2PRV1 198 aa13.83□□□□□ -0.2
PRPF40A-204ENST00000450303 BTBD17A6NE02 478 aa13.83□□□□□ -0.2
PRPF40A-204ENST00000450303 ZNF729A6NN14 1252 aaPredicted RBP13.83□□□□□ -0.2
PRPF40A-204ENST00000450303 SSX5O60225 188 aa13.83□□□□□ -0.2
PRPF40A-204ENST00000450303 PEX14O75381 377 aa13.83□□□□□ -0.2
PRPF40A-204ENST00000450303 RCVRNP35243 200 aa13.83□□□□□ -0.2
PRPF40A-204ENST00000450303 ZNF880Q6PDB4 577 aa13.83□□□□□ -0.2
PRPF40A-204ENST00000450303 ZNF782Q6ZMW2 699 aaPredicted RBP13.83□□□□□ -0.2
PRPF40A-204ENST00000450303 LINC01006Q8NI28 216 aa13.83□□□□□ -0.2
PRPF40A-204ENST00000450303 MRGPRDQ8TDS7 321 aa13.83□□□□□ -0.2
PRPF40A-204ENST00000450303 WFDC12Q8WWY7 111 aa13.83□□□□□ -0.2
PRPF40A-204ENST00000450303 OR51J1Q9H342 316 aa13.83□□□□□ -0.2
PRPF40A-204ENST00000450303 GPN1Q9HCN4 374 aaPredicted RBP13.83□□□□□ -0.2
PRPF40A-204ENST00000450303 MBNL3Q9NUK0 354 aaKnown RBP13.83□□□□□ -0.2
PRPF40A-204ENST00000450303 MCUBQ9NWR8 336 aa13.83□□□□□ -0.2
PRPF40A-204ENST00000450303 ZNF107Q9UII5 783 aaPredicted RBP13.83□□□□□ -0.2
PRPF40A-204ENST00000450303 MEIS3P1A6NDR6 274 aa13.82□□□□□ -0.2
PRPF40A-204ENST00000450303 SPINT2O43291 252 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms