RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 FAM3DQ96BQ1 224 aa13.9□□□□□ -0.18
FAM3A-216ENST00000449971 GALMQ96C23 342 aa13.9□□□□□ -0.18
FAM3A-216ENST00000449971 EAF1Q96JC9 268 aaPredicted RBP13.9□□□□□ -0.18
FAM3A-216ENST00000449971 ABRACLQ9P1F3 81 aa13.9□□□□□ -0.18
FAM3A-216ENST00000449971 NCBP2LA6PVI3 153 aaKnown RBP13.89□□□□□ -0.19
FAM3A-216ENST00000449971 RANBP1P43487 201 aa13.89□□□□□ -0.19
FAM3A-216ENST00000449971 HTD2P86397 168 aa13.89□□□□□ -0.19
FAM3A-216ENST00000449971 EBI3Q14213 229 aa13.89□□□□□ -0.19
FAM3A-216ENST00000449971 FAM89BQ8N5H3 189 aa13.89□□□□□ -0.19
FAM3A-216ENST00000449971 C5orf56Q8N8D9 126 aa13.89□□□□□ -0.19
FAM3A-216ENST00000449971 IL1F10Q8WWZ1 152 aa13.89□□□□□ -0.19
FAM3A-216ENST00000449971 NDUFB11Q9NX14 153 aa13.89□□□□□ -0.19
FAM3A-216ENST00000449971 JPT1Q9UK76 154 aa13.89□□□□□ -0.19
FAM3A-216ENST00000449971 TRDV1A0A1B0GX56 115 aa13.88□□□□□ -0.19
FAM3A-216ENST00000449971 TCRBV4S1A1TA0A5B7 111 aa13.88□□□□□ -0.19
FAM3A-216ENST00000449971 ZNF736B4DX44 427 aaPredicted RBP13.88□□□□□ -0.19
FAM3A-216ENST00000449971 FGF16O43320 207 aa13.88□□□□□ -0.19
FAM3A-216ENST00000449971 TXNL1O43396 289 aa13.88□□□□□ -0.19
FAM3A-216ENST00000449971 RGS11O94810 467 aa13.88□□□□□ -0.19
FAM3A-216ENST00000449971 NAPSAO96009 420 aa13.88□□□□□ -0.19
FAM3A-216ENST00000449971 PF4P02776 101 aa13.88□□□□□ -0.19
FAM3A-216ENST00000449971 MYL9P24844 172 aa13.88□□□□□ -0.19
FAM3A-216ENST00000449971 CD1BP29016 333 aa13.88□□□□□ -0.19
FAM3A-216ENST00000449971 VEGFCP49767 419 aa13.88□□□□□ -0.19
FAM3A-216ENST00000449971 CD83Q01151 205 aa13.88□□□□□ -0.19
FAM3A-216ENST00000449971 HMGN3Q15651 99 aa13.88□□□□□ -0.19
FAM3A-216ENST00000449971 IZUMO1Q8IYV9 350 aa13.88□□□□□ -0.19
FAM3A-216ENST00000449971 SPARTQ8N0X7 666 aa13.88□□□□□ -0.19
FAM3A-216ENST00000449971 ABHD14AQ9BUJ0 271 aa13.88□□□□□ -0.19
FAM3A-216ENST00000449971 YTHDF1Q9BYJ9 559 aaKnown RBP13.88□□□□□ -0.19
FAM3A-216ENST00000449971 RIMS4Q9H426 269 aaPredicted RBP13.88□□□□□ -0.19
FAM3A-216ENST00000449971 STEAP1Q9UHE8 339 aa13.88□□□□□ -0.19
FAM3A-216ENST00000449971 AK3Q9UIJ7 227 aa13.88□□□□□ -0.19
FAM3A-216ENST00000449971 TRAV1-2A0A0B4J238 106 aa13.87□□□□□ -0.19
FAM3A-216ENST00000449971 YPEL1O60688 119 aa13.87□□□□□ -0.19
FAM3A-216ENST00000449971 MOSP00540 346 aa13.87□□□□□ -0.19
FAM3A-216ENST00000449971 PSMB9P28065 219 aa13.87□□□□□ -0.19
FAM3A-216ENST00000449971 HOXD3P31249 432 aaPredicted RBP13.87□□□□□ -0.19
FAM3A-216ENST00000449971 ZNF137PP52743 207 aa13.87□□□□□ -0.19
FAM3A-216ENST00000449971 OR10A3P58181 314 aa13.87□□□□□ -0.19
FAM3A-216ENST00000449971 KRTAP10-11P60412 298 aa13.87□□□□□ -0.19
FAM3A-216ENST00000449971 TCTEX1D4Q5JR98 221 aa13.87□□□□□ -0.19
FAM3A-216ENST00000449971 UBE2UQ5VVX9 321 aa13.87□□□□□ -0.19
FAM3A-216ENST00000449971 CD200R1LQ6Q8B3 271 aa13.87□□□□□ -0.19
FAM3A-216ENST00000449971 C10orf99Q6UWK7 81 aa13.87□□□□□ -0.19
FAM3A-216ENST00000449971 OR4X2Q8NGF9 303 aa13.87□□□□□ -0.19
FAM3A-216ENST00000449971 YPEL2Q96QA6 119 aa13.87□□□□□ -0.19
FAM3A-216ENST00000449971 HDHD3Q9BSH5 251 aaPredicted RBP13.87□□□□□ -0.19
FAM3A-216ENST00000449971 TMEM272A0A1B0GTI8 110 aa13.86□□□□□ -0.19
FAM3A-216ENST00000449971 SHISA3A0PJX4 238 aa13.86□□□□□ -0.19
FAM3A-216ENST00000449971 SERPINE3A8MV23 424 aa13.86□□□□□ -0.19
FAM3A-216ENST00000449971 LANCL1O43813 399 aa13.86□□□□□ -0.19
FAM3A-216ENST00000449971 TMEM50BP56557 158 aa13.86□□□□□ -0.19
FAM3A-216ENST00000449971 C22orf42Q6IC83 251 aa13.86□□□□□ -0.19
FAM3A-216ENST00000449971 ZNF880Q6PDB4 577 aa13.86□□□□□ -0.19
FAM3A-216ENST00000449971 MOB1BQ7L9L4 216 aa13.86□□□□□ -0.19
FAM3A-216ENST00000449971 Q8N6K4 173 aa13.86□□□□□ -0.19
FAM3A-216ENST00000449971 OR56B1Q8NGI3 324 aa13.86□□□□□ -0.19
FAM3A-216ENST00000449971 RBMXL1Q96E39 390 aaKnown RBP13.86□□□□□ -0.19
FAM3A-216ENST00000449971 ARHGAP5-AS1Q96IT6 56 aa13.86□□□□□ -0.19
FAM3A-216ENST00000449971 PECRQ9BY49 303 aa13.86□□□□□ -0.19
FAM3A-216ENST00000449971 RAB22AQ9UL26 194 aa13.86□□□□□ -0.19
FAM3A-216ENST00000449971 HSF4Q9ULV5 492 aa13.86□□□□□ -0.19
FAM3A-216ENST00000449971 PSMB11A5LHX3 300 aa13.85□□□□□ -0.19
FAM3A-216ENST00000449971 FOXI3A8MTJ6 420 aaPredicted RBP13.85□□□□□ -0.19
FAM3A-216ENST00000449971 LDLRAD4O15165 306 aa13.85□□□□□ -0.19
FAM3A-216ENST00000449971 RAB3BP20337 219 aa13.85□□□□□ -0.19
FAM3A-216ENST00000449971 GALP22466 123 aa13.85□□□□□ -0.19
FAM3A-216ENST00000449971 PLA2G7Q13093 441 aa13.85□□□□□ -0.19
FAM3A-216ENST00000449971 KHDC1LQ5JSQ8 128 aa13.85□□□□□ -0.19
FAM3A-216ENST00000449971 LY6G6FQ5SQ64 297 aa13.85□□□□□ -0.19
FAM3A-216ENST00000449971 SLC35E3Q7Z769 313 aa13.85□□□□□ -0.19
FAM3A-216ENST00000449971 ZNF329Q86UD4 541 aa13.85□□□□□ -0.19
FAM3A-216ENST00000449971 OR2AK2Q8NG84 335 aa13.85□□□□□ -0.19
FAM3A-216ENST00000449971 FCGR1BQ92637 280 aa13.85□□□□□ -0.19
FAM3A-216ENST00000449971 NOL4LQ96MY1 436 aaPredicted RBP13.85□□□□□ -0.19
FAM3A-216ENST00000449971 LINC00527Q9UJ94 153 aa13.85□□□□□ -0.19
FAM3A-216ENST00000449971 TSSC4Q9Y5U2 329 aaPredicted RBP13.85□□□□□ -0.19
FAM3A-216ENST00000449971 TRBV6-6A0A0A6YYG2 114 aa13.84□□□□□ -0.19
FAM3A-216ENST00000449971 IFITM5A6NNB3 132 aa13.84□□□□□ -0.19
FAM3A-216ENST00000449971 OR3A3P47888 321 aa13.84□□□□□ -0.19
FAM3A-216ENST00000449971 ODF3L1Q8IXM7 274 aa13.84□□□□□ -0.19
FAM3A-216ENST00000449971 Q8N9W7 124 aa13.84□□□□□ -0.19
FAM3A-216ENST00000449971 WFDC9Q8NEX5 89 aa13.84□□□□□ -0.19
FAM3A-216ENST00000449971 CHPT1Q8WUD6 406 aa13.84□□□□□ -0.19
FAM3A-216ENST00000449971 S1PR3Q99500 378 aa13.84□□□□□ -0.19
FAM3A-216ENST00000449971 RASL11BQ9BPW5 248 aa13.84□□□□□ -0.19
FAM3A-216ENST00000449971 CMSS1Q9BQ75 279 aaKnown RBP13.84□□□□□ -0.19
FAM3A-216ENST00000449971 C12orf4Q9NQ89 552 aa13.84□□□□□ -0.19
FAM3A-216ENST00000449971 PLSCR3Q9NRY6 295 aa13.84□□□□□ -0.19
FAM3A-216ENST00000449971 LINC01548A6NM66 108 aa13.83□□□□□ -0.2
FAM3A-216ENST00000449971 ST8SIA5O15466 376 aa13.83□□□□□ -0.2
FAM3A-216ENST00000449971 IGHG2P01859 326 aa13.83□□□□□ -0.2
FAM3A-216ENST00000449971 F2RL1P55085 397 aa13.83□□□□□ -0.2
FAM3A-216ENST00000449971 LSAMPQ13449 338 aa13.83□□□□□ -0.2
FAM3A-216ENST00000449971 PLAC9Q5JTB6 97 aa13.83□□□□□ -0.2
FAM3A-216ENST00000449971 ZNF773Q6PK81 442 aa13.83□□□□□ -0.2
FAM3A-216ENST00000449971 FOXRED2Q8IWF2 684 aa13.83□□□□□ -0.2
FAM3A-216ENST00000449971 OR8H1Q8NGG4 311 aa13.83□□□□□ -0.2
FAM3A-216ENST00000449971 MRPL20Q9BYC9 149 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms