RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 MRAPQ8TCY5 172 aa12.06□□□□□ -0.48
CHD3-205ENST00000449744 IL1F10Q8WWZ1 152 aa12.06□□□□□ -0.48
CHD3-205ENST00000449744 MGLLQ99685 303 aa12.06□□□□□ -0.48
CHD3-205ENST00000449744 ZFP57Q9NU63 452 aa12.06□□□□□ -0.48
CHD3-205ENST00000449744 STEAP1Q9UHE8 339 aa12.06□□□□□ -0.48
CHD3-205ENST00000449744 AK6Q9Y3D8 172 aaKnown RBP12.06□□□□□ -0.48
CHD3-205ENST00000449744 ERICH4A6NGS2 130 aa12.05□□□□□ -0.48
CHD3-205ENST00000449744 LINC01548A6NM66 108 aa12.05□□□□□ -0.48
CHD3-205ENST00000449744 DUS4LO95620 317 aaKnown RBP12.05□□□□□ -0.48
CHD3-205ENST00000449744 CD37P11049 281 aa12.05□□□□□ -0.48
CHD3-205ENST00000449744 MAP2K4P45985 399 aa12.05□□□□□ -0.48
CHD3-205ENST00000449744 QRFPP83859 136 aa12.05□□□□□ -0.48
CHD3-205ENST00000449744 LSAMPQ13449 338 aa12.05□□□□□ -0.48
CHD3-205ENST00000449744 HMGN3Q15651 99 aa12.05□□□□□ -0.48
CHD3-205ENST00000449744 RAB11BQ15907 218 aa12.05□□□□□ -0.48
CHD3-205ENST00000449744 FOXB2Q5VYV0 432 aa12.05□□□□□ -0.48
CHD3-205ENST00000449744 TEX38Q6PEX7 206 aa12.05□□□□□ -0.48
CHD3-205ENST00000449744 OR2W3Q7Z3T1 314 aa12.05□□□□□ -0.48
CHD3-205ENST00000449744 OR2AK2Q8NG84 335 aa12.05□□□□□ -0.48
CHD3-205ENST00000449744 RCC1LQ96I51 464 aaKnown RBP12.05□□□□□ -0.48
CHD3-205ENST00000449744 CNBD2Q96M20 576 aa12.05□□□□□ -0.48
CHD3-205ENST00000449744 RIMS4Q9H426 269 aaPredicted RBP12.05□□□□□ -0.48
CHD3-205ENST00000449744 PLSCR3Q9NRY6 295 aa12.05□□□□□ -0.48
CHD3-205ENST00000449744 BLOC1S6Q9UL45 172 aa12.05□□□□□ -0.48
CHD3-205ENST00000449744 NOTCH3Q9UM47 2321 aa12.04□□□□□ -0.48
CHD3-205ENST00000449744 SLC17A2O00624 439 aa12.04□□□□□ -0.48
CHD3-205ENST00000449744 CALRP27797 417 aaKnown RBP12.04□□□□□ -0.48
CHD3-205ENST00000449744 SLC6A1P30531 599 aa12.04□□□□□ -0.48
CHD3-205ENST00000449744 SOX6P35712 828 aa12.04□□□□□ -0.48
CHD3-205ENST00000449744 MMDQ15546 238 aa12.04□□□□□ -0.48
CHD3-205ENST00000449744 PNLIPRP3Q17RR3 467 aa12.04□□□□□ -0.48
CHD3-205ENST00000449744 LY6G6FQ5SQ64 297 aa12.04□□□□□ -0.48
CHD3-205ENST00000449744 MOB1BQ7L9L4 216 aa12.04□□□□□ -0.48
CHD3-205ENST00000449744 SVOPQ8N4V2 548 aa12.04□□□□□ -0.48
CHD3-205ENST00000449744 KLHL30-AS1Q8NEE0 82 aa12.04□□□□□ -0.48
CHD3-205ENST00000449744 LPAR5Q9H1C0 372 aa12.04□□□□□ -0.48
CHD3-205ENST00000449744 ACOT13Q9NPJ3 140 aa12.04□□□□□ -0.48
CHD3-205ENST00000449744 A0A0A6YYD4 124 aa12.03□□□□□ -0.48
CHD3-205ENST00000449744 SOCS1O15524 211 aa12.03□□□□□ -0.48
CHD3-205ENST00000449744 NAPSAO96009 420 aa12.03□□□□□ -0.48
CHD3-205ENST00000449744 VDAC1P21796 283 aa12.03□□□□□ -0.48
CHD3-205ENST00000449744 PSMD7P51665 324 aa12.03□□□□□ -0.48
CHD3-205ENST00000449744 F2RL1P55085 397 aa12.03□□□□□ -0.48
CHD3-205ENST00000449744 CXorf66Q5JRM2 361 aaPredicted RBP12.03□□□□□ -0.48
CHD3-205ENST00000449744 Q6ZPA2 131 aa12.03□□□□□ -0.48
CHD3-205ENST00000449744 C8orf86Q6ZUL3 223 aa12.03□□□□□ -0.48
CHD3-205ENST00000449744 ODF3L1Q8IXM7 274 aa12.03□□□□□ -0.48
CHD3-205ENST00000449744 FAM71E2Q8N5Q1 922 aa12.03□□□□□ -0.48
CHD3-205ENST00000449744 GFI1Q99684 422 aa12.03□□□□□ -0.48
CHD3-205ENST00000449744 ZNF251Q9BRH9 671 aa12.03□□□□□ -0.48
CHD3-205ENST00000449744 MRPL20Q9BYC9 149 aaKnown RBP12.03□□□□□ -0.48
CHD3-205ENST00000449744 AURKAIP1Q9NWT8 199 aaPredicted RBP12.03□□□□□ -0.48
CHD3-205ENST00000449744 MYCNOSP40205 109 aa12.02□□□□□ -0.49
CHD3-205ENST00000449744 THBS3P49746 956 aa12.02□□□□□ -0.49
CHD3-205ENST00000449744 CLDN12P56749 244 aa12.02□□□□□ -0.49
CHD3-205ENST00000449744 ACTBP60709 375 aa12.02□□□□□ -0.49
CHD3-205ENST00000449744 FABP5Q01469 135 aa12.02□□□□□ -0.49
CHD3-205ENST00000449744 TBCEQ15813 527 aaPredicted RBP12.02□□□□□ -0.49
CHD3-205ENST00000449744 ZNF880Q6PDB4 577 aa12.02□□□□□ -0.49
CHD3-205ENST00000449744 ZNF833PQ6ZTB9 187 aa12.02□□□□□ -0.49
CHD3-205ENST00000449744 C18orf65Q6ZTR6 163 aa12.02□□□□□ -0.49
CHD3-205ENST00000449744 ZNF367Q7RTV3 350 aa12.02□□□□□ -0.49
CHD3-205ENST00000449744 ZNF695Q8IW36 515 aa12.02□□□□□ -0.49
CHD3-205ENST00000449744 MRPL41Q8IXM3 137 aaKnown RBP12.02□□□□□ -0.49
CHD3-205ENST00000449744 LINC00482Q8N8I6 264 aa12.02□□□□□ -0.49
CHD3-205ENST00000449744 DPF1Q92782 380 aa12.02□□□□□ -0.49
CHD3-205ENST00000449744 RBMXL1Q96E39 390 aaKnown RBP12.02□□□□□ -0.49
CHD3-205ENST00000449744 NABP2Q9BQ15 211 aa12.02□□□□□ -0.49
CHD3-205ENST00000449744 HSPB9Q9BQS6 159 aa12.02□□□□□ -0.49
CHD3-205ENST00000449744 GPR61Q9BZJ8 451 aa12.02□□□□□ -0.49
CHD3-205ENST00000449744 PIPOXQ9P0Z9 390 aa12.02□□□□□ -0.49
CHD3-205ENST00000449744 ZNF107Q9UII5 783 aaPredicted RBP12.02□□□□□ -0.49
CHD3-205ENST00000449744 AK3Q9UIJ7 227 aa12.02□□□□□ -0.49
CHD3-205ENST00000449744 HSF4Q9ULV5 492 aa12.02□□□□□ -0.49
CHD3-205ENST00000449744 MGAT4AQ9UM21 535 aa12.02□□□□□ -0.49
CHD3-205ENST00000449744 V9GY05 133 aa12.02□□□□□ -0.49
CHD3-205ENST00000449744 SAA2-SAA4A0A096LPE2 208 aa12.01□□□□□ -0.49
CHD3-205ENST00000449744 PDCD5O14737 125 aa12.01□□□□□ -0.49
CHD3-205ENST00000449744 ST8SIA5O15466 376 aa12.01□□□□□ -0.49
CHD3-205ENST00000449744 ELANEP08246 267 aa12.01□□□□□ -0.49
CHD3-205ENST00000449744 SAA2P0DJI9 122 aaPredicted RBP12.01□□□□□ -0.49
CHD3-205ENST00000449744 SLC2A2P11168 524 aaPredicted RBP12.01□□□□□ -0.49
CHD3-205ENST00000449744 OR3A3P47888 321 aa12.01□□□□□ -0.49
CHD3-205ENST00000449744 VEGFCP49767 419 aa12.01□□□□□ -0.49
CHD3-205ENST00000449744 C2orf76Q3KRA6 126 aa12.01□□□□□ -0.49
CHD3-205ENST00000449744 FAM71F2Q6NXP2 309 aa12.01□□□□□ -0.49
CHD3-205ENST00000449744 ETV3LQ6ZN32 361 aa12.01□□□□□ -0.49
CHD3-205ENST00000449744 FAM89BQ8N5H3 189 aa12.01□□□□□ -0.49
CHD3-205ENST00000449744 OR56B1Q8NGI3 324 aa12.01□□□□□ -0.49
CHD3-205ENST00000449744 FAM3DQ96BQ1 224 aa12.01□□□□□ -0.49
CHD3-205ENST00000449744 MCRIP2Q9BUT9 160 aaKnown RBP12.01□□□□□ -0.49
CHD3-205ENST00000449744 IFI27L2Q9H2X8 130 aa12.01□□□□□ -0.49
CHD3-205ENST00000449744 C12orf4Q9NQ89 552 aa12.01□□□□□ -0.49
CHD3-205ENST00000449744 KIAA1456Q9P272 454 aa12.01□□□□□ -0.49
CHD3-205ENST00000449744 RAB26Q9ULW5 256 aa12.01□□□□□ -0.49
CHD3-205ENST00000449744 TRBV6-6A0A0A6YYG2 114 aa12□□□□□ -0.49
CHD3-205ENST00000449744 RAB29O14966 203 aa12□□□□□ -0.49
CHD3-205ENST00000449744 NBR2O15453 112 aa12□□□□□ -0.49
CHD3-205ENST00000449744 HSPA12AO43301 675 aa12□□□□□ -0.49
CHD3-205ENST00000449744 DENRO43583 198 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms