RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 VSIG8P0DPA2 414 aa8.47□□□□□ -1.05
SRRT-205ENST00000449389 MYF6P23409 242 aa8.47□□□□□ -1.05
SRRT-205ENST00000449389 HTR2CP28335 458 aa8.47□□□□□ -1.05
SRRT-205ENST00000449389 RAB25P57735 213 aa8.47□□□□□ -1.05
SRRT-205ENST00000449389 ACTBP60709 375 aa8.47□□□□□ -1.05
SRRT-205ENST00000449389 SPHARQ15513 63 aa8.47□□□□□ -1.05
SRRT-205ENST00000449389 HMGN3Q15651 99 aa8.47□□□□□ -1.05
SRRT-205ENST00000449389 HSD17B12Q53GQ0 312 aa8.47□□□□□ -1.05
SRRT-205ENST00000449389 FAM27D1Q5T7N8 215 aa8.47□□□□□ -1.05
SRRT-205ENST00000449389 OR10K2Q6IF99 312 aa8.47□□□□□ -1.05
SRRT-205ENST00000449389 LCNL1Q6ZST4 164 aa8.47□□□□□ -1.05
SRRT-205ENST00000449389 MOB1BQ7L9L4 216 aa8.47□□□□□ -1.05
SRRT-205ENST00000449389 OR2AK2Q8NG84 335 aa8.47□□□□□ -1.05
SRRT-205ENST00000449389 CYYR1Q96J86 154 aa8.47□□□□□ -1.05
SRRT-205ENST00000449389 KCTD7Q96MP8 289 aa8.47□□□□□ -1.05
SRRT-205ENST00000449389 DUX3Q96PT4 197 aa8.47□□□□□ -1.05
SRRT-205ENST00000449389 NABP2Q9BQ15 211 aa8.47□□□□□ -1.05
SRRT-205ENST00000449389 TM2D1Q9BX74 207 aa8.47□□□□□ -1.05
SRRT-205ENST00000449389 MRPL20Q9BYC9 149 aaKnown RBP8.47□□□□□ -1.05
SRRT-205ENST00000449389 SCN3BQ9NY72 215 aa8.47□□□□□ -1.05
SRRT-205ENST00000449389 STEAP1Q9UHE8 339 aa8.47□□□□□ -1.05
SRRT-205ENST00000449389 LSM2Q9Y333 95 aaKnown RBP8.47□□□□□ -1.05
SRRT-205ENST00000449389 TENM3Q9P273 2699 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 PTGES3LE9PB15 166 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 SLC22A1O15245 554 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 BPNT1O95861 308 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 HLA-DRB1P01911 266 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 UCHL1P09936 223 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 CD37P11049 281 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 SLC2A2P11168 524 aaPredicted RBP8.46□□□□□ -1.06
SRRT-205ENST00000449389 SRMP19623 302 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 PSMB8P28062 276 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 DGCR2P98153 550 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 MED22Q15528 200 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 DEFB136Q30KP8 78 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 VAX1Q5SQQ9 334 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 FAM71F2Q6NXP2 309 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 ZNF833PQ6ZTB9 187 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 C6orf201Q7Z4U5 140 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 CEACAM19Q7Z692 300 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 ODF3L1Q8IXM7 274 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 SVOPQ8N4V2 548 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 OR6M1Q8NGM8 313 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 OR5M8Q8NGP6 311 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 C4orf3Q8WVX3 66 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 RBMXL1Q96E39 390 aaKnown RBP8.46□□□□□ -1.06
SRRT-205ENST00000449389 ZNF251Q9BRH9 671 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 FAAP24Q9BTP7 215 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 CHMP1AQ9HD42 196 aaPredicted RBP8.46□□□□□ -1.06
SRRT-205ENST00000449389 DNAH9Q9NYC9 4486 aa8.46□□□□□ -1.06
SRRT-205ENST00000449389 SAA2-SAA4A0A096LPE2 208 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 TMEM14DPA8MWL7 114 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 NBR2O15453 112 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 RAMP3O60896 148 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 NAPSAO96009 420 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 SAA2P0DJI9 122 aaPredicted RBP8.45□□□□□ -1.06
SRRT-205ENST00000449389 BLVRBP30043 206 aaPredicted RBP8.45□□□□□ -1.06
SRRT-205ENST00000449389 OR3A3P47888 321 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 CD69Q07108 199 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 UNC119Q13432 240 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 IRF3Q14653 427 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 C5orf64Q2M2E5 130 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 C9orf66Q5T8R8 295 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 ZNF880Q6PDB4 577 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 TMEM65Q6PI78 240 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 C5orf24Q7Z6I8 188 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 MYOZ3Q8TDC0 251 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 IL1F10Q8WWZ1 152 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 UFD1Q92890 307 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 B9D2Q9BPU9 175 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 NICN1Q9BSH3 213 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 URM1Q9BTM9 101 aaKnown RBP8.45□□□□□ -1.06
SRRT-205ENST00000449389 IFI27L2Q9H2X8 130 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 OR51J1Q9H342 316 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 RIMS4Q9H426 269 aaPredicted RBP8.45□□□□□ -1.06
SRRT-205ENST00000449389 PLEKHJ1Q9NW61 149 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 PIPOXQ9P0Z9 390 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 KIAA1456Q9P272 454 aa8.45□□□□□ -1.06
SRRT-205ENST00000449389 TRBV6-6A0A0A6YYG2 114 aa8.44□□□□□ -1.06
SRRT-205ENST00000449389 RAB29O14966 203 aa8.44□□□□□ -1.06
SRRT-205ENST00000449389 ATP6V0E1O15342 81 aa8.44□□□□□ -1.06
SRRT-205ENST00000449389 ST8SIA5O15466 376 aa8.44□□□□□ -1.06
SRRT-205ENST00000449389 NDUFA3O95167 84 aa8.44□□□□□ -1.06
SRRT-205ENST00000449389 PPIFP30405 207 aaKnown RBP8.44□□□□□ -1.06
SRRT-205ENST00000449389 LUMP51884 338 aaPredicted RBP8.44□□□□□ -1.06
SRRT-205ENST00000449389 QRFPP83859 136 aa8.44□□□□□ -1.06
SRRT-205ENST00000449389 TPBGQ13641 420 aa8.44□□□□□ -1.06
SRRT-205ENST00000449389 FHL3Q13643 280 aa8.44□□□□□ -1.06
SRRT-205ENST00000449389 TRAM1Q15629 374 aa8.44□□□□□ -1.06
SRRT-205ENST00000449389 LIPKQ5VXJ0 399 aa8.44□□□□□ -1.06
SRRT-205ENST00000449389 LIN54Q6MZP7 749 aa8.44□□□□□ -1.06
SRRT-205ENST00000449389 C11orf87Q6NUJ2 197 aa8.44□□□□□ -1.06
SRRT-205ENST00000449389 NPBQ8NG41 125 aa8.44□□□□□ -1.06
SRRT-205ENST00000449389 SETD6Q8TBK2 473 aa8.44□□□□□ -1.06
SRRT-205ENST00000449389 RITA1Q96K30 269 aa8.44□□□□□ -1.06
SRRT-205ENST00000449389 UBE2E2Q96LR5 201 aa8.44□□□□□ -1.06
SRRT-205ENST00000449389 ANKRD60Q9BZ19 345 aa8.44□□□□□ -1.06
SRRT-205ENST00000449389 GHITMQ9H3K2 345 aa8.44□□□□□ -1.06
SRRT-205ENST00000449389 KCNK15Q9H427 330 aa8.44□□□□□ -1.06
SRRT-205ENST00000449389 PLGRKTQ9HBL7 147 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms