RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 RNF133Q8WVZ7 376 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 NECAP2Q9NVZ3 263 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 CRYBB2P43320 205 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 GGNQ86UU5 652 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 NOL4LQ96MY1 436 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 FUZQ9BT04 418 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 GSX2Q9BZM3 304 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 TAS2R5Q9NYW4 299 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 PIPOXQ9P0Z9 390 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 USP9YO00507 2555 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 A0A1W2PPV4 95 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 MEIS3P1A6NDR6 274 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 MC5RP33032 325 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 RAB9AP51151 201 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 VMO1Q7Z5L0 202 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 EEF1AKMT3Q96AZ1 226 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 C16orf92Q96LL3 132 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 SLC29A1Q99808 456 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 SH3BGRL3Q9H299 93 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 MEF2DQ14814 521 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 CEACAM21Q3KPI0 293 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 PRSS57Q6UWY2 283 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 PRSS48Q7RTY5 328 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 GCSAMQ8N6F7 178 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 SGK494Q96LW2 274 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 AICDAQ9GZX7 198 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 SLC25A22Q9H936 323 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 ZNF107Q9UII5 783 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 GOLT1BQ9Y3E0 138 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 MED6O75586 246 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 PSKH1P11801 424 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 TDGF1P3P51864 188 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 PSG7Q13046 419 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 TEX30Q5JUR7 227 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 TCF23Q7RTU1 214 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 ANKRD60Q9BZ19 345 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 MED28Q9H204 178 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 TCRBV3S1A0A5B6 114 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 NPIPB9F8W1W9 429 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 GSTZ1O43708 216 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 NAT1P18440 290 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 ALOX5APP20292 161 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 TAGLNQ01995 201 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 AESQ08117 197 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 ZNF816Q0VGE8 651 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 LRRTM1Q86UE6 522 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 DTX2Q86UW9 622 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 THNSL2Q86YJ6 484 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 CLDND2Q8NHS1 167 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 HARBI1Q96MB7 349 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 BAHCC1Q9P281 2608 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 NPFFO15130 113 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 PLPP2O43688 288 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 SCGB1D1O95968 90 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 IGKV1D-33P01593 117 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 IGKV1-33P01594 117 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 DUTP33316 252 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 CEACAM6P40199 344 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 DAPP51397 102 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 ZNF329Q86UD4 541 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 OR8I2Q8N0Y5 310 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 PIP4P2Q8N4L2 257 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 RAB2BQ8WUD1 216 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 TMEM54Q969K7 222 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 GMPR2Q9P2T1 348 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 MALRD1Q5VYJ5 2156 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 TRGV2A0A075B6R0 118 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 FXYD1O00168 92 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 PDCD6O75340 191 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 ISG15P05161 165 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 MMP7P09237 267 aaPredicted RBP4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 MYOD1P15172 320 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 HIST1H3AP68431 136 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 PJVKQ0ZLH3 352 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 ADIPOQQ15848 244 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 ZNF561Q8N587 486 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 SAMD10Q9BYL1 202 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 C11orf68Q9H3H3 251 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 DIMT1Q9UNQ2 313 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 GOLGB1Q14789 3259 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 C20orf202A1L168 122 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 FCGR3BO75015 233 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 IFNA1P01562 189 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 RRASP10301 218 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 EPHA2P29317 976 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 FCER1GP30273 86 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 ERVS71-1P61550 626 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 MSRB3Q8IXL7 192 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 PRRT1Q99946 306 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 LIME1Q9H400 295 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 CDC42EP2O14613 210 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 CHEK1O14757 476 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 PPT1P50897 306 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 C1QL2Q7Z5L3 287 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 FAM169BQ8N8A8 192 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 KCNE5Q9UJ90 142 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 SOX21Q9Y651 276 aaPredicted RBP4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 EML6Q6ZMW3 1958 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 DOCK4Q8N1I0 1966 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 NCKAP5O14513 1909 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms