RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 ZNF90Q03938 601 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 OR8B8Q15620 311 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 TMEM211Q6ICI0 200 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 HAPLN4Q86UW8 402 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 OR10G9Q8NGN4 311 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 OR10G7Q8NGN6 311 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 PGPEP1LA6NFU8 196 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 GDF9O60383 454 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 MMP23AO75900 390 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 IGLV3-1P01715 115 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 SERPINE2P07093 398 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 Q6ZPA2 131 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 Q8N976 141 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 SVIPQ8NHG7 77 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 ZNF721Q8TF20 911 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 BORCS8Q96FH0 119 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 OR6C1Q96RD1 312 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 WNT10AQ9GZT5 417 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 NRN1Q9NPD7 142 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 IGKV1D-13A0A0B4J2D9 117 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 LIPT2A6NK58 231 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 SHISA8B8ZZ34 492 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 ZNF253O75346 499 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 OR7C1O76099 320 aaPredicted RBP8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 CRYAAP02489 173 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 IGKV1-13P0DP09 117 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 ACSM6Q6P461 480 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 SLC25A47Q6Q0C1 308 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 SPSB1Q96BD6 273 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 SFRP2Q96HF1 295 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 ALKBH4Q9NXW9 302 aa8.05□□□□□ -1.12
SYNPO2-204ENST00000448416 LOC102724200A0A096LPH7 203 aaPredicted RBP8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 VSTM2BA6NLU5 285 aa8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 CD300LBA8K4G0 201 aa8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 RNF212BA8MTL3 300 aa8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 FCN1O00602 326 aa8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 IGKV3-11P04433 115 aa8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 ZNF776Q68DI1 518 aaPredicted RBP8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 ERASQ7Z444 233 aa8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 CACNG5Q9UF02 275 aa8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 MRPS16Q9Y3D3 137 aaKnown RBP8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 SLC22A20A6NK97 555 aa8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 PIAS2O75928 621 aa8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 NDUFB4O95168 129 aa8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 PMCHP20382 165 aa8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 OR51H1Q8NH63 302 aa8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 TDRD6O60522 2096 aaKnown RBP8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 IGKV1-27A0A075B6S5 117 aa8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 H0Y980 276 aa8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 NAPSAO96009 420 aa8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 PRSS12P56730 875 aa8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 SLC38A11Q08AI6 406 aa8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 OR1K1Q8NGR3 316 aa8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 SLC37A2Q8TED4 501 aa8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 FAM131CQ96AQ9 280 aa8.04□□□□□ -1.12
SYNPO2-204ENST00000448416 KIAA1324LA8MWY0 1029 aaPredicted RBP8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 HOXB2P14652 356 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 S100GP29377 79 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 LHX8Q68G74 356 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 Q6ZRM9 215 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 ATOH7Q8N100 152 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 BATF2Q8N1L9 274 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 OR2M3Q8NG83 312 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 ST8SIA1Q92185 356 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 C10orf35Q96D05 121 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 ZNF816-ZNF321PA0A0X1KG74 233 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 LOC102725191A0A1B0GVB3 256 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 A0A1W2PRS3 328 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 DPRXA6NFQ7 191 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 PGLYRP1O75594 196 aaPredicted RBP8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 TIAF1O95411 115 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 SCTP09683 121 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 CTSSP25774 331 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 Q0VG73 95 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 CNN3Q15417 329 aaKnown RBP8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 CNKSR3Q6P9H4 555 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 ZNF114Q8NC26 417 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 GJC3Q8NFK1 279 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 ZNF596Q8TC21 504 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 ZNF501Q96CX3 271 aaPredicted RBP8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 LRFN3Q9BTN0 628 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 DERL1Q9BUN8 251 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 UBE2ZQ9H832 354 aaPredicted RBP8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 CLN8Q9UBY8 286 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 IGKV1-12A0A0C4DH73 117 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 M0R135 149 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 RBFOX2O43251 390 aaKnown RBP eCLIP8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 IGKV1D-12P01611 117 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 F2RP25116 425 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 IER3P46695 156 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 GNB1P62873 340 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 HLA-DRB5Q30154 266 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 C12orf76Q8N812 135 aaPredicted RBP8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 OR10G8Q8NGN5 311 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 OR2AE1Q8NHA4 323 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 ZNF799Q96GE5 643 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 TIMM9Q9Y5J7 89 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 IGHV1-69-2A0A0G2JMI3 117 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 AQP7P3A6NL99 342 aa8.03□□□□□ -1.12
SYNPO2-204ENST00000448416 TMPRSS2O15393 492 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms