RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 SLC25A1P53007 311 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 SLC39A5Q6ZMH5 540 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 WFDC3Q8IUB2 231 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 TMEM99Q8N816 258 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 GNRHR2Q96P88 292 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 JPT2Q9H910 190 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 A0A1W2PR48 441 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 DHHO43323 396 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 SPRY1O43609 319 aaPredicted RBP7.88□□□□□ -1.15
NIPBL-202ENST00000448238 HSPB1P04792 205 aaKnown RBP7.88□□□□□ -1.15
NIPBL-202ENST00000448238 SEC11AP67812 179 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 FZD5Q13467 585 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 NPWQ8N729 165 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 APOBEC4Q8WW27 367 aaKnown RBP7.88□□□□□ -1.15
NIPBL-202ENST00000448238 GPR27Q9NS67 375 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 SCN4AP35499 1836 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 SYNGR1O43759 233 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 CEACAM4O75871 244 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 TOMM40O96008 361 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 MRGPRX1Q96LB2 322 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 DEFB127Q9H1M4 99 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 PLEKHB1Q9UF11 243 aaPredicted RBP7.88□□□□□ -1.15
NIPBL-202ENST00000448238 CCL27Q9Y4X3 112 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 TNFRSF6BO95407 300 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 LINC00869P0C866 280 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 LIM2P55344 173 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 PSG6Q00889 435 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 AKIP1Q9NQ31 210 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 FRG2CA6NGY1 282 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 BCORP1Q8N888 145 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 TM4SF19Q96DZ7 209 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 TNRC6AQ8NDV7 1962 aaKnown RBP7.87□□□□□ -1.15
NIPBL-202ENST00000448238 IGHV4-39P01824 125 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 LPAL2Q16609 132 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 MRGPRX3Q96LB0 322 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 KIR3DX1Q9H7L2 352 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 PLPP2O43688 288 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 NEU1Q99519 415 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 QTRT1Q9BXR0 403 aaKnown RBP7.87□□□□□ -1.15
NIPBL-202ENST00000448238 IL23AQ9NPF7 189 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 PRRC2AP48634 2157 aaKnown RBP7.87□□□□□ -1.15
NIPBL-202ENST00000448238 CEACAM18A8MTB9 384 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 DEFB108AA8MXU0 73 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 EPPINO95925 133 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 SRIP30626 198 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 PIANPQ8IYJ0 282 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 NUDT8Q8WV74 236 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 PGLYRP4Q96LB8 373 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 WDFY2Q96P53 400 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 PRSS27Q9BQR3 290 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 SEPSECSQ9HD40 501 aaKnown RBP7.87□□□□□ -1.15
NIPBL-202ENST00000448238 LRP12Q9Y561 859 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 STARD6P59095 220 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 Q6AWC8 147 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 ZNF818PQ6ZRF7 136 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 BCDIN3DQ7Z5W3 292 aaKnown RBP7.87□□□□□ -1.15
NIPBL-202ENST00000448238 RHOVQ96L33 236 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 TOMM7Q9P0U1 55 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 FAM106CPP0CH98 169 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 GUCA2BQ16661 112 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 GOLT1AQ6ZVE7 132 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 CYB561D1Q8N8Q1 229 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 CLEC4DQ8WXI8 215 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 SCGB3A1Q96QR1 104 aa7.87□□□□□ -1.15
NIPBL-202ENST00000448238 ODAMA1E959 279 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 SPINT1O43278 529 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 CTAG2O75638 210 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 SP9P0CG40 484 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 OTPQ5XKR4 325 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 BIVMQ86UB2 503 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 LAMTOR3Q9UHA4 124 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 B9D1Q9UPM9 204 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 SLIT2O94813 1529 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 SPATA46Q5T0L3 261 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 NT5CQ8TCD5 201 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 SARGQ9BW04 601 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 PPRC1Q5VV67 1664 aaKnown RBP7.86□□□□□ -1.15
NIPBL-202ENST00000448238 SBK3P0C264 359 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 SPINK9Q5DT21 86 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 C9orf153Q5TBE3 101 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 HAPLN4Q86UW8 402 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 HMGCLL1Q8TB92 370 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 C9orf172C9J069 976 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 PSMB5P28074 263 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 CEACAM16Q2WEN9 425 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 M0R2P5 195 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 CADM4Q8NFZ8 388 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 OR2H1Q9GZK4 316 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 GLRX2Q9NS18 164 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 SIT1Q9Y3P8 196 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 TRAV17A0A0B4J275 112 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 CTU1Q7Z7A3 348 aaKnown RBP7.86□□□□□ -1.15
NIPBL-202ENST00000448238 RFESDQ8TAC1 157 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 KCNS1Q96KK3 526 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 DNAJC4Q9NNZ3 241 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 RBPJLQ9UBG7 517 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 FAM74A4Q5TZK3 123 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 TET1Q8NFU7 2136 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 PTP4A1Q93096 173 aa7.86□□□□□ -1.15
NIPBL-202ENST00000448238 FOXB1Q99853 325 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms