RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 NDUFA13Q9P0J0 144 aa8.68□□□□□ -1.02
NPIPB3-202ENST00000448012 KIAA1456Q9P272 454 aa8.68□□□□□ -1.02
NPIPB3-202ENST00000448012 LINC00527Q9UJ94 153 aa8.68□□□□□ -1.02
NPIPB3-202ENST00000448012 TRRAPQ9Y4A5 3859 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 SMIM31A0A1B0GVY4 71 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 TRIM64CA6NLI5 447 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 SLC31A2O15432 143 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 HSPA12AO43301 675 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 YPEL1O60688 119 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 UCHL1P09936 223 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 PPP1CCP36873 323 aaKnown RBP8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 GP2P55259 537 aaKnown RBP8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 MLLT11Q13015 90 aaPredicted RBP8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 INSL4Q14641 139 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 KIAA2026Q5HYC2 2103 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 FAM27D1Q5T7N8 215 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 FOXB2Q5VYV0 432 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 SIGIRRQ6IA17 410 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 OR10K2Q6IF99 312 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 C10orf99Q6UWK7 81 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 OR2W3Q7Z3T1 314 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 C6orf201Q7Z4U5 140 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 LYPD6Q86Y78 171 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 ZNF695Q8IW36 515 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 ZNF439Q8NDP4 499 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 OR52L2PQ8NGH6 319 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 MRPL30Q8TCC3 161 aaKnown RBP8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 YPEL2Q96QA6 119 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 FAAP24Q9BTP7 215 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 ACOT13Q9NPJ3 140 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 PIPOXQ9P0Z9 390 aa8.67□□□□□ -1.02
NPIPB3-202ENST00000448012 PDCD5O14737 125 aa8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 SLC22A1O15245 554 aa8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 ELANEP08246 267 aa8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 CALRP27797 417 aaKnown RBP8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 MYCNOSP40205 109 aa8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 RAB25P57735 213 aa8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 LSAMPQ13449 338 aa8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 FOXE3Q13461 319 aa8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 DCTN2Q13561 401 aaKnown RBP8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 TPBGQ13641 420 aa8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 GNMTQ14749 295 aa8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 P2RY14Q15391 338 aa8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 LY6G6FQ5SQ64 297 aa8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 TMEM65Q6PI78 240 aa8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 PRSS48Q7RTY5 328 aa8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 Q8N6K4 173 aa8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 Q8N9W7 124 aa8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 EDARADDQ8WWZ3 215 aa8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 SULT4A1Q9BR01 284 aa8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 TM2D1Q9BX74 207 aa8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 GHITMQ9H3K2 345 aa8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 DUSP21Q9H596 190 aa8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 VCX3AQ9NNX9 186 aa8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 ZNF107Q9UII5 783 aaPredicted RBP8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 LSM2Q9Y333 95 aaKnown RBP8.66□□□□□ -1.02
NPIPB3-202ENST00000448012 TMEM14DPA8MWL7 114 aa8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 SLC17A2O00624 439 aa8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 RAB29O14966 203 aa8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 TFAP2AP05549 437 aa8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 CPEP16870 476 aa8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 MYL9P24844 172 aa8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 THBS3P49746 956 aa8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 ZNF134P52741 427 aa8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 RPS25P62851 125 aaKnown RBP8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 IRF3Q14653 427 aa8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 PLGLAQ15195 96 aa8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 HMGN3Q15651 99 aa8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 FAM53AQ6NSI3 398 aaPredicted RBP8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 FAM71F2Q6NXP2 309 aa8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 ZNF773Q6PK81 442 aa8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 C8orf86Q6ZUL3 223 aa8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 OR56B1Q8NGI3 324 aa8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 OR8U1Q8NH10 309 aa8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 MGLLQ99685 303 aa8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 CHCHD6Q9BRQ6 235 aa8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 C12orf4Q9NQ89 552 aa8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 AURKAIP1Q9NWT8 199 aaPredicted RBP8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 AK6Q9Y3D8 172 aaKnown RBP8.65□□□□□ -1.02
NPIPB3-202ENST00000448012 NOTCH1P46531 2555 aa8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 ZNF736B4DX44 427 aaPredicted RBP8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 H7C2Y5 167 aa8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 CCL24O00175 119 aa8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 GSTP1P09211 210 aaKnown RBP8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 SLC2A2P11168 524 aaPredicted RBP8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 ZBTB25P24278 435 aa8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 CRHBPP24387 322 aa8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 GADD45AP24522 165 aa8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 MC5RP33032 325 aa8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 ALDH3B2P48448 385 aa8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 ACTBP60709 375 aa8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 DEFB121Q5J5C9 76 aa8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 Q6ZPA2 131 aa8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 ZNF367Q7RTV3 350 aa8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 MRPL41Q8IXM3 137 aaKnown RBP8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 SVOPQ8N4V2 548 aa8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 LINC00482Q8N8I6 264 aa8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 OR5M8Q8NGP6 311 aa8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 CMSS1Q9BQ75 279 aaKnown RBP8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 NICN1Q9BSH3 213 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms