RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 FER1L5A0AVI2 2057 aa16.44■□□□□ 0.22
HMGA1-205ENST00000447654 ADAM20O43506 726 aa16.44■□□□□ 0.22
HMGA1-205ENST00000447654 SLC25A6P12236 298 aa16.44■□□□□ 0.22
HMGA1-205ENST00000447654 CD33P20138 364 aa16.44■□□□□ 0.22
HMGA1-205ENST00000447654 LRRC75BQ2VPJ9 315 aa16.44■□□□□ 0.22
HMGA1-205ENST00000447654 LDLRAD2Q5SZI1 272 aa16.44■□□□□ 0.22
HMGA1-205ENST00000447654 CRIP3Q6Q6R5 217 aa16.44■□□□□ 0.22
HMGA1-205ENST00000447654 C1QL2Q7Z5L3 287 aa16.44■□□□□ 0.22
HMGA1-205ENST00000447654 OR8B12Q8NGG6 310 aa16.44■□□□□ 0.22
HMGA1-205ENST00000447654 NEIL1Q96FI4 390 aaPredicted RBP16.44■□□□□ 0.22
HMGA1-205ENST00000447654 SH3BGRL2Q9UJC5 107 aa16.44■□□□□ 0.22
HMGA1-205ENST00000447654 SAA2-SAA4A0A096LPE2 208 aa16.44■□□□□ 0.22
HMGA1-205ENST00000447654 UTS2O95399 124 aa16.44■□□□□ 0.22
HMGA1-205ENST00000447654 GP1BBP13224 206 aa16.44■□□□□ 0.22
HMGA1-205ENST00000447654 LHFPL4Q7Z7J7 247 aa16.44■□□□□ 0.22
HMGA1-205ENST00000447654 MYPOPQ86VE0 399 aaPredicted RBP16.44■□□□□ 0.22
HMGA1-205ENST00000447654 MCEMP1Q8IX19 187 aa16.44■□□□□ 0.22
HMGA1-205ENST00000447654 CADM4Q8NFZ8 388 aa16.44■□□□□ 0.22
HMGA1-205ENST00000447654 C11orf40Q8WZ69 217 aa16.44■□□□□ 0.22
HMGA1-205ENST00000447654 LOXL4Q96JB6 756 aa16.44■□□□□ 0.22
HMGA1-205ENST00000447654 KLHDC3Q9BQ90 382 aa16.44■□□□□ 0.22
HMGA1-205ENST00000447654 PGCP20142 388 aa16.43■□□□□ 0.22
HMGA1-205ENST00000447654 OR11L1Q8NGX0 322 aa16.43■□□□□ 0.22
HMGA1-205ENST00000447654 SPSB1Q96BD6 273 aa16.43■□□□□ 0.22
HMGA1-205ENST00000447654 RSG1Q9BU20 258 aa16.43■□□□□ 0.22
HMGA1-205ENST00000447654 VSIRQ9H7M9 311 aa16.43■□□□□ 0.22
HMGA1-205ENST00000447654 ALPK2Q86TB3 2170 aa16.43■□□□□ 0.22
HMGA1-205ENST00000447654 NPIPA5E9PKD4 350 aa16.43■□□□□ 0.22
HMGA1-205ENST00000447654 ZNF253O75346 499 aa16.43■□□□□ 0.22
HMGA1-205ENST00000447654 WNT2P09544 360 aa16.43■□□□□ 0.22
HMGA1-205ENST00000447654 LRRC10Q5BKY1 277 aa16.43■□□□□ 0.22
HMGA1-205ENST00000447654 UEVLDQ8IX04 471 aa16.43■□□□□ 0.22
HMGA1-205ENST00000447654 OR5P3Q8WZ94 311 aa16.43■□□□□ 0.22
HMGA1-205ENST00000447654 HDHD3Q9BSH5 251 aaPredicted RBP16.43■□□□□ 0.22
HMGA1-205ENST00000447654 KLHL13Q9P2N7 655 aa16.43■□□□□ 0.22
HMGA1-205ENST00000447654 FBXL7Q9UJT9 491 aa16.43■□□□□ 0.22
HMGA1-205ENST00000447654 NPIPA1Q9UND3 350 aa16.43■□□□□ 0.22
HMGA1-205ENST00000447654 VSTM2BA6NLU5 285 aa16.42■□□□□ 0.22
HMGA1-205ENST00000447654 ZNF814B7Z6K7 855 aa16.42■□□□□ 0.22
HMGA1-205ENST00000447654 SLC33A1O00400 549 aaPredicted RBP16.42■□□□□ 0.22
HMGA1-205ENST00000447654 TOX4O94842 621 aa16.42■□□□□ 0.22
HMGA1-205ENST00000447654 GPX1P07203 203 aa16.42■□□□□ 0.22
HMGA1-205ENST00000447654 PET117Q6UWS5 81 aa16.42■□□□□ 0.22
HMGA1-205ENST00000447654 CALHM1Q8IU99 346 aa16.42■□□□□ 0.22
HMGA1-205ENST00000447654 SLC25A45Q8N413 288 aa16.42■□□□□ 0.22
HMGA1-205ENST00000447654 PP6455Q8WZ26 134 aa16.42■□□□□ 0.22
HMGA1-205ENST00000447654 CLN8Q9UBY8 286 aa16.42■□□□□ 0.22
HMGA1-205ENST00000447654 A0A1W2PRS3 328 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 IGLC7A0M8Q6 106 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 C17orf105B2RV13 164 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 NUDT14O95848 222 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 MSR1P21757 451 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 FOXL2P58012 376 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 ZNF121P58317 390 aaPredicted RBP16.41■□□□□ 0.22
HMGA1-205ENST00000447654 VAMP3Q15836 100 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 TCF24Q7RTU0 167 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 WDR5BQ86VZ2 330 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 PSMF1Q92530 271 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 C10orf35Q96D05 121 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 FAM71F1Q96KD3 344 aaPredicted RBP16.41■□□□□ 0.22
HMGA1-205ENST00000447654 PCNX3Q9H6A9 2034 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 CACNA1EQ15878 2313 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 TRBV9A0A0B4J1U6 114 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 C17orf51A8MQB3 221 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 TMEM150CB9EJG8 249 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 GLI4P10075 376 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 HBG1P69891 147 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 HBG2P69892 147 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 C1orf185Q5T7R7 199 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 PRR27Q6MZM9 219 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 C16orf54Q6UWD8 224 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 BAGE3Q86Y29 109 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 BAGE2Q86Y30 109 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 ZNF525Q8N782 197 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 OR4F5Q8NH21 305 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 ZNF721Q8TF20 911 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 OR4F4Q96R69 305 aa16.41■□□□□ 0.22
HMGA1-205ENST00000447654 IGHV1OR21-1A0A087WYE8 117 aa16.4■□□□□ 0.22
HMGA1-205ENST00000447654 TMED7-TICAM2A0A0A6YYA0 188 aa16.4■□□□□ 0.22
HMGA1-205ENST00000447654 CTXND1A0A1B0GTU2 59 aa16.4■□□□□ 0.22
HMGA1-205ENST00000447654 CNOT4O95628 575 aaKnown RBP16.4■□□□□ 0.22
HMGA1-205ENST00000447654 GABRA2P47869 451 aa16.4■□□□□ 0.22
HMGA1-205ENST00000447654 FFAR4Q5NUL3 377 aa16.4■□□□□ 0.22
HMGA1-205ENST00000447654 PNO1Q9NRX1 252 aaKnown RBP16.4■□□□□ 0.22
HMGA1-205ENST00000447654 IL19Q9UHD0 177 aa16.4■□□□□ 0.22
HMGA1-205ENST00000447654 FAHP16930 419 aa16.4■□□□□ 0.22
HMGA1-205ENST00000447654 HINT1P49773 126 aaPredicted RBP16.4■□□□□ 0.22
HMGA1-205ENST00000447654 PMCHL1Q16048 86 aa16.4■□□□□ 0.22
HMGA1-205ENST00000447654 ASCL4Q6XD76 172 aa16.4■□□□□ 0.22
HMGA1-205ENST00000447654 OR1L3Q8NH93 324 aa16.4■□□□□ 0.22
HMGA1-205ENST00000447654 RTN4RQ9BZR6 473 aa16.4■□□□□ 0.22
HMGA1-205ENST00000447654 A0A1W2PNV4 684 aa16.39■□□□□ 0.21
HMGA1-205ENST00000447654 A0A1W2PQD3 144 aa16.39■□□□□ 0.21
HMGA1-205ENST00000447654 GRIFINA4D1Z8 144 aa16.39■□□□□ 0.21
HMGA1-205ENST00000447654 H0YIG0 161 aa16.39■□□□□ 0.21
HMGA1-205ENST00000447654 J3QR06 171 aa16.39■□□□□ 0.21
HMGA1-205ENST00000447654 KRTDAPP60985 99 aa16.39■□□□□ 0.21
HMGA1-205ENST00000447654 SNAI3Q3KNW1 292 aa16.39■□□□□ 0.21
HMGA1-205ENST00000447654 SPIN3Q5JUX0 258 aa16.39■□□□□ 0.21
HMGA1-205ENST00000447654 ZIC4Q8N9L1 334 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms