RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 OR4C12Q96R67 309 aa7.39□□□□□ -1.23
MCF2L2-203ENST00000447025 CHST6Q9GZX3 395 aa7.39□□□□□ -1.23
MCF2L2-203ENST00000447025 TUBB1Q9H4B7 451 aa7.39□□□□□ -1.23
MCF2L2-203ENST00000447025 RHOJQ9H4E5 214 aa7.39□□□□□ -1.23
MCF2L2-203ENST00000447025 MANBALQ9NQG1 85 aa7.39□□□□□ -1.23
MCF2L2-203ENST00000447025 RLIMQ9NVW2 624 aa7.39□□□□□ -1.23
MCF2L2-203ENST00000447025 HIGD1AQ9Y241 93 aa7.39□□□□□ -1.23
MCF2L2-203ENST00000447025 LAMA3Q16787 3333 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 DSPPQ9NZW4 1301 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 POLR2AP24928 1970 aaKnown RBP7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 TRGV10A0A0A0MS01 117 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 REG1AP05451 166 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 MALP21145 153 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 EMP1P54849 157 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 FUT5Q11128 374 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 CMTM4Q8IZR5 234 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 RBMXL3Q8N7X1 1067 aaKnown RBP7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 CYB561D1Q8N8Q1 229 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 TMEM54Q969K7 222 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 ZG16BQ96DA0 208 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 SLC35A4Q96G79 324 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 RARRES2Q99969 163 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 TM2D1Q9BX74 207 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 FAM124BQ9H5Z6 455 aaPredicted RBP7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 HRASLS2Q9NWW9 162 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 SPANXCQ9NY87 97 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 EHFQ9NZC4 300 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 KLHDC2Q9Y2U9 406 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 NOP16Q9Y3C1 178 aaKnown RBP7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 SOX21Q9Y651 276 aaPredicted RBP7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 TRAV9-2A0A087WT02 112 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 TRBV5-3A0A0A0MS03 114 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 ARRDC5A6NEK1 342 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 LINC00694P0DN24 101 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 NPPBP16860 134 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 SRD5A1P18405 259 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 ORM2P19652 201 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 COL8A1P27658 744 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 NDUFV3P56181 108 aaKnown RBP7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 RAB10P61026 200 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 RPL27P61353 136 aaKnown RBP7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 DLX2Q07687 328 aaPredicted RBP7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 MYBPHQ13203 477 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 INSL4Q14641 139 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 ZNF146Q15072 292 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 IGFBP7Q16270 282 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 MEIG1Q5JSS6 88 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 OR4N5Q8IXE1 308 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 MSRB3Q8IXL7 192 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 OR4C16Q8NGL9 310 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 OR10AG1Q8NH19 301 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 NDC1Q9BTX1 674 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 PRTFDC1Q9NRG1 225 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 SH2B3Q9UQQ2 575 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 INSIG2Q9Y5U4 225 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 SPCS1Q9Y6A9 102 aa7.38□□□□□ -1.23
MCF2L2-203ENST00000447025 TNFSF12O43508 249 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 ZG16O60844 167 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 KBTBD11O94819 623 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 EML2O95834 649 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 CA1P00915 261 aaPredicted RBP7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 IGHA1P01876 353 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 HLA-DRB1P01911 266 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 CSN3P07498 182 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 PRSS56P0CW18 603 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 LIMS3P0CW19 117 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 LIMS4P0CW20 117 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 ATP1B2P14415 290 aaPredicted RBP7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 WDR5P61964 334 aaKnown RBP7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 CD226Q15762 336 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 ACSF3Q4G176 576 aaPredicted RBP7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 ZNF678Q5SXM1 525 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 FNDC7Q5VTL7 733 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 PIP4P1Q86T03 277 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 C8orf44Q96CB5 159 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 ZNF488Q96MN9 340 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 SLC25A37Q9NYZ2 338 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 ABT1Q9ULW3 272 aaKnown RBP7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 LOC107984640A0A0U1RRK4 108 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 DPRXA6NFQ7 191 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 F8W1H4 67 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 RHODO00212 210 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 TIMP1P01033 207 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 CRYAAP02489 173 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 LINC00032P0C843 101 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 KRTDAPP60985 99 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 SLC35B1P78383 322 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 TNFAIP6P98066 277 aaPredicted RBP7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 PRR30Q53SZ7 412 aaPredicted RBP7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 C4orf48Q5BLP8 95 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 ZNF506Q5JVG8 444 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 SHISA6Q6ZSJ9 500 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 SYNPRQ8TBG9 265 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 S100A16Q96FQ6 103 aaKnown RBP7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 ZC2HC1AQ96GY0 325 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 IDI2-AS1Q9NZ38 188 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 KCNS2Q9ULS6 477 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 MED31Q9Y3C7 131 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 IER3IP1Q9Y5U9 82 aa7.37□□□□□ -1.23
MCF2L2-203ENST00000447025 C17orf112F2Z3M2 114 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms