RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 PMP22Q01453 160 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 ZNF525Q8N782 197 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 MISP3Q96FF7 219 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 GPR87Q9BY21 358 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 KIAA1549Q9HCM3 1950 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 MAP1LC3B2A6NCE7 125 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 ZNF737O75373 536 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 IGLV2-14P01704 120 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 APLNRP35414 380 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 MDH2P40926 338 aaKnown RBP12.07□□□□□ -0.48
ERCC3-203ENST00000445889 CEBPDP49716 269 aaPredicted RBP12.07□□□□□ -0.48
ERCC3-203ENST00000445889 P2RY6Q15077 328 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 C16orf82Q7Z2V1 217 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 REC114Q7Z4M0 266 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 RPP25LQ8N5L8 163 aaKnown RBP12.07□□□□□ -0.48
ERCC3-203ENST00000445889 OR10A7Q8NGE5 316 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 LHX4Q969G2 390 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 SPSB4Q96A44 273 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 MAP1LC3BQ9GZQ8 125 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 C12orf49Q9H741 205 aa12.07□□□□□ -0.48
ERCC3-203ENST00000445889 UBE2ZQ9H832 354 aaPredicted RBP12.07□□□□□ -0.48
ERCC3-203ENST00000445889 MED12LQ86YW9 2145 aa12.06□□□□□ -0.48
ERCC3-203ENST00000445889 KRASP01116 189 aa12.06□□□□□ -0.48
ERCC3-203ENST00000445889 GZMHP20718 246 aa12.06□□□□□ -0.48
ERCC3-203ENST00000445889 COL8A2P25067 703 aa12.06□□□□□ -0.48
ERCC3-203ENST00000445889 TMEM37Q8WXS4 190 aa12.06□□□□□ -0.48
ERCC3-203ENST00000445889 DLL3Q9NYJ7 618 aa12.06□□□□□ -0.48
ERCC3-203ENST00000445889 ZNF391Q9UJN7 358 aa12.06□□□□□ -0.48
ERCC3-203ENST00000445889 TCFL5Q9UL49 500 aa12.06□□□□□ -0.48
ERCC3-203ENST00000445889 A0A1W2PPQ1 181 aa12.06□□□□□ -0.48
ERCC3-203ENST00000445889 CLDN1O95832 211 aa12.06□□□□□ -0.48
ERCC3-203ENST00000445889 RND2P52198 227 aa12.06□□□□□ -0.48
ERCC3-203ENST00000445889 PNRC1Q12796 327 aaPredicted RBP12.06□□□□□ -0.48
ERCC3-203ENST00000445889 LPAL2Q16609 132 aa12.06□□□□□ -0.48
ERCC3-203ENST00000445889 NCR3LG1Q68D85 454 aa12.06□□□□□ -0.48
ERCC3-203ENST00000445889 ZNF808Q8N4W9 903 aaPredicted RBP12.06□□□□□ -0.48
ERCC3-203ENST00000445889 ABHD14BQ96IU4 210 aa12.06□□□□□ -0.48
ERCC3-203ENST00000445889 PRDM14Q9GZV8 571 aa12.06□□□□□ -0.48
ERCC3-203ENST00000445889 SLC39A9Q9NUM3 307 aa12.06□□□□□ -0.48
ERCC3-203ENST00000445889 PITPNC1Q9UKF7 332 aa12.06□□□□□ -0.48
ERCC3-203ENST00000445889 RAMP3O60896 148 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 AMBPP02760 352 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 GZMBP10144 247 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 SELLP14151 372 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 S100GP29377 79 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 IL11RAQ14626 422 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 ZNF585BQ52M93 769 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 ABLIM2Q6H8Q1 611 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 ZNF66Q6ZN08 573 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 TMPRSS7Q7RTY8 843 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.05□□□□□ -0.48
ERCC3-203ENST00000445889 OR10V1Q8NGI7 309 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 MAFAQ8NHW3 353 aaPredicted RBP12.05□□□□□ -0.48
ERCC3-203ENST00000445889 RAB40CQ96S21 281 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 VAX2Q9UIW0 290 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 TRAV1-1A0A0B4J248 108 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 DEGS1O15121 323 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 OPN1MWP04001 364 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 OPN1MW2P0DN77 364 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 OPN1MW3P0DN78 364 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 CD81P60033 236 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 ZNF816Q0VGE8 651 aaPredicted RBP12.05□□□□□ -0.48
ERCC3-203ENST00000445889 OR8G1Q15617 311 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 DPPA3Q6W0C5 159 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 COLCA1Q6ZS62 124 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 PLPPR2Q96GM1 343 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 PCGF1Q9BSM1 259 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 TRAPPC2LQ9UL33 140 aa12.05□□□□□ -0.48
ERCC3-203ENST00000445889 DUXBA0A1W2PPF3 345 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 XKRY2A2RUG3 117 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 SOX15O60248 233 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 FAM58AQ8N1B3 248 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 ZNF664Q8N3J9 261 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 KCNE4Q8WWG9 221 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 OR5P3Q8WZ94 311 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 CLN8Q9UBY8 286 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 PRSS50Q9UI38 385 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 TRBV24-1A0A075B6N3 115 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 CYTIPO60759 359 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 CEACAM6P40199 344 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 CYB561P49447 251 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 IDH3GP51553 393 aaPredicted RBP12.04□□□□□ -0.48
ERCC3-203ENST00000445889 RIPPLY2Q5TAB7 128 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 PPP1R32Q7Z5V6 425 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 CXorf67Q86X51 503 aaPredicted RBP12.04□□□□□ -0.48
ERCC3-203ENST00000445889 SMG1Q96Q15 3661 aaKnown RBP12.04□□□□□ -0.48
ERCC3-203ENST00000445889 LAMA5O15230 3695 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 G6PCP35575 357 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 COL19A1Q14993 1142 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 MRGPRGQ86SM5 289 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 LRP11Q86VZ4 500 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 TMEM183AQ8IXX5 376 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 OR10G4Q8NGN3 311 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 TMEM242Q9NWH2 141 aa12.04□□□□□ -0.48
ERCC3-203ENST00000445889 IFNA10P01566 189 aa12.03□□□□□ -0.48
ERCC3-203ENST00000445889 CTXN2P0C2S0 81 aa12.03□□□□□ -0.48
ERCC3-203ENST00000445889 TMEM241Q24JQ0 296 aa12.03□□□□□ -0.48
ERCC3-203ENST00000445889 TCEAL6Q6IPX3 200 aa12.03□□□□□ -0.48
ERCC3-203ENST00000445889 ACSM6Q6P461 480 aa12.03□□□□□ -0.48
ERCC3-203ENST00000445889 Q6ZS49 121 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms