RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 PSG11Q9UQ72 335 aa14.02□□□□□ -0.17
LIME1-202ENST00000444951 ZNF736B4DX44 427 aaPredicted RBP14.01□□□□□ -0.17
LIME1-202ENST00000444951 CD3DP04234 171 aa14.01□□□□□ -0.17
LIME1-202ENST00000444951 ARG1P05089 322 aa14.01□□□□□ -0.17
LIME1-202ENST00000444951 NAT1P18440 290 aa14.01□□□□□ -0.17
LIME1-202ENST00000444951 NFYAP23511 347 aaPredicted RBP14.01□□□□□ -0.17
LIME1-202ENST00000444951 HRH1P35367 487 aa14.01□□□□□ -0.17
LIME1-202ENST00000444951 INPP1P49441 399 aa14.01□□□□□ -0.17
LIME1-202ENST00000444951 CDK10Q15131 360 aa14.01□□□□□ -0.17
LIME1-202ENST00000444951 BAK1Q16611 211 aa14.01□□□□□ -0.17
LIME1-202ENST00000444951 KLF17Q5JT82 389 aaPredicted RBP14.01□□□□□ -0.17
LIME1-202ENST00000444951 TRIQKQ629K1 86 aa14.01□□□□□ -0.17
LIME1-202ENST00000444951 STEAP3Q658P3 488 aa14.01□□□□□ -0.17
LIME1-202ENST00000444951 BRD3OSQ6XYD6 125 aa14.01□□□□□ -0.17
LIME1-202ENST00000444951 GDPD1Q8N9F7 314 aa14.01□□□□□ -0.17
LIME1-202ENST00000444951 OR52M1Q8NGK5 317 aa14.01□□□□□ -0.17
LIME1-202ENST00000444951 CABLES2Q9BTV7 478 aa14.01□□□□□ -0.17
LIME1-202ENST00000444951 UNKLQ9H9P5 680 aaKnown RBP14.01□□□□□ -0.17
LIME1-202ENST00000444951 TRBV6-7A0A0A0MS04 114 aa14□□□□□ -0.17
LIME1-202ENST00000444951 IGHV1-69DA0A0B4J2H0 117 aa14□□□□□ -0.17
LIME1-202ENST00000444951 LINC00854A0A1B0GVQ3 168 aa14□□□□□ -0.17
LIME1-202ENST00000444951 SLC31A2O15432 143 aa14□□□□□ -0.17
LIME1-202ENST00000444951 RGS11O94810 467 aa14□□□□□ -0.17
LIME1-202ENST00000444951 IGHV1-69P01742 117 aa14□□□□□ -0.17
LIME1-202ENST00000444951 CSF1P09603 554 aa14□□□□□ -0.17
LIME1-202ENST00000444951 CTXN2P0C2S0 81 aa14□□□□□ -0.17
LIME1-202ENST00000444951 OR5H8P0DN80 308 aa14□□□□□ -0.17
LIME1-202ENST00000444951 TAS2R46P59540 309 aa14□□□□□ -0.17
LIME1-202ENST00000444951 LSAMPQ13449 338 aa14□□□□□ -0.17
LIME1-202ENST00000444951 TMEM30BQ3MIR4 351 aa14□□□□□ -0.17
LIME1-202ENST00000444951 MORN2Q502X0 79 aa14□□□□□ -0.17
LIME1-202ENST00000444951 ZNF57Q68EA5 555 aaPredicted RBP14□□□□□ -0.17
LIME1-202ENST00000444951 NANPQ8TBE9 248 aa14□□□□□ -0.17
LIME1-202ENST00000444951 SDHCQ99643 169 aaPredicted RBP14□□□□□ -0.17
LIME1-202ENST00000444951 WDR12Q9GZL7 423 aaKnown RBP14□□□□□ -0.17
LIME1-202ENST00000444951 OCEL1Q9H607 264 aa14□□□□□ -0.17
LIME1-202ENST00000444951 RDH8Q9NYR8 311 aa14□□□□□ -0.17
LIME1-202ENST00000444951 RBMX2Q9Y388 322 aaKnown RBP14□□□□□ -0.17
LIME1-202ENST00000444951 UBE2E1P51965 193 aa13.99□□□□□ -0.17
LIME1-202ENST00000444951 PRRX1P54821 245 aa13.99□□□□□ -0.17
LIME1-202ENST00000444951 LGALS4P56470 323 aa13.99□□□□□ -0.17
LIME1-202ENST00000444951 TAS2R19P59542 299 aa13.99□□□□□ -0.17
LIME1-202ENST00000444951 SSBP1Q04837 148 aaKnown RBP13.99□□□□□ -0.17
LIME1-202ENST00000444951 RNASE10Q5GAN6 216 aaKnown RBP13.99□□□□□ -0.17
LIME1-202ENST00000444951 FAAP20Q6NZ36 180 aa13.99□□□□□ -0.17
LIME1-202ENST00000444951 TMEM229BQ8NBD8 167 aa13.99□□□□□ -0.17
LIME1-202ENST00000444951 OR2AK2Q8NG84 335 aa13.99□□□□□ -0.17
LIME1-202ENST00000444951 OR9G1Q8NH87 305 aa13.99□□□□□ -0.17
LIME1-202ENST00000444951 C22orf15Q8WYQ4 148 aa13.99□□□□□ -0.17
LIME1-202ENST00000444951 TRIM63Q969Q1 353 aa13.99□□□□□ -0.17
LIME1-202ENST00000444951 TSC22D3Q99576 134 aa13.99□□□□□ -0.17
LIME1-202ENST00000444951 TINAGL1Q9GZM7 467 aaPredicted RBP13.99□□□□□ -0.17
LIME1-202ENST00000444951 RBM7Q9Y580 266 aaKnown RBP13.99□□□□□ -0.17
LIME1-202ENST00000444951 SOX21Q9Y651 276 aaPredicted RBP13.99□□□□□ -0.17
LIME1-202ENST00000444951 A0A087X0M5 115 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 A0A1B0GX30 115 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 J3QR06 171 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 NPFFO15130 113 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 ST8SIA5O15466 376 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 YPEL1O60688 119 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 RAB3DO95716 219 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 IFNA6P05013 189 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 CD34P28906 385 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 FCGR2CP31995 323 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 ZNF134P52741 427 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 PPP5CP53041 499 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 TSPAN5P62079 268 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 CT45A1Q5HYN5 189 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 STEAP1BQ6NZ63 245 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 TOMM5Q8N4H5 51 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 OR11H6Q8NGC7 330 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 OR4D10Q8NGI6 311 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 OR10X1Q8NGY0 326 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 CT45A3Q8NHU0 189 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 YPEL2Q96QA6 119 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 C11orf54Q9H0W9 315 aaPredicted RBP13.98□□□□□ -0.17
LIME1-202ENST00000444951 TAS2R8Q9NYW2 309 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 NUP50Q9UKX7 468 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 RNF150Q9ULK6 438 aa13.98□□□□□ -0.17
LIME1-202ENST00000444951 ANKRD20A5PA0PJZ0 165 aa13.97□□□□□ -0.17
LIME1-202ENST00000444951 OR8U9P0C7N5 309 aa13.97□□□□□ -0.17
LIME1-202ENST00000444951 AKAIN1P0CW23 69 aa13.97□□□□□ -0.17
LIME1-202ENST00000444951 IL7P13232 177 aa13.97□□□□□ -0.17
LIME1-202ENST00000444951 SAA4P35542 130 aa13.97□□□□□ -0.17
LIME1-202ENST00000444951 FXYD4P59646 89 aa13.97□□□□□ -0.17
LIME1-202ENST00000444951 ACTBL2Q562R1 376 aa13.97□□□□□ -0.17
LIME1-202ENST00000444951 ZNF626Q68DY1 528 aa13.97□□□□□ -0.17
LIME1-202ENST00000444951 LHFPL4Q7Z7J7 247 aa13.97□□□□□ -0.17
LIME1-202ENST00000444951 H1FOOQ8IZA3 346 aaPredicted RBP13.97□□□□□ -0.17
LIME1-202ENST00000444951 ZNF439Q8NDP4 499 aa13.97□□□□□ -0.17
LIME1-202ENST00000444951 OR8U1Q8NH10 309 aa13.97□□□□□ -0.17
LIME1-202ENST00000444951 ZNF596Q8TC21 504 aa13.97□□□□□ -0.17
LIME1-202ENST00000444951 ABHD14AQ9BUJ0 271 aa13.97□□□□□ -0.17
LIME1-202ENST00000444951 MS4A7Q9GZW8 240 aaPredicted RBP13.97□□□□□ -0.17
LIME1-202ENST00000444951 MMP28Q9H239 520 aa13.97□□□□□ -0.17
LIME1-202ENST00000444951 ABCB10Q9NRK6 738 aa13.97□□□□□ -0.17
LIME1-202ENST00000444951 ODF3BA8MYP8 253 aa13.96□□□□□ -0.17
LIME1-202ENST00000444951 AMY2AP04746 511 aa13.96□□□□□ -0.17
LIME1-202ENST00000444951 EPHA1P21709 976 aa13.96□□□□□ -0.17
LIME1-202ENST00000444951 AADACP22760 399 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms