RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 OR8U8P0C7N1 319 aa12.75□□□□□ -0.37
CTDSP1-204ENST00000443891 RANBP1P43487 201 aa12.75□□□□□ -0.37
CTDSP1-204ENST00000443891 RAB25P57735 213 aa12.75□□□□□ -0.37
CTDSP1-204ENST00000443891 ACTBP60709 375 aa12.75□□□□□ -0.37
CTDSP1-204ENST00000443891 C1orf100Q5SVJ3 147 aa12.75□□□□□ -0.37
CTDSP1-204ENST00000443891 OGFRL1Q5TC84 451 aaPredicted RBP12.75□□□□□ -0.37
CTDSP1-204ENST00000443891 C11orf87Q6NUJ2 197 aa12.75□□□□□ -0.37
CTDSP1-204ENST00000443891 ZNF833PQ6ZTB9 187 aa12.75□□□□□ -0.37
CTDSP1-204ENST00000443891 MOB1BQ7L9L4 216 aa12.75□□□□□ -0.37
CTDSP1-204ENST00000443891 ODF3L1Q8IXM7 274 aa12.75□□□□□ -0.37
CTDSP1-204ENST00000443891 OR2AK2Q8NG84 335 aa12.75□□□□□ -0.37
CTDSP1-204ENST00000443891 KCNG3Q8TAE7 436 aa12.75□□□□□ -0.37
CTDSP1-204ENST00000443891 DUX3Q96PT4 197 aa12.75□□□□□ -0.37
CTDSP1-204ENST00000443891 NABP2Q9BQ15 211 aa12.75□□□□□ -0.37
CTDSP1-204ENST00000443891 OR51J1Q9H342 316 aa12.75□□□□□ -0.37
CTDSP1-204ENST00000443891 RIMS4Q9H426 269 aaPredicted RBP12.75□□□□□ -0.37
CTDSP1-204ENST00000443891 FKBP14Q9NWM8 211 aa12.75□□□□□ -0.37
CTDSP1-204ENST00000443891 PIPOXQ9P0Z9 390 aa12.75□□□□□ -0.37
CTDSP1-204ENST00000443891 STEAP1Q9UHE8 339 aa12.75□□□□□ -0.37
CTDSP1-204ENST00000443891 VSIG4Q9Y279 399 aa12.75□□□□□ -0.37
CTDSP1-204ENST00000443891 PNMA8CA0A1B0GUJ8 204 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 ERICH4A6NGS2 130 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 ITGB1BP1O14713 200 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 NBR2O15453 112 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 NDUFA3O95167 84 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 BPNT1O95861 308 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 IGLV1-40P01703 118 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 CD37P11049 281 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 CHATP28329 748 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 RPS27AP62979 156 aaKnown RBP12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 HMGN3Q15651 99 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 C5orf64Q2M2E5 130 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 ACSM3Q53FZ2 586 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 AHSA2Q719I0 299 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 TCTEX1D1Q8N7M0 179 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 BPIFB6Q8NFQ5 453 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 OR52L2PQ8NGH6 319 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 MND1Q9BWT6 205 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 TM2D1Q9BX74 207 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 TMEM59Q9BXS4 323 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 SCN3BQ9NY72 215 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 KIAA1456Q9P272 454 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 MGAT4AQ9UM21 535 aa12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 LSM4Q9Y4Z0 139 aaKnown RBP12.74□□□□□ -0.37
CTDSP1-204ENST00000443891 SEC14L6B5MCN3 397 aa12.73□□□□□ -0.37
CTDSP1-204ENST00000443891 I3L521 148 aa12.73□□□□□ -0.37
CTDSP1-204ENST00000443891 CASQ2O14958 399 aaPredicted RBP12.73□□□□□ -0.37
CTDSP1-204ENST00000443891 RAB29O14966 203 aa12.73□□□□□ -0.37
CTDSP1-204ENST00000443891 MC5RP33032 325 aa12.73□□□□□ -0.37
CTDSP1-204ENST00000443891 PPP1CCP36873 323 aaKnown RBP12.73□□□□□ -0.37
CTDSP1-204ENST00000443891 CRIP2P52943 208 aaPredicted RBP12.73□□□□□ -0.37
CTDSP1-204ENST00000443891 DEFB136Q30KP8 78 aa12.73□□□□□ -0.37
CTDSP1-204ENST00000443891 LAIR2Q6ISS4 152 aa12.73□□□□□ -0.37
CTDSP1-204ENST00000443891 LIN54Q6MZP7 749 aa12.73□□□□□ -0.37
CTDSP1-204ENST00000443891 ZNF491Q8N8L2 437 aa12.73□□□□□ -0.37
CTDSP1-204ENST00000443891 OR11H1Q8NG94 326 aa12.73□□□□□ -0.37
CTDSP1-204ENST00000443891 RNF5Q99942 180 aa12.73□□□□□ -0.37
CTDSP1-204ENST00000443891 MRPL20Q9BYC9 149 aaKnown RBP12.73□□□□□ -0.37
CTDSP1-204ENST00000443891 TRBV6-6A0A0A6YYG2 114 aa12.72□□□□□ -0.37
CTDSP1-204ENST00000443891 IGHV7-81A0A0B4J1V7 117 aa12.72□□□□□ -0.37
CTDSP1-204ENST00000443891 RBBP9O75884 186 aa12.72□□□□□ -0.37
CTDSP1-204ENST00000443891 VSIG8P0DPA2 414 aa12.72□□□□□ -0.37
CTDSP1-204ENST00000443891 SLC2A2P11168 524 aaPredicted RBP12.72□□□□□ -0.37
CTDSP1-204ENST00000443891 ZNF616Q08AN1 781 aa12.72□□□□□ -0.37
CTDSP1-204ENST00000443891 KIAA0141Q14154 515 aaPredicted RBP12.72□□□□□ -0.37
CTDSP1-204ENST00000443891 GNMTQ14749 295 aa12.72□□□□□ -0.37
CTDSP1-204ENST00000443891 NKAPLQ5M9Q1 402 aa12.72□□□□□ -0.37
CTDSP1-204ENST00000443891 ZNF660Q6AZW8 331 aaPredicted RBP12.72□□□□□ -0.37
CTDSP1-204ENST00000443891 ZNF880Q6PDB4 577 aa12.72□□□□□ -0.37
CTDSP1-204ENST00000443891 MINDY2Q8NBR6 621 aa12.72□□□□□ -0.37
CTDSP1-204ENST00000443891 FAM46BQ96A09 425 aa12.72□□□□□ -0.37
CTDSP1-204ENST00000443891 SCOCQ9UIL1 159 aa12.72□□□□□ -0.37
CTDSP1-204ENST00000443891 SAA2-SAA4A0A096LPE2 208 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 TRAV41A0A0B4J266 112 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 OR5H14A6NHG9 310 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 SLC22A1O15245 554 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 ATP6V0E1O15342 81 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 NAPSAO96009 420 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 CDK1P06493 297 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 GNAO1P09471 354 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 SAA2P0DJI9 122 aaPredicted RBP12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 SRMP19623 302 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 MYF6P23409 242 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 HTR2CP28335 458 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 RAB9AP51151 201 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 LUMP51884 338 aaPredicted RBP12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 TMEM267Q0VDI3 215 aaPredicted RBP12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 LRRTM1Q86UE6 522 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 ZNF429Q86V71 674 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 SVOPQ8N4V2 548 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 OR1N2Q8NGR9 330 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 EDARADDQ8WWZ3 215 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 SULT4A1Q9BR01 284 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 FAAP24Q9BTP7 215 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 ANKRD60Q9BZ19 345 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 IFI27L2Q9H2X8 130 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 SLC23A1Q9UHI7 598 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 RNF150Q9ULK6 438 aa12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 ZNF256Q9Y2P7 627 aaPredicted RBP12.71□□□□□ -0.37
CTDSP1-204ENST00000443891 TMEM14DPA8MWL7 114 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms