RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 DOCK11Q5JSL3 2073 aa12.04□□□□□ -0.48
MCF2L-218ENST00000442625 MUC3AQ02505 3323 aa12.04□□□□□ -0.48
MCF2L-218ENST00000442625 C9J4A7 227 aa12.04□□□□□ -0.48
MCF2L-218ENST00000442625 KLF7O75840 302 aaPredicted RBP12.04□□□□□ -0.48
MCF2L-218ENST00000442625 GZMHP20718 246 aa12.04□□□□□ -0.48
MCF2L-218ENST00000442625 GPM6AP51674 278 aa12.04□□□□□ -0.48
MCF2L-218ENST00000442625 RPS16P62249 146 aaKnown RBP12.04□□□□□ -0.48
MCF2L-218ENST00000442625 M1APQ8TC57 530 aa12.04□□□□□ -0.48
MCF2L-218ENST00000442625 PLK3Q9H4B4 646 aa12.04□□□□□ -0.48
MCF2L-218ENST00000442625 Q9N2K0 584 aa12.04□□□□□ -0.48
MCF2L-218ENST00000442625 MRPS17Q9Y2R5 130 aaKnown RBP12.04□□□□□ -0.48
MCF2L-218ENST00000442625 LOC102723996A0A087X1L8 192 aa12.03□□□□□ -0.48
MCF2L-218ENST00000442625 ZNF716A6NP11 495 aa12.03□□□□□ -0.48
MCF2L-218ENST00000442625 HS3ST1O14792 307 aa12.03□□□□□ -0.48
MCF2L-218ENST00000442625 PGLYRP1O75594 196 aaPredicted RBP12.03□□□□□ -0.48
MCF2L-218ENST00000442625 CYB5R3P00387 301 aaPredicted RBP12.03□□□□□ -0.48
MCF2L-218ENST00000442625 WIPI1Q5MNZ9 446 aaPredicted RBP12.03□□□□□ -0.48
MCF2L-218ENST00000442625 GATAD1Q8WUU5 269 aa12.03□□□□□ -0.48
MCF2L-218ENST00000442625 IL1F10Q8WWZ1 152 aa12.03□□□□□ -0.48
MCF2L-218ENST00000442625 RPUSD4Q96CM3 377 aaKnown RBP12.03□□□□□ -0.48
MCF2L-218ENST00000442625 RCC1LQ96I51 464 aaKnown RBP12.03□□□□□ -0.48
MCF2L-218ENST00000442625 GPR87Q9BY21 358 aa12.03□□□□□ -0.48
MCF2L-218ENST00000442625 SDF2L1Q9HCN8 221 aa12.03□□□□□ -0.48
MCF2L-218ENST00000442625 SLC35D1Q9NTN3 355 aa12.03□□□□□ -0.48
MCF2L-218ENST00000442625 LAMP3Q9UQV4 416 aa12.03□□□□□ -0.48
MCF2L-218ENST00000442625 ZNF816-ZNF321PA0A0X1KG74 233 aa12.03□□□□□ -0.48
MCF2L-218ENST00000442625 CYTIPO60759 359 aa12.03□□□□□ -0.48
MCF2L-218ENST00000442625 IFNA5P01569 189 aa12.03□□□□□ -0.48
MCF2L-218ENST00000442625 DEFA4P12838 97 aa12.03□□□□□ -0.48
MCF2L-218ENST00000442625 B3GALT5-AS1P59052 145 aa12.03□□□□□ -0.48
MCF2L-218ENST00000442625 GGNQ86UU5 652 aa12.03□□□□□ -0.48
MCF2L-218ENST00000442625 LRP11Q86VZ4 500 aa12.03□□□□□ -0.48
MCF2L-218ENST00000442625 OR8G5Q8NG78 346 aa12.03□□□□□ -0.48
MCF2L-218ENST00000442625 OR14J1Q9UGF5 321 aa12.03□□□□□ -0.48
MCF2L-218ENST00000442625 A0A096LPE4 126 aa12.02□□□□□ -0.48
MCF2L-218ENST00000442625 A0A1W2PPZ6 126 aa12.02□□□□□ -0.48
MCF2L-218ENST00000442625 CBY3A6NI87 242 aa12.02□□□□□ -0.48
MCF2L-218ENST00000442625 HBE1P02100 147 aa12.02□□□□□ -0.48
MCF2L-218ENST00000442625 UCP1P25874 307 aa12.02□□□□□ -0.48
MCF2L-218ENST00000442625 SRPXP78539 464 aa12.02□□□□□ -0.48
MCF2L-218ENST00000442625 SLAQ13239 276 aa12.02□□□□□ -0.48
MCF2L-218ENST00000442625 TESK1Q15569 626 aa12.02□□□□□ -0.48
MCF2L-218ENST00000442625 C16orf82Q7Z2V1 217 aa12.02□□□□□ -0.48
MCF2L-218ENST00000442625 HAPLN4Q86UW8 402 aa12.02□□□□□ -0.48
MCF2L-218ENST00000442625 WDR5BQ86VZ2 330 aa12.02□□□□□ -0.48
MCF2L-218ENST00000442625 SPEM1Q8N4L4 309 aa12.02□□□□□ -0.48
MCF2L-218ENST00000442625 OR10D3Q8NH80 312 aa12.02□□□□□ -0.48
MCF2L-218ENST00000442625 CPT1CQ8TCG5 803 aa12.02□□□□□ -0.48
MCF2L-218ENST00000442625 SAP25Q8TEE9 199 aa12.02□□□□□ -0.48
MCF2L-218ENST00000442625 RDH5Q92781 318 aa12.02□□□□□ -0.48
MCF2L-218ENST00000442625 SH2D2AQ9NP31 389 aa12.02□□□□□ -0.48
MCF2L-218ENST00000442625 PI4KAP42356 2102 aa12.02□□□□□ -0.49
MCF2L-218ENST00000442625 MMP7P09237 267 aaPredicted RBP12.02□□□□□ -0.49
MCF2L-218ENST00000442625 BMP5P22003 454 aa12.02□□□□□ -0.49
MCF2L-218ENST00000442625 APOBEC3AP31941 199 aaPredicted RBP12.02□□□□□ -0.49
MCF2L-218ENST00000442625 OR13D1Q8NGV5 346 aa12.02□□□□□ -0.49
MCF2L-218ENST00000442625 ZNF596Q8TC21 504 aa12.02□□□□□ -0.49
MCF2L-218ENST00000442625 TMEM37Q8WXS4 190 aa12.02□□□□□ -0.49
MCF2L-218ENST00000442625 THOC3Q96J01 351 aaKnown RBP12.02□□□□□ -0.49
MCF2L-218ENST00000442625 DUSP23Q9BVJ7 150 aa12.02□□□□□ -0.49
MCF2L-218ENST00000442625 CACNG5Q9UF02 275 aa12.02□□□□□ -0.49
MCF2L-218ENST00000442625 CEACAM1P13688 526 aa12.02□□□□□ -0.49
MCF2L-218ENST00000442625 CLDN15P56746 228 aa12.02□□□□□ -0.49
MCF2L-218ENST00000442625 SELENOVP59797 346 aa12.02□□□□□ -0.49
MCF2L-218ENST00000442625 IL24Q13007 206 aa12.02□□□□□ -0.49
MCF2L-218ENST00000442625 OR8B8Q15620 311 aa12.02□□□□□ -0.49
MCF2L-218ENST00000442625 WDR54Q9H977 334 aa12.02□□□□□ -0.49
MCF2L-218ENST00000442625 GPR35Q9HC97 309 aa12.02□□□□□ -0.49
MCF2L-218ENST00000442625 AURKAIP1Q9NWT8 199 aaPredicted RBP12.02□□□□□ -0.49
MCF2L-218ENST00000442625 IL36GQ9NZH8 169 aa12.02□□□□□ -0.49
MCF2L-218ENST00000442625 K7ESF4 209 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 IL18BPO95998 194 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 RND2P52198 227 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 UBE2G2P60604 165 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 NHLH1Q02575 133 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 BAXQ07812 192 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 SNIP1Q8TAD8 396 aaKnown RBP12.01□□□□□ -0.49
MCF2L-218ENST00000442625 SCGB1C1Q8TD33 95 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 CORO2AQ92828 525 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 HIST1H2AAQ96QV6 131 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 SMIM7Q9BQ49 75 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 PCGF1Q9BSM1 259 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 CISD1Q9NZ45 108 aaKnown RBP12.01□□□□□ -0.49
MCF2L-218ENST00000442625 ERRFI1Q9UJM3 462 aaPredicted RBP12.01□□□□□ -0.49
MCF2L-218ENST00000442625 IGHV3-64DA0A0J9YX35 117 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 GJE1A6NN92 205 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 EREGO14944 169 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 SYNGR1O43759 233 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 IGKV1D-33P01593 117 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 IGKV1-33P01594 117 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 MLF1P58340 268 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 KRTAP27-1Q3LI81 207 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 ZDHHC23Q8IYP9 409 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 MTCH1Q9NZJ7 389 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 OR1A1Q9P1Q5 309 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 PITPNC1Q9UKF7 332 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 TCFL5Q9UL49 500 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 PPP1R3CQ9UQK1 317 aa12.01□□□□□ -0.49
MCF2L-218ENST00000442625 NCKAP5O14513 1909 aa12□□□□□ -0.49
MCF2L-218ENST00000442625 A0A1B0GUS0 222 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms