RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 POPDC3Q9HBV1 291 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 RSL24D1Q9UHA3 163 aaKnown RBP3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 LSM5Q9Y4Y9 91 aaKnown RBP3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZNF780BQ9Y6R6 833 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 MBD5Q9P267 1494 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 TNS3Q68CZ2 1445 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 PCNX3Q9H6A9 2034 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 COL6A3P12111 3177 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 A0A0G2JLM5 398 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 TMEM189A5PLL7 270 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 RBMY1BA6NDE4 496 aaKnown RBP3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 RBMY1EA6NEQ0 496 aaKnown RBP3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 FABP7O15540 132 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 CRXO43186 299 aaPredicted RBP3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 MRPS14O60783 128 aaKnown RBP3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 DUSP14O95147 198 aaKnown RBP3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 FABP3P05413 133 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 RBMY1DP0C7P1 496 aaKnown RBP3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 RBMY1A1P0DJD3 496 aaKnown RBP3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 FOLR2P14207 255 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 HRH1P35367 487 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR1E2P47887 323 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 CXCL6P80162 114 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 GINS1Q14691 196 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 ACOT6Q3I5F7 207 aaPredicted RBP3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 C1orf194Q5T5A4 169 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 TBPL2Q6SJ96 375 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 H1FOOQ8IZA3 346 aaPredicted RBP3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR8I2Q8N0Y5 310 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 C6orf223Q8N319 242 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 GPD1LQ8N335 351 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR4M1Q8NGD0 313 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 FGGYQ96C11 551 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 PGLYRP3Q96LB9 341 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR52B2Q96RD2 323 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 PRO1933Q9H354 126 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 DPM3Q9P2X0 92 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 CCDC141Q6ZP82 1450 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 DCCP43146 1447 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 THSD7AQ9UPZ6 1657 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 ADGRB3O60242 1522 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 MEGF6O75095 1541 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 TRAV30A0A087WSZ9 112 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 IGHV3-35A0A0C4DH35 117 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 A0A0J9YY10 115 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 A0A1B0GX78 115 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 TMEM218A2RU14 115 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 NCBP2LA6PVI3 153 aaKnown RBP3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 TDGF1P13385 188 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 PGAM2P15259 253 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZNF708P17019 499 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 TCN2P20062 427 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZBTB25P24278 435 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 BRS3P32247 399 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 MDH2P40926 338 aaKnown RBP3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 TAS2R30P59541 319 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 RAB5BP61020 215 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 SLC25A11Q02978 314 aaKnown RBP3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 SLC25A35Q3KQZ1 300 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 VAX1Q5SQQ9 334 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 AGTRAPQ6RW13 159 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZNF571Q7Z3V5 609 aaPredicted RBP3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 PPP1R27Q86WC6 154 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR1N2Q8NGR9 330 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR5W2Q8NH69 310 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 MCFD2Q8NI22 146 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 DCUN1D4Q92564 292 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 RCN3Q96D15 328 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 AURKBQ96GD4 344 aaPredicted RBP3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 CNBD2Q96M20 576 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 IP6K3Q96PC2 410 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 TRIB3Q96RU7 358 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 HSPB9Q9BQS6 159 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 SULT4A1Q9BR01 284 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 FAAP24Q9BTP7 215 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 DOHHQ9BU89 302 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 SLC17A9Q9BYT1 436 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 SMIM3Q9BZL3 60 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 C20orf27Q9GZN8 174 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 TMEM126AQ9H061 195 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 NANOGQ9H9S0 305 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 EFCAB1Q9HAE3 211 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 PLSCR3Q9NRY6 295 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 CISHQ9NSE2 258 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 KCNIP1Q9NZI2 227 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 TMEM216Q9P0N5 145 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 PRNDQ9UKY0 176 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZNF256Q9Y2P7 627 aaPredicted RBP3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 LAMTOR2Q9Y2Q5 125 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 PLCH1Q4KWH8 1693 aa3.11□□□□□ -1.91
CDC42BPA-207ENST00000441725 SZT2Q5T011 3432 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 KIAA1551Q9HCM1 1747 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 A0A087WUU8 490 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 C1orf196B1AJZ1 125 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 COPEO14579 308 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 USF1P22415 310 aaPredicted RBP3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 RPS3P23396 243 aaKnown RBP eCLIP3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 NPY1RP25929 384 aa3.1□□□□□ -1.91
CDC42BPA-207ENST00000441725 GABRA2P47869 451 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms