RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 IGLV3-32A0A0A0MS00 114 aa17.29■□□□□ 0.36
SHOX2-203ENST00000441443 B4GALT1P15291 398 aa17.29■□□□□ 0.36
SHOX2-203ENST00000441443 ZNF32P17041 273 aa17.29■□□□□ 0.36
SHOX2-203ENST00000441443 BCL3P20749 454 aa17.29■□□□□ 0.36
SHOX2-203ENST00000441443 SERF2P84101 59 aa17.29■□□□□ 0.36
SHOX2-203ENST00000441443 GYPAP02724 150 aa17.28■□□□□ 0.36
SHOX2-203ENST00000441443 SPINK2P20155 84 aa17.28■□□□□ 0.36
SHOX2-203ENST00000441443 OR3A1P47881 315 aa17.28■□□□□ 0.36
SHOX2-203ENST00000441443 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.28■□□□□ 0.36
SHOX2-203ENST00000441443 CENPVQ7Z7K6 275 aaPredicted RBP17.28■□□□□ 0.36
SHOX2-203ENST00000441443 MAFAQ8NHW3 353 aaPredicted RBP17.28■□□□□ 0.36
SHOX2-203ENST00000441443 TBX15Q96SF7 602 aa17.28■□□□□ 0.36
SHOX2-203ENST00000441443 WDR61Q9GZS3 305 aaKnown RBP17.28■□□□□ 0.36
SHOX2-203ENST00000441443 KIR2DL5BA0A0G2JN68 375 aa17.28■□□□□ 0.36
SHOX2-203ENST00000441443 KIR2DL5BA0A0G2JPC4 375 aa17.28■□□□□ 0.36
SHOX2-203ENST00000441443 TUSC2O75896 110 aa17.28■□□□□ 0.36
SHOX2-203ENST00000441443 OR8G2PQ6IF36 304 aa17.28■□□□□ 0.36
SHOX2-203ENST00000441443 KIR2DL5AQ8N109 375 aa17.28■□□□□ 0.36
SHOX2-203ENST00000441443 ZFAND5O76080 213 aa17.27■□□□□ 0.36
SHOX2-203ENST00000441443 PSMB3P49720 205 aa17.27■□□□□ 0.36
SHOX2-203ENST00000441443 LPAL2Q16609 132 aa17.27■□□□□ 0.36
SHOX2-203ENST00000441443 TDRG1Q3Y452 100 aa17.27■□□□□ 0.36
SHOX2-203ENST00000441443 ZIC4Q8N9L1 334 aa17.27■□□□□ 0.36
SHOX2-203ENST00000441443 MS4A10Q96PG2 267 aa17.27■□□□□ 0.36
SHOX2-203ENST00000441443 RPLP1P05386 114 aaKnown RBP17.27■□□□□ 0.35
SHOX2-203ENST00000441443 FAM78BQ5VT40 261 aa17.27■□□□□ 0.35
SHOX2-203ENST00000441443 RAET1LQ5VY80 246 aa17.27■□□□□ 0.35
SHOX2-203ENST00000441443 IL22RA2Q969J5 263 aa17.27■□□□□ 0.35
SHOX2-203ENST00000441443 hCG_38984A0A1B0GV85 526 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 C3orf80F5H4A9 247 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 HPRT1P00492 218 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 IRF2P14316 349 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 BATFQ16520 125 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 OR10V1Q8NGI7 309 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 OR10J5Q8NHC4 309 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 DIDO1Q9BTC0 2240 aaKnown RBP17.26■□□□□ 0.35
SHOX2-203ENST00000441443 LILRA1O75019 489 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 GGCTO75223 188 aaKnown RBP17.26■□□□□ 0.35
SHOX2-203ENST00000441443 NAPSAO96009 420 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 ZDHHC23Q8IYP9 409 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 CISD2Q8N5K1 135 aaKnown RBP17.26■□□□□ 0.35
SHOX2-203ENST00000441443 FGFBP3Q8TAT2 258 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 TAF15Q92804 592 aaKnown RBP eCLIP17.26■□□□□ 0.35
SHOX2-203ENST00000441443 ALKBH3Q96Q83 286 aaPredicted RBP17.26■□□□□ 0.35
SHOX2-203ENST00000441443 RASL10BQ96S79 203 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 DOCK11Q5JSL3 2073 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 LY6G6EA0A0G2JKS1 128 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 CD300LBA8K4G0 201 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 IGKV1-39P01597 117 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 IGKV1D-39P04432 117 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 DEFA4P12838 97 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 GCH1P30793 250 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 HBG1P69891 147 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 HBG2P69892 147 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 U3KQA8 63 aa17.26■□□□□ 0.35
SHOX2-203ENST00000441443 ZNF16P17020 682 aaPredicted RBP17.25■□□□□ 0.35
SHOX2-203ENST00000441443 IL3RAP26951 378 aa17.25■□□□□ 0.35
SHOX2-203ENST00000441443 RNPS1Q15287 305 aaKnown RBP17.25■□□□□ 0.35
SHOX2-203ENST00000441443 SAP25Q8TEE9 199 aa17.25■□□□□ 0.35
SHOX2-203ENST00000441443 PINX1Q96BK5 328 aaKnown RBP17.25■□□□□ 0.35
SHOX2-203ENST00000441443 SPACA9Q96E40 222 aaPredicted RBP17.25■□□□□ 0.35
SHOX2-203ENST00000441443 DUSP23Q9BVJ7 150 aa17.25■□□□□ 0.35
SHOX2-203ENST00000441443 ERRFI1Q9UJM3 462 aaPredicted RBP17.25■□□□□ 0.35
SHOX2-203ENST00000441443 TRAPPC1Q9Y5R8 145 aa17.25■□□□□ 0.35
SHOX2-203ENST00000441443 A0A0U1RQK1 487 aa17.25■□□□□ 0.35
SHOX2-203ENST00000441443 ZNF320A2RRD8 509 aa17.25■□□□□ 0.35
SHOX2-203ENST00000441443 C1QTNF9BB2RNN3 333 aa17.25■□□□□ 0.35
SHOX2-203ENST00000441443 CCL4P13236 92 aa17.25■□□□□ 0.35
SHOX2-203ENST00000441443 EGR1P18146 543 aa17.25■□□□□ 0.35
SHOX2-203ENST00000441443 BMP5P22003 454 aa17.25■□□□□ 0.35
SHOX2-203ENST00000441443 OR10J1P30954 320 aa17.25■□□□□ 0.35
SHOX2-203ENST00000441443 PCP4P48539 62 aa17.25■□□□□ 0.35
SHOX2-203ENST00000441443 ACSM6Q6P461 480 aa17.25■□□□□ 0.35
SHOX2-203ENST00000441443 C20orf204Q6ZNR8 217 aa17.25■□□□□ 0.35
SHOX2-203ENST00000441443 CBY1Q9Y3M2 126 aa17.25■□□□□ 0.35
SHOX2-203ENST00000441443 IGLV3-12A0A075B6K2 115 aa17.24■□□□□ 0.35
SHOX2-203ENST00000441443 TNFSF11O14788 317 aa17.24■□□□□ 0.35
SHOX2-203ENST00000441443 NTF4P34130 210 aa17.24■□□□□ 0.35
SHOX2-203ENST00000441443 MLF1P58340 268 aa17.24■□□□□ 0.35
SHOX2-203ENST00000441443 PSG4Q00888 419 aa17.24■□□□□ 0.35
SHOX2-203ENST00000441443 ANAPC16Q96DE5 110 aa17.24■□□□□ 0.35
SHOX2-203ENST00000441443 DIRC2Q96SL1 478 aa17.24■□□□□ 0.35
SHOX2-203ENST00000441443 FADS6Q8N9I5 356 aa17.24■□□□□ 0.35
SHOX2-203ENST00000441443 IL1F10Q8WWZ1 152 aa17.24■□□□□ 0.35
SHOX2-203ENST00000441443 CLDN23Q96B33 292 aa17.24■□□□□ 0.35
SHOX2-203ENST00000441443 ZNF816-ZNF321PA0A0X1KG74 233 aa17.23■□□□□ 0.35
SHOX2-203ENST00000441443 TMEM250H0YL14 139 aa17.23■□□□□ 0.35
SHOX2-203ENST00000441443 PMP22Q01453 160 aa17.23■□□□□ 0.35
SHOX2-203ENST00000441443 PCSK4Q6UW60 755 aa17.23■□□□□ 0.35
SHOX2-203ENST00000441443 ZNF573Q86YE8 665 aa17.23■□□□□ 0.35
SHOX2-203ENST00000441443 IFI44Q8TCB0 444 aa17.23■□□□□ 0.35
SHOX2-203ENST00000441443 PAGE4O60829 102 aa17.23■□□□□ 0.35
SHOX2-203ENST00000441443 TOMM20LQ6UXN7 152 aa17.23■□□□□ 0.35
SHOX2-203ENST00000441443 ATP23Q9Y6H3 246 aa17.23■□□□□ 0.35
SHOX2-203ENST00000441443 SELEP16581 610 aa17.23■□□□□ 0.35
SHOX2-203ENST00000441443 SLC38A11Q08AI6 406 aa17.23■□□□□ 0.35
SHOX2-203ENST00000441443 ARSJQ5FYB0 599 aaPredicted RBP17.23■□□□□ 0.35
SHOX2-203ENST00000441443 PPP1R3CQ9UQK1 317 aa17.23■□□□□ 0.35
SHOX2-203ENST00000441443 KIR2DS1A0A191URI9 304 aa17.22■□□□□ 0.35
SHOX2-203ENST00000441443 GRIFINA4D1Z8 144 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms