RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 NXPH3O95157 252 aa10.16□□□□□ -0.78
LTBR-203ENST00000441074 HPRT1P00492 218 aa10.16□□□□□ -0.78
LTBR-203ENST00000441074 MEF2BQ02080 365 aaPredicted RBP10.16□□□□□ -0.78
LTBR-203ENST00000441074 ZNF92Q03936 586 aa10.16□□□□□ -0.78
LTBR-203ENST00000441074 RSPO4Q2I0M5 234 aaPredicted RBP10.16□□□□□ -0.78
LTBR-203ENST00000441074 ZNF705AQ6ZN79 300 aaPredicted RBP10.16□□□□□ -0.78
LTBR-203ENST00000441074 ZNF818PQ6ZRF7 136 aa10.16□□□□□ -0.78
LTBR-203ENST00000441074 ZNF295-AS1Q8N0V1 137 aa10.16□□□□□ -0.78
LTBR-203ENST00000441074 GAPTQ8N292 157 aa10.16□□□□□ -0.78
LTBR-203ENST00000441074 OR5D13Q8NGL4 314 aa10.16□□□□□ -0.78
LTBR-203ENST00000441074 TMEM54Q969K7 222 aa10.16□□□□□ -0.78
LTBR-203ENST00000441074 PINX1Q96BK5 328 aaKnown RBP10.16□□□□□ -0.78
LTBR-203ENST00000441074 MAP1LC3BQ9GZQ8 125 aa10.16□□□□□ -0.78
LTBR-203ENST00000441074 OPN3Q9H1Y3 402 aaPredicted RBP10.16□□□□□ -0.78
LTBR-203ENST00000441074 FOXJ2Q9P0K8 574 aa10.16□□□□□ -0.78
LTBR-203ENST00000441074 ST3GAL6Q9Y274 331 aa10.16□□□□□ -0.78
LTBR-203ENST00000441074 IGKV1-12A0A0C4DH73 117 aa10.16□□□□□ -0.78
LTBR-203ENST00000441074 LRRC3CA6NJW4 275 aa10.16□□□□□ -0.78
LTBR-203ENST00000441074 IGKV1D-12P01611 117 aa10.16□□□□□ -0.78
LTBR-203ENST00000441074 CYC1P08574 325 aa10.16□□□□□ -0.78
LTBR-203ENST00000441074 TCN2P20062 427 aa10.16□□□□□ -0.78
LTBR-203ENST00000441074 TMEM267Q0VDI3 215 aaPredicted RBP10.16□□□□□ -0.78
LTBR-203ENST00000441074 PRAMEF20Q5VT98 475 aa10.16□□□□□ -0.78
LTBR-203ENST00000441074 Q6ZS49 121 aa10.16□□□□□ -0.78
LTBR-203ENST00000441074 PRR18Q8N4B5 295 aa10.16□□□□□ -0.78
LTBR-203ENST00000441074 SPTSSAQ969W0 71 aa10.16□□□□□ -0.78
LTBR-203ENST00000441074 SPACA9Q96E40 222 aaPredicted RBP10.16□□□□□ -0.78
LTBR-203ENST00000441074 BORCS8Q96FH0 119 aa10.16□□□□□ -0.78
LTBR-203ENST00000441074 REPIN1Q9BWE0 567 aaKnown RBP10.16□□□□□ -0.78
LTBR-203ENST00000441074 C19orf25Q9UFG5 118 aaPredicted RBP10.16□□□□□ -0.78
LTBR-203ENST00000441074 SPAARA0A1B0GVQ0 90 aa10.15□□□□□ -0.78
LTBR-203ENST00000441074 A6NNC1 897 aa10.15□□□□□ -0.78
LTBR-203ENST00000441074 SLC25A6P12236 298 aa10.15□□□□□ -0.78
LTBR-203ENST00000441074 PCOLCEQ15113 449 aa10.15□□□□□ -0.78
LTBR-203ENST00000441074 CLEC12BQ2HXU8 276 aa10.15□□□□□ -0.78
LTBR-203ENST00000441074 LRRC75BQ2VPJ9 315 aa10.15□□□□□ -0.78
LTBR-203ENST00000441074 SNAI3Q3KNW1 292 aa10.15□□□□□ -0.78
LTBR-203ENST00000441074 ARSJQ5FYB0 599 aaPredicted RBP10.15□□□□□ -0.78
LTBR-203ENST00000441074 ZNF525Q8N782 197 aa10.15□□□□□ -0.78
LTBR-203ENST00000441074 C20orf144Q9BQM9 153 aa10.15□□□□□ -0.78
LTBR-203ENST00000441074 ZNF442Q9H7R0 627 aa10.15□□□□□ -0.78
LTBR-203ENST00000441074 KIAA1324LA8MWY0 1029 aaPredicted RBP10.15□□□□□ -0.79
LTBR-203ENST00000441074 H0Y980 276 aa10.15□□□□□ -0.79
LTBR-203ENST00000441074 H3BP45 60 aa10.15□□□□□ -0.79
LTBR-203ENST00000441074 VAMP5O95183 116 aa10.15□□□□□ -0.79
LTBR-203ENST00000441074 LCN2P80188 198 aa10.15□□□□□ -0.79
LTBR-203ENST00000441074 PRSS8Q16651 343 aa10.15□□□□□ -0.79
LTBR-203ENST00000441074 DCAF12Q5T6F0 453 aa10.15□□□□□ -0.79
LTBR-203ENST00000441074 NABP1Q96AH0 204 aa10.15□□□□□ -0.79
LTBR-203ENST00000441074 RPUSD4Q96CM3 377 aaKnown RBP10.15□□□□□ -0.79
LTBR-203ENST00000441074 MS4A10Q96PG2 267 aa10.15□□□□□ -0.79
LTBR-203ENST00000441074 TBX15Q96SF7 602 aa10.15□□□□□ -0.79
LTBR-203ENST00000441074 MIEN1Q9BRT3 115 aa10.15□□□□□ -0.79
LTBR-203ENST00000441074 DEFB126Q9BYW3 111 aa10.15□□□□□ -0.79
LTBR-203ENST00000441074 IGHV1-45A0A0A0MS14 117 aa10.14□□□□□ -0.79
LTBR-203ENST00000441074 ZNF705FA8MVS1 300 aaPredicted RBP10.14□□□□□ -0.79
LTBR-203ENST00000441074 C9orf172C9J069 976 aa10.14□□□□□ -0.79
LTBR-203ENST00000441074 CNOT4O95628 575 aaKnown RBP10.14□□□□□ -0.79
LTBR-203ENST00000441074 ZNF705DP0CH99 300 aaPredicted RBP10.14□□□□□ -0.79
LTBR-203ENST00000441074 ZNF705BP0CI00 300 aaPredicted RBP10.14□□□□□ -0.79
LTBR-203ENST00000441074 IRF2P14316 349 aa10.14□□□□□ -0.79
LTBR-203ENST00000441074 OTX2P32243 289 aa10.14□□□□□ -0.79
LTBR-203ENST00000441074 TRA2AQ13595 282 aaKnown RBP eCLIP10.14□□□□□ -0.79
LTBR-203ENST00000441074 RTP5Q14D33 572 aa10.14□□□□□ -0.79
LTBR-203ENST00000441074 SRSF7Q16629 238 aaKnown RBP eCLIP10.14□□□□□ -0.79
LTBR-203ENST00000441074 KCNIP4Q6PIL6 250 aa10.14□□□□□ -0.79
LTBR-203ENST00000441074 ZCCHC14Q8WYQ9 949 aaKnown RBP10.14□□□□□ -0.79
LTBR-203ENST00000441074 LHX4Q969G2 390 aa10.14□□□□□ -0.79
LTBR-203ENST00000441074 RASL10BQ96S79 203 aa10.14□□□□□ -0.79
LTBR-203ENST00000441074 PARD6GQ9BYG4 376 aaPredicted RBP10.14□□□□□ -0.79
LTBR-203ENST00000441074 PARLQ9H300 379 aa10.14□□□□□ -0.79
LTBR-203ENST00000441074 LPAR2Q9HBW0 351 aa10.14□□□□□ -0.79
LTBR-203ENST00000441074 SLC39A9Q9NUM3 307 aa10.14□□□□□ -0.79
LTBR-203ENST00000441074 NCOA6Q14686 2063 aaPredicted RBP10.14□□□□□ -0.79
LTBR-203ENST00000441074 PIGBOS1A0A0B4J2F0 54 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 SLC22A20A6NK97 555 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 IFNL4K9M1U5 179 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 DHHO43323 396 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 TNFSF13O75888 250 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 DKK1O94907 266 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 COX6A1P12074 109 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 BRS3P32247 399 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 PSMB3P49720 205 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 RBM11P57052 281 aaKnown RBP10.13□□□□□ -0.79
LTBR-203ENST00000441074 PDCD1Q15116 288 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 ZNF468Q5VIY5 522 aaPredicted RBP10.13□□□□□ -0.79
LTBR-203ENST00000441074 GPR146Q96CH1 333 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 BTF3L4Q96K17 158 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 WFIKKN1Q96NZ8 548 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 GPHA2Q96T91 129 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 PLK3Q9H4B4 646 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 PLEK2Q9NYT0 353 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 IGKV1D-13A0A0B4J2D9 117 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 NPIPA2E9PIF3 369 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 NPIPA3F8WFD2 350 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 TNFSF12O43508 249 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 TUSC2O75896 110 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 NRASP01111 189 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 GYPAP02724 150 aa10.13□□□□□ -0.79
LTBR-203ENST00000441074 IGKV1-13P0DP09 117 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms