RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 IFNA21P01568 189 aa12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 RPS2P15880 293 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 TMEM33P57088 247 aa12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 RND3P61587 244 aa12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 CYCSP99999 105 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 SRSF4Q08170 494 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 LOXL1Q08397 574 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 EDDM3AQ14507 147 aa12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 FAM201AQ5SY85 155 aa12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 H1FOOQ8IZA3 346 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 CD177Q8N6Q3 437 aa12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 Q8TCH9 128 aa12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 SNX22Q96L94 193 aa12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 GON7Q9BXV9 100 aa12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 TAF9BQ9HBM6 251 aa12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 PRR13Q9NZ81 148 aa12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 RBM7Q9Y580 266 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 YLPM1P49750 1951 aaKnown RBP12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 NKX6-3A6NJ46 265 aa12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 L7N2F9 121 aa12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 HSD17B6O14756 317 aa12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 MGST3O14880 152 aa12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 RGS13O14921 159 aa12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 TFF1P04155 84 aa12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 FOSL1P15407 271 aa12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 SRPXP78539 464 aa12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 AESQ08117 197 aa12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 TMEM249Q2WGJ8 235 aa12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 Q5BKY6 102 aa12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 LAMTOR1Q6IAA8 161 aa12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 C5orf24Q7Z6I8 188 aa12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 CMTM1Q8IZ96 169 aa12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 C1orf87Q8N0U7 546 aa12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 CLDND2Q8NHS1 167 aa12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 WDR89Q96FK6 387 aaPredicted RBP12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 SEC22AQ96IW7 307 aa12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 OR1A1Q9P1Q5 309 aa12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 METRNQ9UJH8 293 aa12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 OR2W1Q9Y3N9 320 aa12.07□□□□□ -0.48
TNFRSF1A-204ENST00000440083 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.06□□□□□ -0.487e-7■■■□□ 15.7
TNFRSF1A-204ENST00000440083 IGKV1D-17A0A075B6S4 117 aa12.06□□□□□ -0.48
TNFRSF1A-204ENST00000440083 HMSDA8MTL9 139 aa12.06□□□□□ -0.48
TNFRSF1A-204ENST00000440083 TMEM178BH3BS89 294 aa12.06□□□□□ -0.48
TNFRSF1A-204ENST00000440083 PHF1O43189 567 aaPredicted RBP12.06□□□□□ -0.48
TNFRSF1A-204ENST00000440083 LHBP01229 141 aa12.06□□□□□ -0.48
TNFRSF1A-204ENST00000440083 HOXB5P09067 269 aa12.06□□□□□ -0.48
TNFRSF1A-204ENST00000440083 OR5AC1P0C628 307 aa12.06□□□□□ -0.48
TNFRSF1A-204ENST00000440083 IGHV4-31P0DP07 118 aa12.06□□□□□ -0.48
TNFRSF1A-204ENST00000440083 LUMP51884 338 aaPredicted RBP12.06□□□□□ -0.48
TNFRSF1A-204ENST00000440083 IFITM2Q01629 132 aa12.06□□□□□ -0.48
TNFRSF1A-204ENST00000440083 LRRC37A5PQ49AS3 106 aa12.06□□□□□ -0.48
TNFRSF1A-204ENST00000440083 CLEC9AQ6UXN8 241 aa12.06□□□□□ -0.48
TNFRSF1A-204ENST00000440083 LGI3Q8N145 548 aa12.06□□□□□ -0.48
TNFRSF1A-204ENST00000440083 ZNF561Q8N587 486 aa12.06□□□□□ -0.48
TNFRSF1A-204ENST00000440083 OR10V1Q8NGI7 309 aa12.06□□□□□ -0.48
TNFRSF1A-204ENST00000440083 THAP6Q8TBB0 222 aa12.06□□□□□ -0.48
TNFRSF1A-204ENST00000440083 GALMQ96C23 342 aa12.06□□□□□ -0.48
TNFRSF1A-204ENST00000440083 GALNT14Q96FL9 552 aa12.06□□□□□ -0.48
TNFRSF1A-204ENST00000440083 COQ2Q96H96 371 aa12.06□□□□□ -0.48
TNFRSF1A-204ENST00000440083 NMES1Q9C002 83 aa12.06□□□□□ -0.48
TNFRSF1A-204ENST00000440083 KCNS2Q9ULS6 477 aa12.06□□□□□ -0.48
TNFRSF1A-204ENST00000440083 FN1P02751 2386 aaKnown RBP12.05□□□□□ -0.48
TNFRSF1A-204ENST00000440083 MPPED1O15442 326 aa12.05□□□□□ -0.48
TNFRSF1A-204ENST00000440083 ARPC5O15511 151 aa12.05□□□□□ -0.48
TNFRSF1A-204ENST00000440083 ADAP1O75689 374 aa12.05□□□□□ -0.48
TNFRSF1A-204ENST00000440083 IGHV2-70P01814 119 aa12.05□□□□□ -0.48
TNFRSF1A-204ENST00000440083 PET100P0DJ07 73 aa12.05□□□□□ -0.48
TNFRSF1A-204ENST00000440083 ZNF16P17020 682 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF1A-204ENST00000440083 PAX5Q02548 391 aa12.05□□□□□ -0.48
TNFRSF1A-204ENST00000440083 TMEM187Q14656 261 aa12.05□□□□□ -0.48
TNFRSF1A-204ENST00000440083 STUMQ69YW2 141 aa12.05□□□□□ -0.48
TNFRSF1A-204ENST00000440083 LIAT1Q6ZQX7 453 aa12.05□□□□□ -0.48
TNFRSF1A-204ENST00000440083 TBC1D26Q86UD7 250 aa12.05□□□□□ -0.48
TNFRSF1A-204ENST00000440083 MRGPRDQ8TDS7 321 aa12.05□□□□□ -0.48
TNFRSF1A-204ENST00000440083 RAB1CQ92928 201 aa12.05□□□□□ -0.48
TNFRSF1A-204ENST00000440083 TIMD4Q96H15 378 aa12.05□□□□□ -0.48
TNFRSF1A-204ENST00000440083 C2orf50Q96LR7 162 aa12.05□□□□□ -0.48
TNFRSF1A-204ENST00000440083 RAB9BQ9NP90 201 aa12.05□□□□□ -0.48
TNFRSF1A-204ENST00000440083 RDH8Q9NYR8 311 aa12.05□□□□□ -0.48
TNFRSF1A-204ENST00000440083 UBE2J1Q9Y385 318 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF1A-204ENST00000440083 HIVEP2P31629 2446 aa12.05□□□□□ -0.48
TNFRSF1A-204ENST00000440083 MALRD1Q5VYJ5 2156 aa12.04□□□□□ -0.48
TNFRSF1A-204ENST00000440083 TRAV14DV4A0A0A6YYC5 116 aa12.04□□□□□ -0.48
TNFRSF1A-204ENST00000440083 IGKV1D-13A0A0B4J2D9 117 aa12.04□□□□□ -0.48
TNFRSF1A-204ENST00000440083 C3orf85A0A1B0GTC6 90 aa12.04□□□□□ -0.48
TNFRSF1A-204ENST00000440083 C12orf77C9JDV5 145 aa12.04□□□□□ -0.48
TNFRSF1A-204ENST00000440083 SPINT2O43291 252 aa12.04□□□□□ -0.48
TNFRSF1A-204ENST00000440083 ZNF737O75373 536 aa12.04□□□□□ -0.48
TNFRSF1A-204ENST00000440083 HBZP02008 142 aa12.04□□□□□ -0.48
TNFRSF1A-204ENST00000440083 IGKV1-13P0DP09 117 aa12.04□□□□□ -0.48
TNFRSF1A-204ENST00000440083 SLC25A4P12235 298 aa12.04□□□□□ -0.48
TNFRSF1A-204ENST00000440083 MUC1P15941 1255 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF1A-204ENST00000440083 GNRHRP30968 328 aa12.04□□□□□ -0.48
TNFRSF1A-204ENST00000440083 GLIPR1P48060 266 aa12.04□□□□□ -0.48
TNFRSF1A-204ENST00000440083 LGALSLQ3ZCW2 172 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF1A-204ENST00000440083 C11orf87Q6NUJ2 197 aa12.04□□□□□ -0.48
TNFRSF1A-204ENST00000440083 ZNF818PQ6ZRF7 136 aa12.04□□□□□ -0.48
TNFRSF1A-204ENST00000440083 OR5D13Q8NGL4 314 aa12.04□□□□□ -0.48
TNFRSF1A-204ENST00000440083 OR1L1Q8NH94 360 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms