RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 GADD45AP24522 165 aa18.83■□□□□ 0.6
VARS-217ENST00000440048 LY6G6FQ5SQ64 297 aa18.83■□□□□ 0.6
VARS-217ENST00000440048 LYG1Q8N1E2 194 aa18.83■□□□□ 0.6
VARS-217ENST00000440048 WIPF2Q8TF74 440 aaPredicted RBP18.83■□□□□ 0.6
VARS-217ENST00000440048 IL1F10Q8WWZ1 152 aa18.83■□□□□ 0.6
VARS-217ENST00000440048 CMSS1Q9BQ75 279 aaKnown RBP18.83■□□□□ 0.6
VARS-217ENST00000440048 ABHD14AQ9BUJ0 271 aa18.83■□□□□ 0.6
VARS-217ENST00000440048 C12orf4Q9NQ89 552 aa18.83■□□□□ 0.6
VARS-217ENST00000440048 NOTCH1P46531 2555 aa18.83■□□□□ 0.6
VARS-217ENST00000440048 PEX14O75381 377 aa18.82■□□□□ 0.6
VARS-217ENST00000440048 LPLP06858 475 aa18.82■□□□□ 0.6
VARS-217ENST00000440048 EBI3Q14213 229 aa18.82■□□□□ 0.6
VARS-217ENST00000440048 TGIF2LXQ8IUE1 241 aa18.82■□□□□ 0.6
VARS-217ENST00000440048 IZUMO1Q8IYV9 350 aa18.82■□□□□ 0.6
VARS-217ENST00000440048 RAB3CQ96E17 227 aa18.82■□□□□ 0.6
VARS-217ENST00000440048 KCTD7Q96MP8 289 aa18.82■□□□□ 0.6
VARS-217ENST00000440048 RNF167Q9H6Y7 350 aa18.82■□□□□ 0.6
VARS-217ENST00000440048 Q9N2K0 584 aa18.82■□□□□ 0.6
VARS-217ENST00000440048 KCNK7Q9Y2U2 307 aa18.82■□□□□ 0.6
VARS-217ENST00000440048 LOC100506127A0A0U1RQW1 187 aa18.81■□□□□ 0.6
VARS-217ENST00000440048 TXNL1O43396 289 aa18.81■□□□□ 0.6
VARS-217ENST00000440048 TNFAIP8O95379 198 aa18.81■□□□□ 0.6
VARS-217ENST00000440048 SDC2P34741 201 aa18.81■□□□□ 0.6
VARS-217ENST00000440048 HLA-DRB3P79483 266 aa18.81■□□□□ 0.6
VARS-217ENST00000440048 TSPAN14Q8NG11 270 aa18.81■□□□□ 0.6
VARS-217ENST00000440048 OR10R2Q8NGX6 335 aa18.81■□□□□ 0.6
VARS-217ENST00000440048 PTX4Q96A99 478 aa18.81■□□□□ 0.6
VARS-217ENST00000440048 EAF1Q96JC9 268 aaPredicted RBP18.81■□□□□ 0.6
VARS-217ENST00000440048 MGAT4AQ9UM21 535 aa18.81■□□□□ 0.6
VARS-217ENST00000440048 A0A087WXM4 84 aa18.8■□□□□ 0.6
VARS-217ENST00000440048 ZNF736B4DX44 427 aaPredicted RBP18.8■□□□□ 0.6
VARS-217ENST00000440048 RAB27BO00194 218 aa18.8■□□□□ 0.6
VARS-217ENST00000440048 LANCL1O43813 399 aa18.8■□□□□ 0.6
VARS-217ENST00000440048 CD1BP29016 333 aa18.8■□□□□ 0.6
VARS-217ENST00000440048 C9orf152Q5JTZ5 239 aa18.8■□□□□ 0.6
VARS-217ENST00000440048 ODF3L1Q8IXM7 274 aa18.8■□□□□ 0.6
VARS-217ENST00000440048 DAPK2Q9UIK4 370 aa18.8■□□□□ 0.6
VARS-217ENST00000440048 METTL21EPA6NDL7 271 aa18.79■□□□□ 0.6
VARS-217ENST00000440048 FBXO24O75426 580 aa18.79■□□□□ 0.6
VARS-217ENST00000440048 TSPAN15O95858 294 aa18.79■□□□□ 0.6
VARS-217ENST00000440048 CD3GP09693 182 aa18.79■□□□□ 0.6
VARS-217ENST00000440048 CLEC2LP0C7M8 214 aa18.79■□□□□ 0.6
VARS-217ENST00000440048 CD28P10747 220 aa18.79■□□□□ 0.6
VARS-217ENST00000440048 C2orf68Q2NKX9 166 aa18.79■□□□□ 0.6
VARS-217ENST00000440048 SFXN4Q6P4A7 337 aa18.79■□□□□ 0.6
VARS-217ENST00000440048 Q8N6K4 173 aa18.79■□□□□ 0.6
VARS-217ENST00000440048 C5orf56Q8N8D9 126 aa18.79■□□□□ 0.6
VARS-217ENST00000440048 OR2AK2Q8NG84 335 aa18.79■□□□□ 0.6
VARS-217ENST00000440048 OR2T10Q8NGZ9 312 aa18.79■□□□□ 0.6
VARS-217ENST00000440048 CENPOQ9BU64 300 aa18.79■□□□□ 0.6
VARS-217ENST00000440048 MFNGO00587 321 aa18.78■□□□□ 0.6
VARS-217ENST00000440048 FGF16O43320 207 aa18.78■□□□□ 0.6
VARS-217ENST00000440048 SCTP09683 121 aa18.78■□□□□ 0.6
VARS-217ENST00000440048 HIST1H1DP16402 221 aaKnown RBP18.78■□□□□ 0.6
VARS-217ENST00000440048 GNB3P16520 340 aa18.78■□□□□ 0.6
VARS-217ENST00000440048 MXD1Q05195 221 aa18.78■□□□□ 0.6
VARS-217ENST00000440048 PARP12Q9H0J9 701 aaKnown RBP18.78■□□□□ 0.6
VARS-217ENST00000440048 ATG5Q9H1Y0 275 aa18.78■□□□□ 0.6
VARS-217ENST00000440048 IFI27L2Q9H2X8 130 aa18.78■□□□□ 0.6
VARS-217ENST00000440048 MMP27Q9H306 513 aa18.78■□□□□ 0.6
VARS-217ENST00000440048 A0A075B6Q4 140 aa18.77■□□□□ 0.6
VARS-217ENST00000440048 SNRPBP14678 240 aaKnown RBP18.77■□□□□ 0.6
VARS-217ENST00000440048 OR3A3P47888 321 aa18.77■□□□□ 0.6
VARS-217ENST00000440048 MRPS15P82914 257 aaKnown RBP18.77■□□□□ 0.6
VARS-217ENST00000440048 RBMXL1Q96E39 390 aaKnown RBP18.77■□□□□ 0.6
VARS-217ENST00000440048 VCX3AQ9NNX9 186 aa18.77■□□□□ 0.6
VARS-217ENST00000440048 OR1A1Q9P1Q5 309 aa18.77■□□□□ 0.6
VARS-217ENST00000440048 SLC23A1Q9UHI7 598 aa18.77■□□□□ 0.6
VARS-217ENST00000440048 TRDCB7Z8K6 153 aa18.76■□□□□ 0.59
VARS-217ENST00000440048 ST8SIA5O15466 376 aa18.76■□□□□ 0.59
VARS-217ENST00000440048 MOSP00540 346 aa18.76■□□□□ 0.59
VARS-217ENST00000440048 CSF1P09603 554 aa18.76■□□□□ 0.59
VARS-217ENST00000440048 LSAMPQ13449 338 aa18.76■□□□□ 0.59
VARS-217ENST00000440048 ZNF833PQ6ZTB9 187 aa18.76■□□□□ 0.59
VARS-217ENST00000440048 CENPVQ7Z7K6 275 aaPredicted RBP18.76■□□□□ 0.59
VARS-217ENST00000440048 MRPL20Q9BYC9 149 aaKnown RBP18.76■□□□□ 0.59
VARS-217ENST00000440048 SAA2-SAA4A0A096LPE2 208 aa18.75■□□□□ 0.59
VARS-217ENST00000440048 IGKV1-6A0A0C4DH72 117 aa18.75■□□□□ 0.59
VARS-217ENST00000440048 NCBP2LA6PVI3 153 aaKnown RBP18.75■□□□□ 0.59
VARS-217ENST00000440048 HSPA12AO43301 675 aa18.75■□□□□ 0.59
VARS-217ENST00000440048 FCGR3AP08637 254 aa18.75■□□□□ 0.59
VARS-217ENST00000440048 SAA2P0DJI9 122 aaPredicted RBP18.75■□□□□ 0.59
VARS-217ENST00000440048 ZBTB25P24278 435 aa18.75■□□□□ 0.59
VARS-217ENST00000440048 CEACAM6P40199 344 aa18.75■□□□□ 0.59
VARS-217ENST00000440048 OR5AU1Q8NGC0 362 aa18.75■□□□□ 0.59
VARS-217ENST00000440048 LGALS14Q8TCE9 139 aa18.75■□□□□ 0.59
VARS-217ENST00000440048 YIPF6Q96EC8 236 aa18.75■□□□□ 0.59
VARS-217ENST00000440048 NABP2Q9BQ15 211 aa18.75■□□□□ 0.59
VARS-217ENST00000440048 PLSCR3Q9NRY6 295 aa18.75■□□□□ 0.59
VARS-217ENST00000440048 SERPINE3A8MV23 424 aa18.74■□□□□ 0.59
VARS-217ENST00000440048 ITGB1BP1O14713 200 aa18.74■□□□□ 0.59
VARS-217ENST00000440048 TIMM50Q3ZCQ8 353 aa18.74■□□□□ 0.59
VARS-217ENST00000440048 Q8N9W7 124 aa18.74■□□□□ 0.59
VARS-217ENST00000440048 FAM110DQ8TAY7 271 aaPredicted RBP18.74■□□□□ 0.59
VARS-217ENST00000440048 CITED2Q99967 270 aaPredicted RBP18.74■□□□□ 0.59
VARS-217ENST00000440048 PIPOXQ9P0Z9 390 aa18.74■□□□□ 0.59
VARS-217ENST00000440048 TRIM64CA6NLI5 447 aa18.73■□□□□ 0.59
VARS-217ENST00000440048 RAB29O14966 203 aa18.73■□□□□ 0.59
VARS-217ENST00000440048 ARFRP1Q13795 201 aa18.73■□□□□ 0.59
VARS-217ENST00000440048 NSUN5P1Q3KNT7 163 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms