RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 HFEQ30201 348 aa12.56□□□□□ -0.4
CPSF7-205ENST00000439958 FAM185AQ8N0U4 392 aa12.56□□□□□ -0.4
CPSF7-205ENST00000439958 OR1S1Q8NH92 325 aa12.56□□□□□ -0.4
CPSF7-205ENST00000439958 ZNF665Q9H7R5 613 aa12.56□□□□□ -0.4
CPSF7-205ENST00000439958 PPIAL4AQ9Y536 164 aa12.56□□□□□ -0.4
CPSF7-205ENST00000439958 ZNF737O75373 536 aa12.56□□□□□ -0.4
CPSF7-205ENST00000439958 TEX261Q6UWH6 196 aa12.56□□□□□ -0.4
CPSF7-205ENST00000439958 OR10Z1Q8NGY1 313 aa12.56□□□□□ -0.4
CPSF7-205ENST00000439958 IFT22Q9H7X7 185 aa12.56□□□□□ -0.4
CPSF7-205ENST00000439958 TMEM106BQ9NUM4 274 aa12.56□□□□□ -0.4
CPSF7-205ENST00000439958 U3KQ87 197 aa12.56□□□□□ -0.4
CPSF7-205ENST00000439958 TRGV10A0A0A0MS01 117 aa12.55□□□□□ -0.4
CPSF7-205ENST00000439958 KRASP01116 189 aa12.55□□□□□ -0.4
CPSF7-205ENST00000439958 FAM74A1Q5RGS3 127 aa12.55□□□□□ -0.4
CPSF7-205ENST00000439958 DRAM1Q8N682 238 aa12.55□□□□□ -0.4
CPSF7-205ENST00000439958 RRNAD1Q96FB5 475 aaKnown RBP12.55□□□□□ -0.4
CPSF7-205ENST00000439958 UBTD1Q9HAC8 227 aa12.55□□□□□ -0.4
CPSF7-205ENST00000439958 P2RX3P56373 397 aa12.55□□□□□ -0.4
CPSF7-205ENST00000439958 SSX9Q7RTT3 188 aa12.55□□□□□ -0.4
CPSF7-205ENST00000439958 TRAV38-1A0A0B4J264 116 aa12.55□□□□□ -0.4
CPSF7-205ENST00000439958 IGHV1-69-2A0A0G2JMI3 117 aa12.55□□□□□ -0.4
CPSF7-205ENST00000439958 DBX1A6NMT0 343 aa12.55□□□□□ -0.4
CPSF7-205ENST00000439958 H3BP45 60 aa12.55□□□□□ -0.4
CPSF7-205ENST00000439958 K7N7A8 449 aa12.55□□□□□ -0.4
CPSF7-205ENST00000439958 IFNA7P01567 189 aa12.55□□□□□ -0.4
CPSF7-205ENST00000439958 F2RP25116 425 aa12.55□□□□□ -0.4
CPSF7-205ENST00000439958 TMEM222Q9H0R3 208 aa12.55□□□□□ -0.4
CPSF7-205ENST00000439958 SLC25A10Q9UBX3 287 aaPredicted RBP12.55□□□□□ -0.4
CPSF7-205ENST00000439958 MSGN1A6NI15 193 aa12.54□□□□□ -0.4
CPSF7-205ENST00000439958 H0YIZ8 118 aa12.54□□□□□ -0.4
CPSF7-205ENST00000439958 LMO1P25800 156 aa12.54□□□□□ -0.4
CPSF7-205ENST00000439958 TAGLNQ01995 201 aaKnown RBP12.54□□□□□ -0.4
CPSF7-205ENST00000439958 DHRS9Q9BPW9 319 aa12.54□□□□□ -0.4
CPSF7-205ENST00000439958 MBNL3Q9NUK0 354 aaKnown RBP12.54□□□□□ -0.4
CPSF7-205ENST00000439958 PET100P0DJ07 73 aa12.54□□□□□ -0.4
CPSF7-205ENST00000439958 GPR12P47775 334 aa12.54□□□□□ -0.4
CPSF7-205ENST00000439958 UCP3P55916 312 aa12.54□□□□□ -0.4
CPSF7-205ENST00000439958 HRNRQ86YZ3 2850 aaPredicted RBP12.54□□□□□ -0.4
CPSF7-205ENST00000439958 SSSCA1O60232 199 aa12.54□□□□□ -0.4
CPSF7-205ENST00000439958 HMGN3Q15651 99 aa12.54□□□□□ -0.4
CPSF7-205ENST00000439958 LYPD2Q6UXB3 125 aa12.54□□□□□ -0.4
CPSF7-205ENST00000439958 MSI2Q96DH6 328 aaKnown RBP12.54□□□□□ -0.4
CPSF7-205ENST00000439958 CALYQ9NYX4 217 aa12.54□□□□□ -0.4
CPSF7-205ENST00000439958 UBQLN2Q9UHD9 624 aa12.54□□□□□ -0.4
CPSF7-205ENST00000439958 B9A039 149 aa12.53□□□□□ -0.4
CPSF7-205ENST00000439958 POLR2GP62487 172 aaKnown RBP eCLIP12.53□□□□□ -0.4
CPSF7-205ENST00000439958 RPL31P62899 125 aaKnown RBP12.53□□□□□ -0.4
CPSF7-205ENST00000439958 Q6ZS49 121 aa12.53□□□□□ -0.4
CPSF7-205ENST00000439958 NMES1Q9C002 83 aa12.53□□□□□ -0.4
CPSF7-205ENST00000439958 ZNRD1Q9P1U0 126 aa12.53□□□□□ -0.4
CPSF7-205ENST00000439958 ARHGAP32A7KAX9 2087 aa12.53□□□□□ -0.4
CPSF7-205ENST00000439958 K7EPK0 472 aa12.53□□□□□ -0.4
CPSF7-205ENST00000439958 CD8AP01732 235 aa12.53□□□□□ -0.4
CPSF7-205ENST00000439958 UTF1Q5T230 341 aa12.53□□□□□ -0.4
CPSF7-205ENST00000439958 PRAMEF5Q5TYX0 476 aa12.53□□□□□ -0.4
CPSF7-205ENST00000439958 ZNF880Q6PDB4 577 aa12.53□□□□□ -0.4
CPSF7-205ENST00000439958 ACOT7LQ6ZUV0 252 aa12.53□□□□□ -0.4
CPSF7-205ENST00000439958 FAM71E2Q8N5Q1 922 aa12.53□□□□□ -0.4
CPSF7-205ENST00000439958 CABLES2Q9BTV7 478 aa12.53□□□□□ -0.4
CPSF7-205ENST00000439958 PLEKHF2Q9H8W4 249 aa12.53□□□□□ -0.4
CPSF7-205ENST00000439958 TRBV6-6A0A0A6YYG2 114 aa12.53□□□□□ -0.4
CPSF7-205ENST00000439958 M0R1X1 148 aa12.53□□□□□ -0.4
CPSF7-205ENST00000439958 CCL3L1P16619 93 aa12.53□□□□□ -0.4
CPSF7-205ENST00000439958 GZMHP20718 246 aa12.53□□□□□ -0.4
CPSF7-205ENST00000439958 FAM209AQ5JX71 171 aa12.53□□□□□ -0.4
CPSF7-205ENST00000439958 KDF1Q8NAX2 398 aaPredicted RBP12.53□□□□□ -0.4
CPSF7-205ENST00000439958 RBPMSQ93062 196 aaKnown RBP12.53□□□□□ -0.4
CPSF7-205ENST00000439958 GALNT14Q96FL9 552 aa12.53□□□□□ -0.4
CPSF7-205ENST00000439958 OR6C3Q9NZP0 311 aa12.53□□□□□ -0.4
CPSF7-205ENST00000439958 HMSDA8MTL9 139 aa12.52□□□□□ -0.4
CPSF7-205ENST00000439958 ACAA1P09110 424 aaPredicted RBP12.52□□□□□ -0.4
CPSF7-205ENST00000439958 CDKN1AP38936 164 aa12.52□□□□□ -0.4
CPSF7-205ENST00000439958 GATA4P43694 442 aa12.52□□□□□ -0.4
CPSF7-205ENST00000439958 CXorf66Q5JRM2 361 aaPredicted RBP12.52□□□□□ -0.4
CPSF7-205ENST00000439958 SSX8Q7RTT4 187 aa12.52□□□□□ -0.4
CPSF7-205ENST00000439958 LYG1Q8N1E2 194 aa12.52□□□□□ -0.4
CPSF7-205ENST00000439958 ZNF561Q8N587 486 aa12.52□□□□□ -0.4
CPSF7-205ENST00000439958 OR5D13Q8NGL4 314 aa12.52□□□□□ -0.4
CPSF7-205ENST00000439958 GAFA1Q96PS6 74 aa12.52□□□□□ -0.4
CPSF7-205ENST00000439958 CNTNAP3Q9BZ76 1288 aa12.52□□□□□ -0.4
CPSF7-205ENST00000439958 TNFSF18Q9UNG2 199 aa12.52□□□□□ -0.4
CPSF7-205ENST00000439958 DOPEY1Q5JWR5 2465 aa12.52□□□□□ -0.4
CPSF7-205ENST00000439958 LGALS8O00214 317 aa12.52□□□□□ -0.41
CPSF7-205ENST00000439958 PPIHO43447 177 aaKnown RBP12.52□□□□□ -0.41
CPSF7-205ENST00000439958 NDUFB3O43676 98 aa12.52□□□□□ -0.41
CPSF7-205ENST00000439958 LHBP01229 141 aa12.52□□□□□ -0.41
CPSF7-205ENST00000439958 MBPP02686 304 aaPredicted RBP12.52□□□□□ -0.41
CPSF7-205ENST00000439958 KCNJ3P48549 501 aa12.52□□□□□ -0.41
CPSF7-205ENST00000439958 VAMP2P63027 116 aa12.52□□□□□ -0.41
CPSF7-205ENST00000439958 RPL39P5Q59GN2 51 aa12.52□□□□□ -0.41
CPSF7-205ENST00000439958 SHEQ5VZ18 495 aa12.52□□□□□ -0.41
CPSF7-205ENST00000439958 SPAG16Q8N0X2 631 aa12.52□□□□□ -0.41
CPSF7-205ENST00000439958 TMEM217Q8N7C4 229 aa12.52□□□□□ -0.41
CPSF7-205ENST00000439958 DIRC2Q96SL1 478 aa12.52□□□□□ -0.41
CPSF7-205ENST00000439958 RAMP3O60896 148 aa12.51□□□□□ -0.41
CPSF7-205ENST00000439958 CLDN1O95832 211 aa12.51□□□□□ -0.41
CPSF7-205ENST00000439958 COL8A2P25067 703 aa12.51□□□□□ -0.41
CPSF7-205ENST00000439958 DLX1P56177 255 aa12.51□□□□□ -0.41
CPSF7-205ENST00000439958 STUMQ69YW2 141 aa12.51□□□□□ -0.41
CPSF7-205ENST00000439958 RNF126Q9BV68 326 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms