RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 TMEM11P17152 192 aa12.97□□□□□ -0.33
CDC42EP4-202ENST00000439510 HBG1P69891 147 aa12.97□□□□□ -0.33
CDC42EP4-202ENST00000439510 HBG2P69892 147 aa12.97□□□□□ -0.33
CDC42EP4-202ENST00000439510 RNASEH2CQ8TDP1 164 aaKnown RBP12.97□□□□□ -0.33
CDC42EP4-202ENST00000439510 PINX1Q96BK5 328 aaKnown RBP12.97□□□□□ -0.33
CDC42EP4-202ENST00000439510 PYGO2Q9BRQ0 406 aa12.97□□□□□ -0.33
CDC42EP4-202ENST00000439510 SRD5A3Q9H8P0 318 aa12.97□□□□□ -0.33
CDC42EP4-202ENST00000439510 PSENENQ9NZ42 101 aa12.97□□□□□ -0.33
CDC42EP4-202ENST00000439510 ERRFI1Q9UJM3 462 aaPredicted RBP12.97□□□□□ -0.33
CDC42EP4-202ENST00000439510 SMCO3A2RU48 225 aa12.96□□□□□ -0.33
CDC42EP4-202ENST00000439510 SYNGR1O43759 233 aa12.96□□□□□ -0.33
CDC42EP4-202ENST00000439510 IFNA1P01562 189 aa12.96□□□□□ -0.33
CDC42EP4-202ENST00000439510 IL2RGP31785 369 aa12.96□□□□□ -0.33
CDC42EP4-202ENST00000439510 MRPL21Q7Z2W9 205 aaKnown RBP12.96□□□□□ -0.33
CDC42EP4-202ENST00000439510 OR5A2Q8NGI9 324 aa12.96□□□□□ -0.33
CDC42EP4-202ENST00000439510 OR4X1Q8NH49 305 aa12.96□□□□□ -0.33
CDC42EP4-202ENST00000439510 RYDENQ9NUL5 291 aaKnown RBP12.96□□□□□ -0.33
CDC42EP4-202ENST00000439510 TRAV24A0A0B4J272 114 aa12.96□□□□□ -0.34
CDC42EP4-202ENST00000439510 CEBPZOSA8MTT3 80 aa12.96□□□□□ -0.34
CDC42EP4-202ENST00000439510 GALR2O43603 387 aaPredicted RBP12.96□□□□□ -0.34
CDC42EP4-202ENST00000439510 IGKV1-5P01602 117 aa12.96□□□□□ -0.34
CDC42EP4-202ENST00000439510 WIPI1Q5MNZ9 446 aaPredicted RBP12.96□□□□□ -0.34
CDC42EP4-202ENST00000439510 CYB5R2Q6BCY4 276 aa12.96□□□□□ -0.34
CDC42EP4-202ENST00000439510 RNASE11Q8TAA1 199 aaKnown RBP12.96□□□□□ -0.34
CDC42EP4-202ENST00000439510 PSMF1Q92530 271 aa12.96□□□□□ -0.34
CDC42EP4-202ENST00000439510 WDR61Q9GZS3 305 aaKnown RBP12.96□□□□□ -0.34
CDC42EP4-202ENST00000439510 RBKSQ9H477 322 aa12.96□□□□□ -0.34
CDC42EP4-202ENST00000439510 NAT8Q9UHE5 227 aa12.96□□□□□ -0.34
CDC42EP4-202ENST00000439510 MRPS18CQ9Y3D5 142 aaKnown RBP12.96□□□□□ -0.34
CDC42EP4-202ENST00000439510 ZNF407Q9C0G0 2248 aa12.96□□□□□ -0.34
CDC42EP4-202ENST00000439510 MAP1LC3B2A6NCE7 125 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 DEGS1O15121 323 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 COX5BP10606 129 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 IAPPP10997 89 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 CYP2G1PQ6ZSU1 146 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 OR10V1Q8NGI7 309 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 APOBEC3DQ96AK3 386 aaPredicted RBP12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 LINC00470Q9BZP3 86 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 MAP1LC3BQ9GZQ8 125 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 ZNF292O60281 2723 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 DVL1O14640 695 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 IGHV3-9P01782 118 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 PFN1P07737 140 aaKnown RBP12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 JMJD7P0C870 316 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 ARF1P84077 181 aaKnown RBP12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 CLN3Q13286 438 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 IFI44Q8TCB0 444 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 STRADBQ9C0K7 418 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 ZNF552Q9H707 407 aaPredicted RBP12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 CNOT1A5YKK6 2376 aaKnown RBP12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 KNTC1P50748 2209 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 IGKV3D-15A0A087WSY6 115 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 A0A087X0M5 115 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 A0A1B0GX30 115 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 C5orf49A4QMS7 147 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 CD300LBA8K4G0 201 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 MKRN2OSH3BPM6 223 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 CCNOP22674 350 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 JOSD1Q15040 202 aaPredicted RBP12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 COA6Q5JTJ3 125 aaKnown RBP12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 SSX9Q7RTT3 188 aa12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 CENPVQ7Z7K6 275 aaPredicted RBP12.95□□□□□ -0.34
CDC42EP4-202ENST00000439510 KIAA2026Q5HYC2 2103 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 GFRA1P56159 465 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 UNQ6494/PRO21346Q6UXR6 183 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 C17orf78Q8N4C9 275 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 OR5P3Q8WZ94 311 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 TMEM68Q96MH6 324 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 COL25A1Q9BXS0 654 aaPredicted RBP12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 GPR87Q9BY21 358 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 PPP1R14DQ9NXH3 145 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 A0A1B0GWJ7 208 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 HS3ST1O14792 307 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 ZNF737O75373 536 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 TRAPPC6AO75865 159 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 CCL2P13500 99 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 TESK1Q15569 626 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 NCR3LG1Q68D85 454 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 TGIF2LYQ8IUE0 185 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 RDH5Q92781 318 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 OR4C12Q96R67 309 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 SMIM7Q9BQ49 75 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 PRRG4Q9BZD6 226 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 OR1A1Q9P1Q5 309 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 TIMM9Q9Y5J7 89 aa12.94□□□□□ -0.34
CDC42EP4-202ENST00000439510 MRPL33O75394 65 aaKnown RBP12.93□□□□□ -0.34
CDC42EP4-202ENST00000439510 CD55P08174 381 aa12.93□□□□□ -0.34
CDC42EP4-202ENST00000439510 FOLR3P41439 243 aa12.93□□□□□ -0.34
CDC42EP4-202ENST00000439510 MEF2BQ02080 365 aaPredicted RBP12.93□□□□□ -0.34
CDC42EP4-202ENST00000439510 ZNF585BQ52M93 769 aa12.93□□□□□ -0.34
CDC42EP4-202ENST00000439510 TAF15Q92804 592 aaKnown RBP eCLIP12.93□□□□□ -0.34
CDC42EP4-202ENST00000439510 MEGF10Q96KG7 1140 aa12.93□□□□□ -0.34
CDC42EP4-202ENST00000439510 PRO1933Q9H354 126 aa12.93□□□□□ -0.34
CDC42EP4-202ENST00000439510 FREM1Q5H8C1 2179 aa12.93□□□□□ -0.34
CDC42EP4-202ENST00000439510 KBTBD11O94819 623 aa12.93□□□□□ -0.34
CDC42EP4-202ENST00000439510 AMBPP02760 352 aa12.93□□□□□ -0.34
CDC42EP4-202ENST00000439510 TMEM241Q24JQ0 296 aa12.93□□□□□ -0.34
CDC42EP4-202ENST00000439510 C16orf82Q7Z2V1 217 aa12.93□□□□□ -0.34
CDC42EP4-202ENST00000439510 ZNF488Q96MN9 340 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms